Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g01531 ATGGGAGCTGAATCAGGGCTTGCAATGTTTTGTGGAATAATTCATAAAATAAAACCCTACTTAGCTATGATTTCCTTGCAATTTGGATATGCAGGGATGTATATTGTCACGATGCTTTGTCTTAAGAAGGGCATGAACCATTACGTTCTCGCCGTTTATCGACACGTCGTTGCCACCATTGTCATCTCTCCCTTCGCCATCGTCCTCGAAAGAAAAATAAGGCCAAAGATGACATTCCCAATCTTTGCACGAATATTGCTCCTCGGTTTTCTCGAGCCAGTGTTGGATCAAAATCTATACTATGTGGGTTTGAAACTTACTTCAGCAACATTCACTTCTGTCACCATCAATATTCTCCCTGCAGTAACCTTCATTATGGCTCTCATTTTCAGCTCAACGACTGTGTCGGCCATTTTAATTGATTGGTCGATTTCAATTAATACTCTAGATATTCAGAATCAATTCTTGAAATTTCTGGATTCTAATTCATGGAATGGATTAACCAGGCTAGAAAGTGTGAATTTGAAGAAGATTCGTAGCATCGCGAAGGTGGTAGGAACATTGGTGACAATCGGCGGAGCAATGGTGATGACTCTATACAAAGGACCAATCGTCGACATATTCCACGGCCATGGACGCCACGCCGCCCACCACAGTACTGAGTCCGCCGACCAGCACTGGGTCCTCGGAACCCTCATGCTTCTCGGCAGCATCGTCGGCTGGTCCGGTTTCTTCATCTTGCAATCCTTCACACTGAGGAAATACCCGGCGGAGCTGTCGTTGACCGCCCTGATATGCGTGGCCGGCACGGTGGAGGGCTCCATTGTGACGCTTATTATGGAGCGTGACTTTAGCGTGTGGGCCATTGGCTGGGACTCTCGCCTTCTTGCCGCTGTTTATACCGGTGTGATATGCTCTGGACTTGCATATTACATACAAGGAGTGGTGATTCGGGAACGTGGCCCAGTTTTTGTTACCTCTTTTACCCCTCTCTGCATGATTATTACCGCCGTCCTTGGCTCCATTGTTTTGGCTGAGCAAATTCACCTTGGAAGCATAATCGGAGCTATTTTCATAGTGATGGGGCTATACTTAGTGGTGTGGGGCAAAGCCAAGGACCATCTAAACAAATTGACGAATCAAAAAAGCGGCGCCACCACCACCGAATTACCGATCACCGCCGAGCCGGAAACCACCGCCACCGCCGAGCGTTGTTCTTCCAAGGCTCCACCGGCGTGA 1239 47.7 MGAESGLAMFCGIIHKIKPYLAMISLQFGYAGMYIVTMLCLKKGMNHYVLAVYRHVVATIVISPFAIVLERKIRPKMTFPIFARILLLGFLEPVLDQNLYYVGLKLTSATFTSVTINILPAVTFIMALIFSSTTVSAILIDWSISINTLDIQNQFLKFLDSNSWNGLTRLESVNLKKIRSIAKVVGTLVTIGGAMVMTLYKGPIVDIFHGHGRHAAHHSTESADQHWVLGTLMLLGSIVGWSGFFILQSFTLRKYPAELSLTALICVAGTVEGSIVTLIMERDFSVWAIGWDSRLLAAVYTGVICSGLAYYIQGVVIRERGPVFVTSFTPLCMIITAVLGSIVLAEQIHLGSIIGAIFIVMGLYLVVWGKAKDHLNKLTNQKSGATTTELPITAEPETTATAERCSSKAPPA 412
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 28947910 28951293 + ClCG11G015670.2 Cla11g01531 285353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g01531 412 MobiDBLite consensus disorder prediction 387 405 - -
Cla11g01531 412 PANTHER WAT1-RELATED PROTEIN 13 135 - -
Cla11g01531 412 PANTHER WAT1-RELATED PROTEIN 168 392 - -
Cla11g01531 412 MobiDBLite consensus disorder prediction 387 412 - -
Cla11g01531 412 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 137 - -
Cla11g01531 412 Pfam EamA-like transporter family 229 367 IPR000620 GO:0016020|GO:0016021
Cla11g01531 412 Pfam EamA-like transporter family 21 135 IPR000620 GO:0016020|GO:0016021
Cla11g01531 412 PANTHER WAT1-RELATED PROTEIN 13 135 IPR030184 GO:0016021|GO:0022857
Cla11g01531 412 PANTHER WAT1-RELATED PROTEIN 168 392 IPR030184 GO:0016021|GO:0022857
Cla11g01531 412 SUPERFAMILY Multidrug resistance efflux transporter EmrE 288 371 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla10g01563 Cla-Chr10:31033344 Cla11g01531 Cla-Chr11:28947910 2.58E-115 dispersed
Cla11g01284 Cla-Chr11:26371717 Cla11g01531 Cla-Chr11:28947910 7.63E-113 dispersed
Cla11g01531 Cla-Chr11:28947910 Cla08g00578 Cla-Chr8:17571583 1.19E-136 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g01531 - - csv:101216002 653.284