Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g01499 ATGAGTGACAAGAGAGAGAATTCAGCTGATGAGGAAGTTGAAACAAAAGAGATGGATGATAGAAGTTTCACTCCAGATAATCAACCACAGGATGAGCGATACATTCACAAAGTTGGGGTTCCACCCAAGCAAAAACTCTACAAAGAAATCAAATCTGCAGTGAAAGAAACATTTTTCCCGGATGATCCTCTCCGTTCATTCAAGGATCAAACTAAGAGGCGGAAATTTATTCTCGGGGTCCAAGCCGTTTTTCCGATTCTTGATTGGGGAAGAACTTATAATTTGACTAAGTTTAGAGGAGATGTTATTTCTGGATTAACAATTGCTAGTCTTTGCATTCCACAGGATATTGGGTATGCCAAGCTTGCGAATTTGCCTCCAGAGTACGGTTTGTACTCCAGTTTTGTTCCACCATTAATCTATGCACTTATGGGTAGCTCAAGAGATATAGCCATTGGTCCAGTTGCTGTTGTTTCTCTCTTGTTGGGGACGCTGCTTCAAGCGGAAATCGATTCTGCTGCAAATCCAGAAGACTACAGGCGGCTGGCATTTACAGCTACATTCTTTGCGGGGATCACACAAGCCACCCTTGGAGTTCTGAGGTTGGGATTCCTTATTGACTTCTTGTCCCATGCTGCCATTGTTGGCTTCATGGGTGGAGCTGCCATCACCATTGCTCTCCAACAACTCAAAGGCTTTCTTGGCATCAAGAAATTCACAAAGAAAACAGATATTATCTCTGTTATGCAGTCAGTATTTGGCACAATCCGACATGGATGGAACTGGCAGACAATAGTGATTGCTGTAGCCTTCCTTGGCTTCCTTCTATTTGCAAAATTCATTGGGAAGAAGAACAAGAGGCTCTTCTGGGTGCCTGCAATTGCTCCACTTATATCTGTGGTACTGTCTACCATTTTGGTATACATCACTCGTGCAGATAAGGAAGGAGTTGCAATTGTGAAACACATAGAGAAAGGAATCAATCCCCCATCTGTGAAAGACTTATATTTATCAGGCCAATACCTTCCAAAAGGGTTGAAGATCGGTATTGTGGCAGGAATGGTAGCACTGACGGAAGCCGTTGCAATTGGAAGAACGTTTGCTTCAATGAAAGACTATCAAATAGATGGGAACAAGGAAATGGTAGCAATGGGACTCATGAATGTTGTTGGTTCAATGACTTCCTGCTATGTAACAACAGGATCATTCTCTAGATCCGCCGTAAATTACATGGCTGGCTGCCAAACTGCAGTCTCCAACATTGTGATGTCTATTGTAGTACTCCTAACTTTGGCATTCCTCACCCCATTGTTCAAATATACTCCAAATGCAATTCTGTCCGCTATCATCATATCCGCTGTGATCAACCTGGTCGACTTGCATGCTGCGAAACTGATTTGGAAGATAGATAAATTCGATTTTGTTGCTTGTATGGGAGCCTTCCTTGGTGTCATCTTTTTCTCTGTTGAGATAGGCCTTCTTATTGCGGTATCCATTTCCTTTGCCAAAATCCTTCTACAAGTTACCAGGCCAAGGACTGCAATTCTTGGAAAGATCCCGAGGACGACTGTTTACCGAAACATACTGCAATATCCTGAAGCAACCCAGGTTCCAGGGGTTTTGATTGTGAGAGTTGATTCGGCAATTTACTTTTCCAACTCCAATTACATCAAGGAAAGGATATTGAGATGGCTGGTCGATGAGGAAGAACAAACGAAAAAGTTATACCAGAACAAAATCCAGTTTCTAATAGTTGAAATGTCACCTGTTACTGACATAGACACTAGTGGCATACATGCTTTGGAAGAGCTAAATGGGAGTCTCAAGAAGAGAGAAATTCAGCTCATTTTAGCAAATCCGGGGCCCGTGGTGATCAACAAACTCCACGCATCGGAATTTGTAGATTTGATAGGCCAAGACCATATCTTCCTCACAGTTGCAGATGCAGTCTCATCTTGTAGTCCAAAGATAATGAACGACGTTTGA 1986 42.55 