Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g01682 ATGCCTGGGAATAAGTATAACGGTAACTCAAACGATATTTCAGACCGTATACCAGGTCGAGTGGAAAGGCTCTTGCGCGAGAGAAAGCTAAGGAAAAGCTGTAAGGATTCATATTCAAACGAGGTAAACGACTACATTAAGGAGTCTGAACTAATTGAAAATGACCTTCGTTTGAAAGAAGAAGAAACCGTTGGAACTCCCTGTAAATTTTCGGAAGCTTCTGTAGCCTCGAGGGCCTTTGCCGAAGGATGTGACAAGCAAGATGGCAAGCCTCCCAGACAACGGCTGCTGGTTGTGGCCAATAGGCTGCCCGTCTCTGCAGTTAGGAGGGGTGAAGATTCCTGGTCTCTGGAGATTAGTGCTGGAGGTTTAGTGAGTGCACTTCTGGGGGTGAAGGAATTTGAGGCCAGATGGATTGGTTGGGCTGGTGTAAATGTACCAGATGAGGTGGGACAAAAGGCACTGACTGAAGCTTTGGCTGAAAAGAGGTGTATACCTGTTTTCCTTGATGAAGAGATTGTTCATCAATACTACAATGGTTACTGCAACAACATTTTATGGCCTCTGTTTCATTACCTTGGCCTTCCTCAAGAAGATCGTCTTGCCACCACCCGTAGCTTTCAGTCTCAGTTTGCCGCATACAAGAAGGCAAACCAAATGTTTGCTGATGTAGTTAACAAGCACTATGAGGAGGGTGATGTTGTTTGGTGCCATGATTATCATCTTATGTTCCTTCCAAAATGCCTCAAGGAACATAATCGTAAGATGAAAGTCGGCTGGTTTCTCCATACACCTTTTCCTTCCTCTGAAATCCACAGAACCCTTCCGTCTCGATCAGAGCTTCTGCGCTCAGTACTTGCTGCAGATCTGGTTGGCTTTCACACATATGATTATGCCCGTCATTTTGTGAGTGCTTGTACTCGTATTCTTGGACTTGAGGGTACACCAGAAGGAGTTGAGGACCAAGGAAAGCTAACACGAGTTGCTGCATTCCCTATTGGTATAGACTCGGATCGATTCATACGTGCACTCAAGATTCCTGAAGTCCAGGAACATATTGAAGAGCTAAAGGAAAGATTCAAAGGTCGAAAGGTAATGCTAGGGGTTGATCGTCTTGATATGATTAAAGGAATACCTCAAAAGATATTAGCATTTGAAAAATTCTTGGAGGAAAACCCTTATTGGCGTGATAAAGTGGTTTTGCTGCAAATTGCAGTGCCAACAAGAACAGATGTGCCAGAATACCAAAAGCTTACAAGCCAAGTTCATGAAATAGTTGGACGTATTAATGGGAGATTTGGAACATTGACTACTGTGCCGATACATCATCTGGATCGCTCCCTTGATTTTCATGCACTATGTGCACTATATGCTGTAACTGATGTAGCACTTGTCACATCTTTGAGGGATGGAATGAATCTCGTCAGTTATGAGTTCGTTGCTTGCCAGGATGCAAAGAAAGGGGTTTTAATTCTTAGCGAGGTAATTCTGCAAACCCCTAGTGCCAATATTATCGCTTTTCCCTCTATGCATGTTGTTCTGTTTGCTGGTGCTGCACAATCTCTTGGTGCTGGAGCACTTTTGGTCAACCCCTGGAACATAACAGAAGTCGCCAAATCAATCGATCGAGCATTAAATATGGGTGCTGAAGAAAGAGAAAAACGCCACAGGCATAATTTTCTCCATGTGACGACGCACACTGCCCAGGAATGGGCAGAAACTTTTGTGAGTGAACTTAATGATACAGTCGTTGAAGCTGAACTGAGGATTCGACAATGTCCGCCCCTGCTTCCATTTGACAATGCAATTAAACATTATGTGCAATCTACTAATCGATTACTTATACTGGGGTTCAATTCAACATTAACTGAACCAGTGGACACACCCGAGAGAAGAGGTGATCAGATTAGAGAAATGGATCTGAAACTACACCCGGAGTTGAAAGAACCATTGACAGCAATTTGCAACGACCCAAATACGACAGTAGTCATTCTCAGTGGGAGCGACAGAACTGTCTTGGATGATAACTTCGGGGAGTATGACATGTGGTTGGCAGCTGAGAATGGGATGTTTCTACGCTTCACAAGGGGGGACTGGATGACTACAATGCCTGAGCATTTGAATATGGAATGGGTCGACAGTGTGAAGCATGTTTTTGAGTACTTCACAGAGAGAACTCCCCGTTCCCATTTTGAGCTTCGGGAAACTTCACTTGTTTGGAACTATAAATATGCAGATGTTGAGTTTGGAAGGCTTCAAGCAAGGGATATGTTGCAGCATTTATGGACAGGTCCAATTTCTAATGCATCGGTTGATGTTGTTCAAGGTAGCCGATCTGTTGAGGTGCGAGCTGTTGGTGTTACCAAGGGATCAGCAATTGACCGAATATTGGGAGAAATAGTTCATAGCAAGTCCATGACGACTCCAATAGACTATGTCTTGTGTGTAGGCCATTTTCTTGGGAAGTTCATGATCGTACCGTACCTCTTTGCTAGCCCTCCTACTCATTCAAATTATTCATGTCATCAGGATGAAGATGTCTACACTTTCTTTGAGCCTGAACTTCCGTCGGATACTATAGGCATGGCAAGAACCAAGGGAACCGATGGACTTAAGTTAACGGGTGAGAGAAGACCTTCCATCAATGTTCCTCTAAATAGGAATGGATCAAAATCGCCTCACAATAAGGGTCGGTCGAGCTCGGAGAAGAAAACTTCAAATCATAACTGTGCAAACGGTCGTAAACCATCACCCGAGAAGATTCAATGGAATGTGCTTGATCTGAAGGCTGAGAACTACTTCTCTTGTGCTGTTGGACGATCTCGGACGAATGCTCGGTATCTGCTCGGATCATCAGATGACGTGGTGACATTCCTAAAGAAGTTGATGGTTCTTCTCGGTTCCATCTTCTCAATTTGCAGGGATGCAGCTGGAGTCGCTGGGCACATATTTGCTTTCGGGCTTTTCCTGTCACCTTTAGATACATTTCGACGTGTTATCAGAAACAAAACAACAGAACAGTTTTCGGGTTTGCCATATATATATTCTCTGTTAAACTGCCTTATTTGCCTATGGTATGGCACACCTCTCATTTCTCCCAGAAACATGATGGTCGTGACTGTCAATTCAATCGGTGCGGTTTTTCAGTTAGTGTACATCATGCTCTTCATAGCATATGCTGAGAAGGGGAAAAAGATAAAAATGCTAGGATTGTTGCTTGCAGTCTTTGGCCTTTTTATAGTTATTGTTGTTGGGAGCTTACAAATAACTGACCTCCCTTTGCGACGGAACGTCGTCGGGATTTTGAGTTGTGCATCTCTCGTTTCAATGTTCGCTTCTCCCTTGTTTATTATCAATTTGGTGATCCGAACAAAGAGTGTGGAGTTTATGCCATTTTATCTCTCCCTTTCGACCTTCCTCATGAGCATATCTTTCTTCCTTTATGGACTGTTCAATTACGACCTGTTCGTTTATGCCCCAAATGGGATAGGAGCCGTGTTGGGGATAGTTCAATTGGTGTTGTACTGCTACTACAGTCGAGTTGCCAAAGAGGAGTCTAGAGAACCTTTAATCATATCCTATGCGAACCCCAGATTTCCGAGGGTTGATAATTTGATCTTCCACAGGGTTGGTGTGCAGTTCAGCATTAGCCAACGAGCCGTTTTCGGGCTACGCCTTGTGATTTTAAAAGCTTTGTTCTATGGCTCTGCTGCTGCCTCTATGATTTTGTCTACAAGCTGTTTGGATTTGAAGGACCTTATATCAGATAAGAACCTAAAGAAAGGATAG 3789 43.71 MPGNKYNGNSNDISDRIPGRVERLLRERKLRKSCKDSYSNEVNDYIKESELIENDLRLKEEETVGTPCKFSEASVASRAFAEGCDKQDGKPPRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALTEALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKEHNRKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSDRFIRALKIPEVQEHIEELKERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTTVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDAKKGVLILSEVILQTPSANIIAFPSMHVVLFAGAAQSLGAGALLVNPWNITEVAKSIDRALNMGAEEREKRHRHNFLHVTTHTAQEWAETFVSELNDTVVEAELRIRQCPPLLPFDNAIKHYVQSTNRLLILGFNSTLTEPVDTPERRGDQIREMDLKLHPELKEPLTAICNDPNTTVVILSGSDRTVLDDNFGEYDMWLAAENGMFLRFTRGDWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSHFELRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGSAIDRILGEIVHSKSMTTPIDYVLCVGHFLGKFMIVPYLFASPPTHSNYSCHQDEDVYTFFEPELPSDTIGMARTKGTDGLKLTGERRPSINVPLNRNGSKSPHNKGRSSSEKKTSNHNCANGRKPSPEKIQWNVLDLKAENYFSCAVGRSRTNARYLLGSSDDVVTFLKKLMVLLGSIFSICRDAAGVAGHIFAFGLFLSPLDTFRRVIRNKTTEQFSGLPYIYSLLNCLICLWYGTPLISPRNMMVVTVNSIGAVFQLVYIMLFIAYAEKGKKIKMLGLLLAVFGLFIVIVVGSLQITDLPLRRNVVGILSCASLVSMFASPLFIINLVIRTKSVEFMPFYLSLSTFLMSISFFLYGLFNYDLFVYAPNGIGAVLGIVQLVLYCYYSRVAKEESREPLIISYANPRFPRVDNLIFHRVGVQFSISQRAVFGLRLVILKALFYGSAAASMILSTSCLDLKDLISDKNLKKG 1262
