Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cla11g01750 | ATGACTGGGAAAGAGATTCTCCACAAGATGAAGGAAAAAGTTGGGCTATGTTCCTCGGATCCAGACTCAGGAAAAGGAAAGAGCAAGATGTCCAAGCATGTCACACATGGTTTTCACTTGGTGGAAGGGAAATCAAATCATGCCATGGAAGATTATGTTGTTGCAGAGTTTAAGCAAGTTGATCATCATGAGCTTGGTTTATTTGCAATCTTCGATGGCCATTTGAGCAATTCTATTCCTGATTATCTACAATCGCATTTATTTTCTAATATAATAAATGAGCCTGATTTCTGGACCGATCCAAAGAACGCAGTCAGGAAAGCATACGAGGAAACTGATGCTTACATTTTAGAGAAAGCTGTTGATTTTAGTCATGGGGGTTCAACTGCTGTTACGGCCATATTGATAGACTGTAAGACACTAGTAGTGGGCAATGTGGGGGACTCCCGTGCAGTTATCTGTAGTAAAGGCAAGGCCAGACAATTATCAATCGATCATGAGCCGAGCTTTGAGAGAAAAAGCATTGAGGAAAGAGGTGGTTTTGTATCAAACTTTCCTGGAGATGTTCCCCGTGTTGATGGGCAGTTGGCAGTCGCAAGGGCGTTTGGTGATAGGAGCTTAAAGAAACATTTGAGTTCAGAGCCTTATGTGGTAATGGAGATGATAGATGACGAGACCGAATTTGTTATCTTGGCAAGTGATGGATTGTGGAAGGTTATGTCAAATGAAGAAGCGGTAGACTCGATCAGGCATATAAAAGACGCGCATGCAGCTGCCAAACACTTGACAGAGGAGGCCCTCAAGAGGAAGAGCAAAGATGATATCTCTTGTATAGTTGTGAGATTTCACTGA | 852 | 42.49 | MTGKEILHKMKEKVGLCSSDPDSGKGKSKMSKHVTHGFHLVEGKSNHAMEDYVVAEFKQVDHHELGLFAIFDGHLSNSIPDYLQSHLFSNIINEPDFWTDPKNAVRKAYEETDAYILEKAVDFSHGGSTAVTAILIDCKTLVVGNVGDSRAVICSKGKARQLSIDHEPSFERKSIEERGGFVSNFPGDVPRVDGQLAVARAFGDRSLKKHLSSEPYVVMEMIDDETEFVILASDGLWKVMSNEEAVDSIRHIKDAHAAAKHLTEEALKRKSKDDISCIVVRFH | 283 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 31111961 | 31114934 | + | ClCG11G017950.1 | Cla11g01750 | 285572 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cla11g01750 | 283 | CDD | PP2Cc | 43 | 282 | IPR001932 | - | |
| Cla11g01750 | 283 | ProSiteProfiles | PPM-type phosphatase domain profile. | 35 | 282 | IPR001932 | - | |
| Cla11g01750 | 283 | Pfam | Protein phosphatase 2C | 47 | 275 | IPR001932 | - | |
| Cla11g01750 | 283 | SUPERFAMILY | PP2C-like | 31 | 283 | IPR036457 | - | |
| Cla11g01750 | 283 | SMART | PP2C_4 | 31 | 280 | IPR001932 | - | |
| Cla11g01750 | 283 | PANTHER | PROTEIN PHOSPHATASE 2C 39-RELATED | 1 | 282 | - | - | |
| Cla11g01750 | 283 | PANTHER | PROTEIN PHOSPHATASE 2C | 1 | 282 | IPR015655 | GO:0004722|GO:0006470 | |
| Cla11g01750 | 283 | Gene3D | - | 30 | 283 | IPR036457 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cla01g02461 | Cla-Chr1:38303798 | Cla11g01750 | Cla-Chr11:31111961 | 5.11E-108 | dispersed | |
| Cla06g00676 | Cla-Chr6:8579939 | Cla11g01750 | Cla-Chr11:31111961 | 3.02E-36 | dispersed | |
| Cla08g00652 | Cla-Chr8:18724501 | Cla11g01750 | Cla-Chr11:31111961 | 1.01E-54 | dispersed | |
| Cla11g01380 | Cla-Chr11:27341263 | Cla11g01750 | Cla-Chr11:31111961 | 5.42E-114 | dispersed | |
| Cla11g01750 | Cla-Chr11:31111961 | Cla03g00058 | Cla-Chr3:625743 | 4.87E-40 | dispersed | |
| Cla05g01655 | Cla-Chr5:28135087 | Cla11g01750 | Cla-Chr11:31111961 | 2.03E-63 | transposed | |
| Cla10g00886 | Cla-Chr10:20318599 | Cla11g01750 | Cla-Chr11:31111961 | 1.51E-111 | transposed | |
| Cla11g01750 | Cla-Chr11:31111961 | Cla07g00237 | Cla-Chr7:2622852 | 2.59E-133 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cla11g01750 | K17506 | - | csv:101215129 | 535.798 |