Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g01560 ATGCAGTTATATCATCATCCATACTCTTTGGATAGCCAGAAGGTGAGACTTGCCTTGGAAGAGCAAGGCATTGATTACACATCGTATCATGTCAATCCCATCACGGCCAAGAACATGGACTCCTCATTCTTCAAGATCAACCCAAGTGCAAAACTTCCTGTCTTTCAAAATGGTTCCCACGTCATTTTCGACACAATCGAGATAATTCAGTATATAGAGAGAATTGCAGTTGTCTCCTCAGGGATCGATGACGTAATGCCGAGTAGCAGAGAAGTCATTGAATGGATGCATAAGATACAAGAATGGAATCCAAAATTTTTCACTCTTGCCCACATCCCCGAGAAGTACCGCCTTACTGTCACCAGATTTGTAAGGCGGGTGGTGATCGCTCGGATGGCTGAAACTCCCGAAATGGCTGCTGCTTACCATCGTAAGCTTAGAGAAGCATACGAAACTGAAGACAAATTGAAAAACAAAACTGTTGTCAAACAAAGCACTGAACATCTAGTTAGACTTCTTGATGAAATCGAATCGAAACTAGGCGAAACTTCTTACTTGGCAGGGGAAGAGTTTACCATGGCTGATGCAGTGTTCATTCCAGTGCTGGCTCGAATCGTGCTGTTGAAGCTGGCAGACGAGTATATAGGCAGCAGACCGAACATTGCAGAGTATTGGATCTTGGTGCAGCAGAGGCCAAGCTACAAGAAGGTAATTGGGAAGTATTTCAATGGATGGAGAAAGCACAAAACACTTCTGAAAACGTGGTGCTTTGTTCATATCAGAACCTTGCTGAGGAGATATTGA 804 43.66 MQLYHHPYSLDSQKVRLALEEQGIDYTSYHVNPITAKNMDSSFFKINPSAKLPVFQNGSHVIFDTIEIIQYIERIAVVSSGIDDVMPSSREVIEWMHKIQEWNPKFFTLAHIPEKYRLTVTRFVRRVVIARMAETPEMAAAYHRKLREAYETEDKLKNKTVVKQSTEHLVRLLDEIESKLGETSYLAGEEFTMADAVFIPVLARIVLLKLADEYIGSRPNIAEYWILVQQRPSYKKVIGKYFNGWRKHKTLLKTWCFVHIRTLLRRY 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 29326605 29329959 - ClCG11G016010.1 Cla11g01560 285382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g01560 267 Gene3D Glutaredoxin 1 75 - -
Cla11g01560 267 SFLD Glutathione Transferase (cytosolic) 1 231 IPR040079 -
Cla11g01560 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 118 251 IPR010987 -
Cla11g01560 267 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
Cla11g01560 267 CDD GST_N_family 1 73 - -
Cla11g01560 267 SUPERFAMILY GST C-terminal domain-like 136 241 IPR036282 -
Cla11g01560 267 Pfam Glutathione S-transferase, N-terminal domain 3 74 IPR004045 -
Cla11g01560 267 Gene3D - 117 238 - -
Cla11g01560 267 SFLD Main (cytGST) 1 231 - -
Cla11g01560 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Cla11g01560 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364
Cla11g01560 267 Pfam Glutathione S-transferase, C-terminal domain 161 209 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla09g00567 Cla-Chr9:5224630 Cla11g01560 Cla-Chr11:29326605 8.09E-11 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g01560 K22077 - csv:101222476 501.13