Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g01668 ATGAGCCAGGAAGACAAATCCGCCACTGTGGGTGTCGTCGTCCACCACCATCACGAATCCAATTCCGGCCACCCTCACTACGGAACCTTCCAAGGCGTCGCTAACTATCCTCCCGTCGGATTTCCCCAGCCTACTCGCCCGCCTGGTGTCTCCGACTCCGACGATCCTTCTCAATATCAGCAATATGCTCATGGCTATCAAGCTGTCCCCGGATATGCTATTGTTGAAGGAAGACCAGTGAGAGAGCAGCGCCTTCCTTGCTGCGGTATTGGCATCGGGTGGTTCCTGTTTATTATTGGTTTCTTCCTTCCTGCTATCCCATGGTATGCTGGAGCAGTTCTTATACTATGTGGCAGGGTAGACTACCGTGAGAAACCAGGATATGTTGCTTGCTCAATTGCTGCTGTTCTTGCCACAGTTGCAATTATTTTCGGTGCCACAAAGGAAGCCGATGTCTGGCCGAAGAAGTTAGAGAAGCTTTTAAGACGGCAAGGATTCGCCGGCAATTCGTACCGGATTCTCTACGGCGACTTGAAGGACGAAGCCGCCATGAGAGAGCAGAAGGATCTAGATGTAATGCCTTTTTTACAAAATATGGCTGCAGATATGATATCTCGAACTGCATTTGGGAGTAGCCATGAGAAAGAAAAAAAGATCTTCAAGCTTCAAACTGAACTAGCTAAATTGGTGGCTCAATCTGCTTTTGGAATTTATATTCCAGGATGGAGTGATCTACTAAGCATTCTCATGGAATCCCATTTCAATGAAATTAAACAACATGGAAATAATAAAGACATTGGAATGAGCAAAGAAGATGTTATTACTGAATGCAAGCTTTTCTGTATTGTTGAGTTCATACTCAGAATGGCAAGAACGAGCGAGAGCAGAGCAGGACTTATGTTAGGCTTACCGATTGTTCTTGTCCAACATGATCCTAAGCTACGGGGAGAAGATGCATATGAATTTAAACCAAAAAGATTTTCTGCCGGAGTTTGGAAAGGAACAAAGAATCCAATTGCTTTTCTACCATTTGGTTGGGGTCCTCGAATATGCATAGGATTAAACTTTGCCATGATTGAAGCGAAAATGACATTATCAATGGTCCTGCAACGATTTTCATTTAAGCTTTCATCATCATATACACATGCTCCCACCGTTGTTCCTAAGAAATTAGAGAAGGTTTTAAGAGAGCAAGGATTCGCCGGAAATTCTTACCGGATTCTCTACGGCGACTTGAAGTTCAGAGCTGCCATGAGAGAGCAGGCACTGTCCAAGCCCATGAATTTCTCCAATGATATCGCTCCACGTGTCATTCCATCTATTCATCATACCATCCAGAATTATGGCAAAAATTCATTTATGTGGCTTGGACCCATACCAAGAGTGCACATCATGGACCCTGAACAACTTAAAATTGTGTTTTCATTGATCAATGATTTCCAAAAGCCAACTATAAATCCCTTTGCCAGGTTGCTTGCAGATGGGATTTTAAATCATGAAGGACCAAAATGGGTCAAACACAGAAAGATAATCAATCCTGCATTTCATTTACAAAAGCTTAAGGATATGGTACCAGCATTCTATCATAGTTGTAACGAGATGATTAGCAAATGGGAAAACATGGTCTTTGTAGAAGAATCTTGTGAGTTAGATGTCATGCCTTACCTACAAAATATGACTGCTGATGTGATTTCTCGAACTGCATTTGGTAGTAGCTATGAGAAAGGGAAAAAGATCTTCAAGCTTCAAACTGAACTAGCTGAATTGGTGATTCAATCTACCTTAGGGGTTTATATTCCAGGATGGAGATTCCTACCCACAAAGTCAAACAATAAAATGAAAGAGATAAGTAATGAGATAACAACTTTGATCTTGGGTATTATGAATGAAAGGGAAAAGTCTATGAAGGCAGGTGAAGCTATACAAACTGATCTACTTAGCATTCTCATGGAATCCAATTTGAATGAAATTAAACAACATGGAAACAATAAAGACATTGGAATGAGCATAGAAGATGTTATTGCTGAATGCAAGCTTTTCTATATTGCTGGTCAAGAAACTACAGCTACATTACTAGTTTGGACGATGGTATTGTTGAGTTCATACTCAGAATGGCAAGAGCAAGCAAGAGCAGAGGTCTTTGAGATCTTTGGTAACAAGAAACCAGATTATGATGGCTTAAGTCAACTAAAAGTTGTAACTATGATCTTGAACGAGGTTCTTAGGTTATACCCACCAGTGAGTATGTTTGGTCGTTTTGTTAAAAAAGAAACACGACTTGGAAAATTGACTTTACCAGCCGGAGTGATGTTGGCCTTACCAACTATTCTTATCCAACGTGATCCTGAGCTATGGGGAGAAGATGCAAATGAATTTAAACCAGAAAGATTTTCTAAGGGAGTTTCTAAAGCAACAAAAAATCCAAGTGCTTTTGTACCATTTGGTTGGGGTCCTCGAATATGCATAGGACTAAACTTTGCCATGATTGAAGCAAAGTTGGCATTATCAATGATCCTTCAACGCTTCTCATTTGAGCTTTCGTCATCGTATACACATGCTCCCACCGTCACCATAACAACGCAACCTCAACATGGAGCTCATATCATCCTACATAAACTGTAG 2622 41.08 MSQEDKSATVGVVVHHHHESNSGHPHYGTFQGVANYPPVGFPQPTRPPGVSDSDDPSQYQQYAHGYQAVPGYAIVEGRPVREQRLPCCGIGIGWFLFIIGFFLPAIPWYAGAVLILCGRVDYREKPGYVACSIAAVLATVAIIFGATKEADVWPKKLEKLLRRQGFAGNSYRILYGDLKDEAAMREQKDLDVMPFLQNMAADMISRTAFGSSHEKEKKIFKLQTELAKLVAQSAFGIYIPGWSDLLSILMESHFNEIKQHGNNKDIGMSKEDVITECKLFCIVEFILRMARTSESRAGLMLGLPIVLVQHDPKLRGEDAYEFKPKRFSAGVWKGTKNPIAFLPFGWGPRICIGLNFAMIEAKMTLSMVLQRFSFKLSSSYTHAPTVVPKKLEKVLREQGFAGNSYRILYGDLKFRAAMREQALSKPMNFSNDIAPRVIPSIHHTIQNYGKNSFMWLGPIPRVHIMDPEQLKIVFSLINDFQKPTINPFARLLADGILNHEGPKWVKHRKIINPAFHLQKLKDMVPAFYHSCNEMISKWENMVFVEESCELDVMPYLQNMTADVISRTAFGSSYEKGKKIFKLQTELAELVIQSTLGVYIPGWRFLPTKSNNKMKEISNEITTLILGIMNEREKSMKAGEAIQTDLLSILMESNLNEIKQHGNNKDIGMSIEDVIAECKLFYIAGQETTATLLVWTMVLLSSYSEWQEQARAEVFEIFGNKKPDYDGLSQLKVVTMILNEVLRLYPPVSMFGRFVKKETRLGKLTLPAGVMLALPTILIQRDPELWGEDANEFKPERFSKGVSKATKNPSAFVPFGWGPRICIGLNFAMIEAKLALSMILQRFSFELSSSYTHAPTVTITTQPQHGAHIILHKL 873