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 30400639 30426650 - ClCG11G017150.2 Cla11g01682 285504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g01682 1262 Gene3D Glycogen Phosphorylase B; 342 503 - -
Cla11g01682 1262 Gene3D Glycogen Phosphorylase B; 509 564 - -
Cla11g01682 1262 MobiDBLite consensus disorder prediction 881 895 - -
Cla11g01682 1262 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 94 583 - -
Cla11g01682 1262 Pfam Trehalose-phosphatase 638 820 IPR003337 GO:0003824|GO:0005992
Cla11g01682 1262 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 35 962 - -
Cla11g01682 1262 MobiDBLite consensus disorder prediction 859 917 - -
Cla11g01682 1262 Gene3D - 705 785 - -
Cla11g01682 1262 Gene3D - 638 799 IPR023214 -
Cla11g01682 1262 CDD HAD_TPP 613 817 - -
Cla11g01682 1262 Gene3D - 1096 1189 - -
Cla11g01682 1262 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 35 962 IPR001830 GO:0003824|GO:0005992
Cla11g01682 1262 SUPERFAMILY HAD-like 612 801 IPR036412 -
Cla11g01682 1262 CDD GT20_TPS 95 580 IPR001830 GO:0003824|GO:0005992
Cla11g01682 1262 Coils Coil 42 62 - -
Cla11g01682 1262 Pfam Glycosyltransferase family 20 95 496 IPR001830 GO:0003824|GO:0005992
Cla11g01682 1262 Pfam Glycosyltransferase family 20 515 580 IPR001830 GO:0003824|GO:0005992
Cla11g01682 1262 Gene3D Glycogen Phosphorylase B; 87 341 - -
Cla11g01682 1262 Gene3D - 972 1065 - -
Cla11g01682 1262 Pfam Sugar efflux transporter for intercellular exchange 1098 1180 IPR004316 GO:0016021
Cla11g01682 1262 Pfam Sugar efflux transporter for intercellular exchange 978 1062 IPR004316 GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla08g00658 Cla-Chr8:18843126 Cla11g01682 Cla-Chr11:30400639 1.18E-50 dispersed
Cla10g00141 Cla-Chr10:1490923 Cla11g01682 Cla-Chr11:30400639 1.13E-135 dispersed
Cla10g01362 Cla-Chr10:28654190 Cla11g01682 Cla-Chr11:30400639 3.20E-31 dispersed
Cla11g01682 Cla-Chr11:30400639 Cla03g00681 Cla-Chr3:8237610 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g01682 K16055 - csv:101204478 1788.08