Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g01542 ATGGCGGAGATAGCGGTGTTCGACGGAGAAGCGGCGGAGAGAGTGGTGGCGGAGCTGAGGGAGAGCTATAATTCCGGCAAAACGCGAAGCTACGAATGGAGAGTGAATCAATTGAAAAATCTGTTGAAATTGGTTTGTGAAAACGAAGAAGAGATGGTTCAAACCGTTCATTCCGATCTTTATAAACCCGAATTTGAAGCCTTCGCTCATGAGGACAAAACCCAAAACGCCACACGACTTCTTGGTGGCATCGGAAATGGAAAAATGCGAATCGGAGGACGACACCTCTTTCTTAACGATTCGTCTTCTCCCTGGAAATCCACTCCCGTAATTCCCTCAACCAAGAATCGTTCGAATCAATTCCTACATTACAAGTTTCCTCTCTCTGTGTATTCTGATTCTTGCCGTCGGAGGCGGCGGCGATTCGTGATGTCGGAATCGGAGTCGGAGTTGGAGGTGTTCGACACAGCGGCGGCGACGGATTTGGTGAAGAAACTTAGACGTAGTTTTACTACCGGCAGGACTCGGAGCTATGAGTGGAGAGTGTCGCAGCTTGAGAGCCTCTTGAAGCTTAGCGTTGAGCATGAGGAAGATCTCTGCGAAGCGCTTCGCTCTGACCTTTCGAAGCCTGTGTTGGAATCTATCGTTCATGAGATAGCTCTATTAAAAGGTTCGTGTAAATTGGCACTTAAAGAACTCAGGCGTTGGATGGCACCAGAAAAGGTTAAAACTTCAATTACCACATTTCCTTCGTCTGGAGCAATTGTTCCAGAACCTTTCGTGTTATCTCTCGATCCAGTTGTTGGAGCAATAGCAGCTGGCAATGCTGTGGTTCTAAAGCCATCAGAAATTTCCCCAAGAACATCATCTTTGATGGCAAAACTTTTGGCGAAATATTTGGATACATCTGCTGTAAAAGTTGTTGAGGGTGCTGTTCCCGAAACTAATGCTTTGTTGGAGCAGAAGTGGGACAAAATATTTTACACAGGCAATGGAAGAGTGGGGCGGATAGTGATGGCAGCTGCTGCCAAGCATCTTACGCCAGTTGTTTTAGAGCTTGGAGGAAAATCTCCAGTAGTAGTTGATTCAGAAATCAATTTACAAGTGGAGTCTCTTAAACAAGAACTGGAGAGATTTTATGGAAAGAATCCGTTGGAAACTAAAGATTTATCTCGCATTGTGAATGCTAAACACTTTGATCGCTTGACAAGGCTCTTAGATGATGATAAAGTTTCTGGCAAGATCGTGCATGGAGGTGAAAAGGACAAAACAAAGCTACAGATTGCTCCCACCCTCTTATTGGATGTCCCTCGAGACTCACTAATTATGACGGAGGAGATATTTGGTCCCCTACTTCCCATTGTCACGGTCGACAAGGTGGAGGACAGCTTCGAAATAGTGAACTCGGGCACAAAGCCACTTGCAGCATATTTATTTACTAACAAAAAGAAGCTCAAGGAACGATTCGTGGCTTGTATCTCTGCAGGGGGTGTGGCCATCAATGAAACCGCCTTACATCTGACGATTAGCACGTTACCGTTCGGAGGAGTTGGAGAGAGTGGAATGGGAGCTTACCATGGAAAGTTCTCCTTTGATGCATTTAGCCATAAGAAGGCCGTTCTTTATCGAAGTTTCGCAGGCGATGCGCCGATGAGATATCCGCCATACACAAAGGGAAAGCTCAGAATTCTCAAGGCTCTTCTTGGAGGTGGCATATTGGGACTCATTCGTGCTTTACTTGGAACACTCCAATCCGTTACTACAACTTCTCCCTCTTTCTCTGTATATACTGATAGTTGTCGGCGGCGGCGACTCGCGATGTCGGAAACGAAGGTGTTCGATGCGGCGGCGGCGACGGAGTTGGTGAAGGAACTGAGAGGTAGTTTTGGCTCCGGCAACACTCGGAGCTACGAGTGGAGAGTGGCGCAGCTTGAGAGTCTCTTGAAGCTCAGCGTTGACCATGAGGAAGATATTTGCGATGCGCTTCGCTCTGACCTCTCCAAGCCTGCGTTGGAATCCGTTATTCATGAGATATCTATGGTAAAAAGTTCGTGTAAATTGGCACTTAAAGAACTCAGAAATTGGATGACACCAGAGAAGGTTCAAACTACAATTACCAGTTTTCCTTCGTCTGCTGCAATTGTACCAGAACCTTTGGTTGTTGGAGCAATAGCAGCTGGTAATGCTGTGGTTCTAAAGCCATCAGAAATTTCTCCAGCAACAGCATCTTTAATAGCAAAACTTCTTGAGAAGTATTTGGATACGTCTGCTGTAAAAGTTGTTGAGGGTGCTATTCCTGAAACTAGTGCTTTGCTGGAGCAAAAGTGGGACAAAATATTTTACACAGGCAATGGAAGAGTGGGGCGAATAGTGATGGCAGCTGCTGCCAAGCACCTTACGCCAGTTGTTTTAGAGCTTGGAGGAAAATCTCCAGTAGTAGTTGATTCAAAAATCAATTTACAAGTTGCCTGTAGGCGAATTATATCTGGTAAATGGGGTGGTAACAATGGACAAGCATGTGTTTCTCCTGATTACATCATAACTACGAAAGAATTTGCTCCAAAATTGGTGGAGTCTCTGAAACAAGAACTGGAGAGATTTTATGGAAAGAATCCGTTGGAATCTAAAGATATATCTCGCATTGTGAATGCTAGCCACTTTAATCGCTTGACCAAGCTCTTAGATGATGATGAAGTTTCTAGCAAGATTGTTCATGGAGGTGAAAAGGACAAAACCAAATTACAGATTGCTCCCACCCTCTTATTGGATGTCCCTCGAGACTCTTTGATTATGACGGAGGAGATATTTGGTCCCTTGCTTCCCATTATCACGGTAGACAAATTGGAGGACAGCTTCGAAATAGTGAATTCGGGCTCAAAGCCACTTGCAGCATATTTATTTACCAACAACAAAAAGCTCAAGGAACAGTTCGTGGCTTGTATCTCTGCAGGCGGCGTGGTTATCAATGACACCACCTTACATCTAGCTGTTAGCACACTACCATTTGGAGGAGTAGGGGAGAGTGGAATGGGATCTTGCCATGGGAAGTTTTCATTTGATGCATTTAGCCATAAGAAAGCTGTTCTTTATCGAAGTTTTGTAGGCGACGTGCCGATGCGATACCCACCTTACACAAACGGAAAGCTTAGATTTCTCAAAGCTCTTCTTGGAGGTGGCATTTTGGAGCTCATTCGTGCCCTTCTTGGTTGGTCGTAA 3216 45.12 MAEIAVFDGEAAERVVAELRESYNSGKTRSYEWRVNQLKNLLKLVCENEEEMVQTVHSDLYKPEFEAFAHEDKTQNATRLLGGIGNGKMRIGGRHLFLNDSSSPWKSTPVIPSTKNRSNQFLHYKFPLSVYSDSCRRRRRRFVMSESESELEVFDTAAATDLVKKLRRSFTTGRTRSYEWRVSQLESLLKLSVEHEEDLCEALRSDLSKPVLESIVHEIALLKGSCKLALKELRRWMAPEKVKTSITTFPSSGAIVPEPFVLSLDPVVGAIAAGNAVVLKPSEISPRTSSLMAKLLAKYLDTSAVKVVEGAVPETNALLEQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSEINLQVESLKQELERFYGKNPLETKDLSRIVNAKHFDRLTRLLDDDKVSGKIVHGGEKDKTKLQIAPTLLLDVPRDSLIMTEEIFGPLLPIVTVDKVEDSFEIVNSGTKPLAAYLFTNKKKLKERFVACISAGGVAINETALHLTISTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYRSFAGDAPMRYPPYTKGKLRILKALLGGGILGLIRALLGTLQSVTTTSPSFSVYTDSCRRRRLAMSETKVFDAAAATELVKELRGSFGSGNTRSYEWRVAQLESLLKLSVDHEEDICDALRSDLSKPALESVIHEISMVKSSCKLALKELRNWMTPEKVQTTITSFPSSAAIVPEPLVVGAIAAGNAVVLKPSEISPATASLIAKLLEKYLDTSAVKVVEGAIPETSALLEQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSKINLQVACRRIISGKWGGNNGQACVSPDYIITTKEFAPKLVESLKQELERFYGKNPLESKDISRIVNASHFNRLTKLLDDDEVSSKIVHGGEKDKTKLQIAPTLLLDVPRDSLIMTEEIFGPLLPIITVDKLEDSFEIVNSGSKPLAAYLFTNNKKLKEQFVACISAGGVVINDTTLHLAVSTLPFGGVGESGMGSCHGKFSFDAFSHKKAVLYRSFVGDVPMRYPPYTNGKLRFLKALLGGGILELIRALLGWS 1071