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 30297593 30316299 + ClCG11G017020.1 Cla11g01668 285490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g01668 873 PRINTS P450 superfamily signature 683 700 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g01668 873 PRINTS P450 superfamily signature 812 821 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g01668 873 PRINTS P450 superfamily signature 735 746 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g01668 873 PRINTS P450 superfamily signature 821 832 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g01668 873 PANTHER CYTOCHROME P450 FAMILY MEMBER 244 282 - -
Cla11g01668 873 Pfam Cytochrome P450 297 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g01668 873 Pfam Cytochrome P450 445 848 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g01668 873 SUPERFAMILY Cytochrome P450 180 381 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g01668 873 PANTHER CYTOCHROME P450 FAMILY MEMBER 297 387 - -
Cla11g01668 873 PANTHER CYTOCHROME P450 FAMILY MEMBER 185 242 - -
Cla11g01668 873 PANTHER CYTOCHROME P450 FAMILY MEMBER 387 870 - -
Cla11g01668 873 Gene3D - 195 241 - -
Cla11g01668 873 Gene3D - 242 286 - -
Cla11g01668 873 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 814 823 IPR017972 GO:0005506|GO:0016705
Cla11g01668 873 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 344 353 IPR017972 GO:0005506|GO:0016705
Cla11g01668 873 PRINTS E-class P450 group I signature 445 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g01668 873 PRINTS E-class P450 group I signature 692 718 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g01668 873 PRINTS E-class P450 group I signature 821 844 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g01668 873 PRINTS E-class P450 group I signature 672 689 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g01668 873 PRINTS E-class P450 group I signature 559 577 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g01668 873 PRINTS E-class P450 group I signature 811 821 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g01668 873 PANTHER CYTOCHROME 297 387 - -
Cla11g01668 873 PANTHER CYTOCHROME 185 242 - -
Cla11g01668 873 PANTHER CYTOCHROME 387 870 - -
Cla11g01668 873 PANTHER CYTOCHROME 244 282 - -
Cla11g01668 873 SUPERFAMILY Cytochrome P450 436 871 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g01668 873 Gene3D Cytochrome P450 294 395 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g01668 873 Gene3D Cytochrome P450 430 872 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g00665 Cla-Chr3:8064057 Cla11g01668 Cla-Chr11:30297593 8.55E-06 dispersed
Cla03g01462 Cla-Chr3:30146297 Cla11g01668 Cla-Chr11:30297593 8.82E-12 dispersed
Cla03g01565 Cla-Chr3:31415031 Cla11g01668 Cla-Chr11:30297593 6.72E-08 dispersed
Cla06g01075 Cla-Chr6:23355972 Cla11g01668 Cla-Chr11:30297593 7.98E-07 dispersed
Cla11g00149 Cla-Chr11:1774268 Cla11g01668 Cla-Chr11:30297593 5.80E-10 dispersed
Cla11g00257 Cla-Chr11:2992425 Cla11g01668 Cla-Chr11:30297593 1.81E-06 dispersed
Cla11g01668 Cla-Chr11:30297593 Cla11g01670 Cla-Chr11:30330034 2.28E-07 dispersed
Cla11g01668 Cla-Chr11:30297593 Cla11g01669 Cla-Chr11:30320908 2.29E-35 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g01668 - - csv:101222418 874.004