MSDKRENSADEEVETKEMDDRSFTPDNQPQDERYIHKVGVPPKQKLYKEIKSAVKETFFPDDPLRSFKDQTKRRKFILGVQAVFPILDWGRTYNLTKFRGDVISGLTIASLCIPQDIGYAKLANLPPEYGLYSSFVPPLIYALMGSSRDIAIGPVAVVSLLLGTLLQAEIDSAANPEDYRRLAFTATFFAGITQATLGVLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKKFTKKTDIISVMQSVFGTIRHGWNWQTIVIAVAFLGFLLFAKFIGKKNKRLFWVPAIAPLISVVLSTILVYITRADKEGVAIVKHIEKGINPPSVKDLYLSGQYLPKGLKIGIVAGMVALTEAVAIGRTFASMKDYQIDGNKEMVAMGLMNVVGSMTSCYVTTGSFSRSAVNYMAGCQTAVSNIVMSIVVLLTLAFLTPLFKYTPNAILSAIIISAVINLVDLHAAKLIWKIDKFDFVACMGAFLGVIFFSVEIGLLIAVSISFAKILLQVTRPRTAILGKIPRTTVYRNILQYPEATQVPGVLIVRVDSAIYFSNSNYIKERILRWLVDEEEQTKKLYQNKIQFLIVEMSPVTDIDTSGIHALEELNGSLKKREIQLILANPGPVVINKLHASEFVDLIGQDHIFLTVADAVSSCSPKIMNDV 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 28656522 28660075 + ClCG11G015360.1 Cla11g01499 285321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g01499 661 Pfam STAS domain 531 649 IPR002645 -
Cla11g01499 661 PANTHER SULFATE TRANSPORTER 29 658 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cla11g01499 661 Coils Coil 566 586 - -
Cla11g01499 661 TIGRFAM sulP: sulfate permease 85 649 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cla11g01499 661 MobiDBLite consensus disorder prediction 1 36 - -
Cla11g01499 661 PANTHER SULFATE TRANSPORTER 1.2-LIKE 29 658 - -
Cla11g01499 661 SUPERFAMILY SpoIIaa-like 532 654 IPR036513 -
Cla11g01499 661 CDD STAS_SulP_like_sulfate_transporter 531 646 - -
Cla11g01499 661 ProSiteProfiles STAS domain profile. 530 653 IPR002645 -
Cla11g01499 661 Gene3D STAS domain 510 656 IPR036513 -
Cla11g01499 661 ProSitePatterns SLC26A transporters signature. 127 148 IPR018045 GO:0008271|GO:0008272
Cla11g01499 661 Pfam Sulfate permease family 98 478 IPR011547 GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g00848 Cla-Chr3:11354297 Cla11g01499 Cla-Chr11:28656522 0 dispersed
Cla07g00900 Cla-Chr7:24742834 Cla11g01499 Cla-Chr11:28656522 0 dispersed
Cla09g00680 Cla-Chr9:6486960 Cla11g01499 Cla-Chr11:28656522 0 dispersed
Cla11g00117 Cla-Chr11:1459483 Cla11g01499 Cla-Chr11:28656522 0 dispersed
Cla09g01494 Cla-Chr9:28880621 Cla11g01499 Cla-Chr11:28656522 0 transposed
Cla09g01967 Cla-Chr9:37269096 Cla11g01499 Cla-Chr11:28656522 5.62E-118 transposed
Cla11g01499 Cla-Chr11:28656522 Cla03g00847 Cla-Chr3:11307918 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g01499 K17470 - csv:101207370 1197.57