Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g01746 ATGTCTGACGTGGCGAGTATAGCAGAGGCAGTGGCAGCAAGATTTAGTTCTTTGGAGCTTATTGGAAGAGGATCTTTTGGTGATGTCTACAAGGGGTTTGACAAGGAGCTTAACAAAGAAGTTGCTATCAAAGTTATTGATTTGGAAGAATCTGAGGATGAAATTGAGGATATTCAAAAGGAAATTTCTGTTTTGTCACAATGTCGATCACCCTACATTACTGAGTACTATGGTTCTTATCTCCACCAGACTAAATTATGGATAATAATGGAATATATGGCTGGTGGCTCTGTTGCAGATCTGCTTCAGTCTGGGCCGCCGCTTGATGAAATGTCAATTGCATGCATTTTACGGGATTTGCTGCATGCAATTGATTATTTGCACAGTGAAGGAAAAATTCACAGGGACATTAAAGCGGCAAACATTTTACTGAGTGAAAATGGTGATGTTAAGGTTGCAGATTTTGGTGTTTCTGCTCAATTAACAAGGACAATATCAAGGAGAAAGACATTTGTAGGAACTCCATTCTGGATGGCGCCAGAGGTAATTCAGAACTCTGAAGGATATAATGAGAAGGCAGACATCTGGTCTCTAGGAATCACTGCTATTGAAATGGCAAAAGGGGAGCCTCCACTTGCTGATCTTCATCCCATGAGAGTTCTTTTTATCATACCTCGAGAAAATCCACCTCAGAGACCCAGTGCAAAAGAGCTTCTGAAGCACCGATTCATTAAGAATGCCAGGAAGAGTCCCAGGCTTCAGGAGAGAATAAGAGAACGTCCGAAGTACCAAATAAAGGAAGAAGATGCAGAAACACCAACAAATGGTCCTAGAGCTATAGGTGAAACGTCAGACACTGTGAAAGTATCAAGAAATGTAAGAGATGAAACTGTTCGTGCCAGCAACCAGAGTAAAGCTCCAAAGAATGCTGGATGGGACTTTAGTATTGGGGGACCACATAGTACAGGTACTGTTCGAAGTGTAGTAAAACCACCTCAAATTAGGGAAAGAAAACCAGAAATTCCTTATGGTCAGGCTGCACCTAGTAGAGTTGCAGAGAGTGGTAACTGGCTAGCTGCGTCTGGAAATGCACCACGCGACATATCAGAGAACACTAGAGATTCATACAGTATGGGAGATGCTAGTGAAGATGAAGAGTTAAGTGGTTCAGGAACCGTTGTGATCCGGTCTCCCAGGGGATATCAAGCATCTACTCAATTTCATAATGAAAGCAGTCCGTCTGGAAGTGCACAAGCATATTTTGAGGACACATCTTTTAGTGGTACTGTTGTTATGCGTGGACAACGTGATGATTCTGATTCTCCCCAGACTCCAAAATCCAGATTGGGAATTCAAGAAAGGACTTCAAGTTTGTCTCCTGAAGACAGTGCATCAAACCTTGCGGAGGCAAAAGCTGCAATTCAAGCAGGATTGAGAAAAGCTAATGCAAGAGATAGATCAGCTATCAATAAACTCAACGACAGGAAGGAAAACAGAAGAACAGAGCAAACAGTGAGTAGCTCTGACTCTTCAAGGCATTCTCGTGAATTTTTTGATGTGCCACGAGCATTGCTAAAACCATCTCTATCAATTGATGAGGAAGAAAGTGCAAAAATAGCATCGTCTTCTGCACCATTATCGGTTTTGTTTATGTCATCCTTGAAAGAGAAGATGGAATTCAACCTTGCTGTCCTCCATTGGCCCTGTGACAGTGAGAAATTTTACAATTCCTTCCAATACATATTAGAGATGTTGGCCAACTGTGAGGCCGAAGTCTCAATTTTGAAGCAGTATTCTTTAACAGTTGAACCCCCGGGGAAAGGCCAAGAACTTCTCACAAAGGCTCCTTATGTTGATGGCTTATCCCTGCAAAATGGCCTCAAAGAAAATCTCTTCCTATGCAGCGAACTACAATGTGCTAAAAGTGCAACCTGCTCTTACACGCTGTCATCTCAGGTATTTGCAGATGATTCGGAAGGATCGCCTGCTCGTACTGTAATTAATGCACTTATCAATATGGAACACCAAAAACTTGGATCATGTGAGGTTCTTGTTACCAAGTTGCTCCAGAAATTGGCCAGTTCCAAGGAATCTTCACTGAAAGATTTACAAGACTTGGCAACTCGCTTATTCACTAAGGCAAAGACAGTTCCTGAAAATACACAAAATGTCACGGATTCTGATAGCAGCAAAAAGCAACCGAACAGGGAACTTCATTCAAATTCTAATTTGAGCTCGCTTGCTAGATTTTTACTCTCCAGATGGCAAGGTCAGGTGTCAAGGGATCTGAGTTCAGCTTAA 2301 42.07 MSDVASIAEAVAARFSSLELIGRGSFGDVYKGFDKELNKEVAIKVIDLEESEDEIEDIQKEISVLSQCRSPYITEYYGSYLHQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILRDLLHAIDYLHSEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQRPSAKELLKHRFIKNARKSPRLQERIRERPKYQIKEEDAETPTNGPRAIGETSDTVKVSRNVRDETVRASNQSKAPKNAGWDFSIGGPHSTGTVRSVVKPPQIRERKPEIPYGQAAPSRVAESGNWLAASGNAPRDISENTRDSYSMGDASEDEELSGSGTVVIRSPRGYQASTQFHNESSPSGSAQAYFEDTSFSGTVVMRGQRDDSDSPQTPKSRLGIQERTSSLSPEDSASNLAEAKAAIQAGLRKANARDRSAINKLNDRKENRRTEQTVSSSDSSRHSREFFDVPRALLKPSLSIDEEESAKIASSSAPLSVLFMSSLKEKMEFNLAVLHWPCDSEKFYNSFQYILEMLANCEAEVSILKQYSLTVEPPGKGQELLTKAPYVDGLSLQNGLKENLFLCSELQCAKSATCSYTLSSQVFADDSEGSPARTVINALINMEHQKLGSCEVLVTKLLQKLASSKESSLKDLQDLATRLFTKAKTVPENTQNVTDSDSSKKQPNRELHSNSNLSSLARFLLSRWQGQVSRDLSSA 766
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 31039965 31055936 - ClCG11G017900.2 Cla11g01746 285568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g01746 766 MobiDBLite consensus disorder prediction 432 464 - -
Cla11g01746 766 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 649 764 - -
Cla11g01746 766 MobiDBLite consensus disorder prediction 478 514 - -
Cla11g01746 766 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 231 - -
Cla11g01746 766 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Cla11g01746 766 MobiDBLite consensus disorder prediction 251 390 - -
Cla11g01746 766 MobiDBLite consensus disorder prediction 484 503 - -
Cla11g01746 766 MobiDBLite consensus disorder prediction 251 273 - -
Cla11g01746 766 CDD STKc_MST3_like 14 264 - -
Cla11g01746 766 SMART serkin_6 15 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g01746 766 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 649 764 - -
Cla11g01746 766 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 1 231 - -
Cla11g01746 766 MobiDBLite consensus disorder prediction 432 465 - -
Cla11g01746 766 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 231 557 - -
Cla11g01746 766 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 231 557 - -
Cla11g01746 766 Pfam Protein kinase domain 16 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g01746 766 Gene3D Transferase(Phosphotransferase) domain 1 12 279 - -
Cla11g01746 766 ProSiteProfiles Protein kinase domain profile. 15 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g01746 766 SUPERFAMILY Protein kinase-like (PK-like) 13 276 IPR011009 -
Cla11g01746 766 Coils Coil 41 68 - -
Cla11g01746 766 MobiDBLite consensus disorder prediction 717 740 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla11g01134 Cla-Chr11:23296140 Cla11g01746 Cla-Chr11:31039965 5.09E-71 dispersed
Cla11g01746 Cla-Chr11:31039965 Cla10g01223 Cla-Chr10:26876990 8.91E-13 dispersed
Cla11g01746 Cla-Chr11:31039965 Cla05g00892 Cla-Chr5:8826684 6.40E-55 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80965 PF00069 Pkinase 2.20E-60 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g01746 K08838 - csv:101214412 1008.44