Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g01631 ATGATTATGGAGCAGTTAAGATACTGCCTCCTTCAAATCTTTGTTGCTTTAGCTATTTCATTTCTGGTTTCTGCACAGGATCAATCAGGATTCATTAGCATCGACTGTGGAAGTTCAGAGAATTCAAGCTACAAAGATAGTGTAACAGACATAAAGTACATTTCCGATGTAAACTTCACACAAACTGGAATAAGTAAGAGCATATCATTAGATTTCAACACCACCACTCTTCCACAGCAGTTCTGGTATGTTAGAAGCTTTCCTGAAGGAGAGAGAAACTGTTACACCATAAAGCTTGCTCAGGGTAAAGGTTACAAGTATTTGATCAGAGCGAGTTTCATGTACGGAAACTATGATGGCCAAGGTACAGCGCCGGCTTTCGATCTGTACATGGGTGTTAATAAATGGGATTCAGTAATACTGCACAATGAATCCAGCATCATAATCAAAGAAGTTATACATGTACTTCCTACATCTTCCATATACATTTGTCTGGTCAATACTGGCTTTGGATCACCTTTTATATCAGCATTGGAGCTTAGGCTTTTGAAAAATGCAAGTTATGTCACTGATTTTGATTTGCTAGCTCTCCACAGACGGTTGGATGTTGGTTCAACGACCAACAGAACCATCAGGTACAATGATGATTTTTCTGATAGGATCTGGATGCCCTATAACTTTCTTAACTATAAAATTATAAGTACTTCATCCACAGTTGATTCAGGAGGTAGCAATTCTTATAATCTACCAAGAATTGTCATGAGCACTGCCATCACAACCTATAATGCCAGTGATCCTCTAGAATTTCACTGGGTTCCTGAAGATCCCAGTACAAAATATCATATATTCTTGCACTTTGCTGATTTGGAAAAGCTCCAAGCTAACCAATTAAGGGAATTTAACATCTATCAAAATGGGAATTATCTTCATGGACCATTCTCTCCTGATTACTTGCAGTCAACTACATTGTCTAGCATATCCCCAATGAGTGGAGATGACATTGCATTTTCATTATCAAAAACTAATGCATCAAATCTTCCACCCATCCTCAATGCACTTGAAATCTACATCGTGCTTGACACATCGCAATCACGCACCGATGAACAGGACATTACAGCCCTGATGAACATCAAATCCTTTTATGGATTGAGAAAGAATTGGCAGGGTGATCCATGCCAGCCAAAATCCTTCTTGTGGCTTGGTCTTAATTGTAGCTATGATGACCAGAGTCCTAATAGAATCACCTCCTTGAACTTGTCTTCGAGCGGATTGGTGGGGGAAATAGCTACCTATGTGTCTGAGCTCACATCGTTACAATATTTGGATTTGTCAAACAATAGCTTGAGTGGACCGGTGCCTGGTTTTCTATCCAAATTGCAGTCCTTGAAAGTTTTAGACTTGAGGGACAATCCTCTCCTTGGTTCTATACCAAGTGAACTCATGGATAGATCGAAGAACGGATCCCTTTCAATAAGGGTTGGAGGAAACATGGATTTTTGTGCTTCATCTTCTTGTCAAAAGAAGAAAAAGAGTTACGTTATTACAATTGTAGCAATAGTTTCATCATTGTTTGTCCTCTTAGCTGCAGCAGCAGTATGGATAATATTATGGAGAAAACGAGCCCGAAAACAGCCTGTCATAAGACTCGGATCACTAGAGGAGAAAAAACAGCAGCTATCTTACTCTCAAATAAAGCGTATTACAAACAACTTTGCGAGAAAAATTGGAGAAGGAGGTTTTGCAAAAGTATTCCTCGGTTACTTGGATAATACTCAAGTCGCCGTGAAGGTCCTTAAGTCTTCGGTTCAAGGTTATAAAGAATTTGAAGCAGAGGTTAAACTTTTGTTGAGAATTCATCATCGAAACTTGACGAGCCTTATCGGATACTGCTGTGAAAAAACCAACCTGGTTCTAATTTATGAGTACATAAATAATGGCAACTTAAAAGAGCATCTATCAGGTGATAAAGTTGGTGTCCTCAGTTGGGAGGAAAGGATGCAAGTAGCAGTCAATGCAGCGCAAGGGTTGGAGTATCTGCATCATGGTTGTAAGCCACCAATTGTTCACAGAGATGTGAAGTCTGCAAACATCCTTTTGAATGACAGATTCCAAGCTAAAATAGCTGATTTTGGTCTATCCAAGAGTTTTCCGACCGAAAGCCATACTCATTTGACAACTGTTGTTGCAGGGACCGATGGTTATCTTGACCCTGAGTATTACGCAACTGGCTGGTTGACTGAGAAAAGCGATGTATATAGTTTTGGAGTTCTTATATTGGAAGTAGTCACTTCCCGTCCAGTCCTCATGATTGATAGAGCTTCTTCACAGAAATATCATATAAGCCAATGGGTAATGCACTTGATGAAAACAGGTGATATAAGGAGCATCGTTGATCAGAGGGTGAGGGAAAACTTCGACTTGAATTCTGCTTGGAAGGCAGTGGAGATTGCTATGAAATGTTTGTCATTGAATTCCATTGATAGGCCAAACATGAAAGAGGTAGTTGCGGTGTTGAGTGAGTGTTTGGCGTTAGAGAAAGCTCGAAAACGAAGAAACGTTGATTCTAATATGGGAAAATCAAATGCAGTTAGTAGGAATTTCAGAGAGAGCGAAGTAACACCTTTTGCTAGATAG 2634 39.67 MIMEQLRYCLLQIFVALAISFLVSAQDQSGFISIDCGSSENSSYKDSVTDIKYISDVNFTQTGISKSISLDFNTTTLPQQFWYVRSFPEGERNCYTIKLAQGKGYKYLIRASFMYGNYDGQGTAPAFDLYMGVNKWDSVILHNESSIIIKEVIHVLPTSSIYICLVNTGFGSPFISALELRLLKNASYVTDFDLLALHRRLDVGSTTNRTIRYNDDFSDRIWMPYNFLNYKIISTSSTVDSGGSNSYNLPRIVMSTAITTYNASDPLEFHWVPEDPSTKYHIFLHFADLEKLQANQLREFNIYQNGNYLHGPFSPDYLQSTTLSSISPMSGDDIAFSLSKTNASNLPPILNALEIYIVLDTSQSRTDEQDITALMNIKSFYGLRKNWQGDPCQPKSFLWLGLNCSYDDQSPNRITSLNLSSSGLVGEIATYVSELTSLQYLDLSNNSLSGPVPGFLSKLQSLKVLDLRDNPLLGSIPSELMDRSKNGSLSIRVGGNMDFCASSSCQKKKKSYVITIVAIVSSLFVLLAAAAVWIILWRKRARKQPVIRLGSLEEKKQQLSYSQIKRITNNFARKIGEGGFAKVFLGYLDNTQVAVKVLKSSVQGYKEFEAEVKLLLRIHHRNLTSLIGYCCEKTNLVLIYEYINNGNLKEHLSGDKVGVLSWEERMQVAVNAAQGLEYLHHGCKPPIVHRDVKSANILLNDRFQAKIADFGLSKSFPTESHTHLTTVVAGTDGYLDPEYYATGWLTEKSDVYSFGVLILEVVTSRPVLMIDRASSQKYHISQWVMHLMKTGDIRSIVDQRVRENFDLNSAWKAVEIAMKCLSLNSIDRPNMKEVVAVLSECLALEKARKRRNVDSNMGKSNAVSRNFRESEVTPFAR 877
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 30002694 30007974 + ClCG11G016710.2 Cla11g01631 285453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g01631 877 SUPERFAMILY L domain-like 373 481 - -
Cla11g01631 877 Gene3D Ribonuclease Inhibitor 369 492 IPR032675 -
Cla11g01631 877 Pfam Leucine rich repeat 413 472 IPR001611 GO:0005515
Cla11g01631 877 PRINTS Leucine-rich repeat signature 438 451 - -
Cla11g01631 877 PRINTS Leucine-rich repeat signature 459 472 - -
Cla11g01631 877 CDD STKc_IRAK 575 840 - -
Cla11g01631 877 Gene3D Phosphorylase Kinase; domain 1 550 642 - -
Cla11g01631 877 PANTHER OS07G0107800 PROTEIN-RELATED 4 877 - -
Cla11g01631 877 SMART serkin_6 569 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g01631 877 ProSiteProfiles Protein kinase domain profile. 569 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g01631 877 ProSitePatterns Protein kinases ATP-binding region signature. 575 596 IPR017441 GO:0005524
Cla11g01631 877 PANTHER LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE PROTEIN-RELATED 4 877 - -
Cla11g01631 877 ProSitePatterns Serine/Threonine protein kinases active-site signature. 687 699 IPR008271 GO:0004672|GO:0006468
Cla11g01631 877 SUPERFAMILY Protein kinase-like (PK-like) 554 838 IPR011009 -
Cla11g01631 877 Pfam Malectin-like domain 34 357 IPR024788 -
Cla11g01631 877 Pfam Protein kinase domain 572 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g01631 877 Gene3D Transferase(Phosphotransferase) domain 1 643 866 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g02627 Cla-Chr5:37465029 Cla11g01631 Cla-Chr11:30002694 1.77E-146 dispersed
Cla09g00035 Cla-Chr9:361115 Cla11g01631 Cla-Chr11:30002694 1.13E-09 dispersed
Cla09g00038 Cla-Chr9:377123 Cla11g01631 Cla-Chr11:30002694 2.44E-111 dispersed
Cla10g01958 Cla-Chr10:35410589 Cla11g01631 Cla-Chr11:30002694 2.24E-141 dispersed
Cla11g01631 Cla-Chr11:30002694 Cla09g00030 Cla-Chr9:339249 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80961 PF12819 Malectin_like 2.00E-110 CL0202 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g01631 - - csv:101209804 1548.87