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 29112558 29128705 + ClCG11G015830.1 Cla11g01542 285364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g01542 1071 PANTHER ALDEHYDE DEHYDROGENASE 608 1071 - -
Cla11g01542 1071 PANTHER ALDEHYDE DEHYDROGENASE 148 369 - -
Cla11g01542 1071 SUPERFAMILY ALDH-like 620 1045 IPR016161 GO:0016491
Cla11g01542 1071 PANTHER ALDEHYDE DEHYDROGENASE 608 1071 IPR012394 GO:0006081
Cla11g01542 1071 PANTHER ALDEHYDE DEHYDROGENASE 148 369 IPR012394 GO:0006081
Cla11g01542 1071 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 627 1023 IPR016162 GO:0016491
Cla11g01542 1071 PANTHER ALDEHYDE DEHYDROGENASE 369 581 IPR012394 GO:0006081
Cla11g01542 1071 PANTHER ALDEHYDE DEHYDROGENASE 5 71 IPR012394 GO:0006081
Cla11g01542 1071 Pfam Aldehyde dehydrogenase family 614 1028 IPR015590 GO:0016491
Cla11g01542 1071 Pfam Aldehyde dehydrogenase family 369 540 IPR015590 GO:0016491
Cla11g01542 1071 Pfam Aldehyde dehydrogenase family 155 368 IPR015590 GO:0016491
Cla11g01542 1071 SUPERFAMILY ALDH-like 161 555 IPR016161 GO:0016491
Cla11g01542 1071 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 139 354 IPR016162 GO:0016491
Cla11g01542 1071 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 804 811 IPR029510 GO:0016491
Cla11g01542 1071 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 351 358 IPR029510 GO:0016491
Cla11g01542 1071 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 809 1008 IPR016163 GO:0016620
Cla11g01542 1071 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 355 547 IPR016163 GO:0016620
Cla11g01542 1071 PANTHER ALDEHYDE DEHYDROGENASE 5 71 - -
Cla11g01542 1071 PANTHER ALDEHYDE DEHYDROGENASE 369 581 - -
Cla11g01542 1071 SUPERFAMILY ALDH-like 2 73 IPR016161 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g00849 Cla-Chr7:23698655 Cla11g01542 Cla-Chr11:29112558 1.52E-06 dispersed
Cla11g01542 Cla-Chr11:29112558 Cla06g01634 Cla-Chr6:29857602 3.25E-21 dispersed
Cla11g01542 Cla-Chr11:29112558 Cla02g01637 Cla-Chr2:31170876 2.87E-23 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g01542 K00128 - csv:101219569 836.639