Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g01796 ATGCACCGTCATACAGCCGTCAAACAGCTAGCAAAGCAGGCGTCTCCGAGCGAAGAATCGAATTATGTTTTCCTTATTATTTCTGAAATGGGCATTGATCTGGGGTTATTGGAAATGGTGAAAATGAAGTTTGTTTCCATGTCTATGGTTATGTCTGTCGTCTTGTTCATGTGTATTGGATCTTACGCCTCTTTCACTCCCATTGATAACTATTTGATATCGTGTGGTTCTACACAAAACATCACCTTCCAAGGGAGAACGTTTGTTCCTGATTCTGGACATTCATTGCTCTCCAATGATGGTGAAAGCTCTGTTGTTGTTAGTTCAAAAGGCACTACTGCTCCATCTCCAATCTATCAATCTGCTCGGGTTTTCACGAGCATTGCTTCGTATAAATTCGAAATCAAGAAAGAAGGCCGGCATTGGGTTCGATTGTATTTTTATCCTATTCCAAAGTCAGAGAAGAATCTTGCATCTGCATCAATTACTGTTGTTACTGAGAAGTTTGTGCTGTTGAACAACTTCACTTTCAAGAACTACAATGGTTCTTTTATGTTCAAGGAGTATGCAATCAATGTCACTTCAGATTCCTTGACCCTTACTTTCATTCCGTCCAATGGTTCTGTTTCATTTGTTAATGCGATTGAAGTTGTCTCGGTGCCTGATGAGCTGATACCTGACCAAGCATTGGCTTTGAATCCATCTGCTCCTTTTAGCGGTATCTCGGAACTTGCTTTTGAAACTGTTTACCGGCTGAATATGGGGGGTCCTTTACTCACTTCACAAAATGATACGCTTGGAAGGACTTGGGAGAATGATATGAAATACCTCCATGTCAACAGTTCTGCAGTGAATGTCTCTGCCAACCCCAGGAGCATAAAATATCATGCCGGTGTGACACCAGAAACTGCACCAAATTGGGTTTATGCGACTGCCGATGCCATGGGAGACCCAAATGTACCGAACGTGAACTTCAACTTGACTTGGGTTTTCTCTGTTGAGCCAAATTTTCAATACTTTGTCAGAGTGCACTTTTGTGATATAATGAGCAAGGCTCTCAATAATCTGGTTTTCAATCTTTACATCAATTCTGATAATGCTCTGGGAAGCTTTGATCTATCATTGTTAACCGGTGACTTAGGTGTGCCTTATTACAAAGACTTCATTTCCAACTCAGCAGATTCGACTACTTTGACCGTTAGTGTCGGTCCAGATACAATGGCAGACATCACCAATGCAACCATGAATGGATTGGAGATTATGAAGATAAGCAACCAAGCTGGGAGCTTGGATGGAACTTCATCTGTTGAAAGTCTTTTCCCAGATGCGCCTTCAAAGAAGAACAATATAGCAATCATTGTTGGTTGTGTCTTGGGAGCTGTAGTTGGCCTTGCTTTGCTCATCTTGTGTTATTGCTGTTACATAGGACGCAAGTCAAAGACTACTCAACCACCACACCCTTGGCTGCCTTTGCCCTTATATGGGAACTCTCAAACCATTACAAAAGTGTCAACAACTTCTCAAAAGAGTGGAACTGCAAGCTTCATTTCTTTGGCTTCCTCCAGTCTCGGCAGATTCTTCACATTTCAGGAAATTCTTGATGCTACCAACAAATTTGACGAAAATCTGCTCCTTGGAGTTGGTGGTTTTGGTAGAGTTTACAAGGGAACACTTGAAGATGGTATGAAAGTTGCTGTTAAAAGAGGTAACCCCAGATCAGAACAAGGTCTTGCCGAATTTCGAACTGAAATTGAAATGTTATCAAAGCTCCGACATCGTCACCTAGTGTCTCTTATTGGCTACTGTGATGAAAGATCAGAAATGATTCTTGTCTATGAGTACATGGCAAATGGACCTCTCAGGAGTCACTTGTATGGAACAGATCTACCACCGTTGTCGTGGAAGCAACGACTTGATATTTGCATTGGTGCTGCGAGGGGGCTTCATTATCTTCACACTGGTGCAGCTCAAAGCATTATACACCGAGATGTTAAAACCACAAACATTCTCTTGGACGAGAATTTTGTTGCCAAAGTTGCAGACTTTGGTCTCTCAAAAACTGGGCCATCTCTGGATCAGACTCATGTAAGTACGGCTGTCAAGGGTAGTTTTGGTTACCTCGATCCTGAATACTTCAGGCGACAACAGCTCACTGAGAAGTCAGATGTATATTCATTCGGGGTTGTGCTAATGGAAGTTCTCTGCACGAGGCCAGCGCTAAACCCTGTTCTGCCCCGAGAACAAGTCAATATAGCAGAATGGGCAATGACCTGGCAGAAGAAGGGCATGCTAGATCATATTATGGACCCAAATCTGGTAGGTAAAGTTAATCCAGCATCACTTAAGAAGTTTGGTGAAACAGCTGAGAAGTGTCTGGCCGAGTATGGGGTTGACAGGCCATCTATGGGAGACGTCCTGTGGAACCTGGAATATGCTCTTCAGCTCGAGGAAACTTCATCTGCTCTAATGGAACCTGAAGACAACAGCACAAATCACATCCCTACCATCCAACTGACCCCACTTGAGCCATTTGATAATAGTGTAAGCATGATTGATGGAGGGAACTCTGGCACCGACGATGATGCAGAAGATGCTGCAACAAGTGCAGTATTTTCACAGCTCGTAAATCCTCGTGGGAGATGA 2643 43.06 MHRHTAVKQLAKQASPSEESNYVFLIISEMGIDLGLLEMVKMKFVSMSMVMSVVLFMCIGSYASFTPIDNYLISCGSTQNITFQGRTFVPDSGHSLLSNDGESSVVVSSKGTTAPSPIYQSARVFTSIASYKFEIKKEGRHWVRLYFYPIPKSEKNLASASITVVTEKFVLLNNFTFKNYNGSFMFKEYAINVTSDSLTLTFIPSNGSVSFVNAIEVVSVPDELIPDQALALNPSAPFSGISELAFETVYRLNMGGPLLTSQNDTLGRTWENDMKYLHVNSSAVNVSANPRSIKYHAGVTPETAPNWVYATADAMGDPNVPNVNFNLTWVFSVEPNFQYFVRVHFCDIMSKALNNLVFNLYINSDNALGSFDLSLLTGDLGVPYYKDFISNSADSTTLTVSVGPDTMADITNATMNGLEIMKISNQAGSLDGTSSVESLFPDAPSKKNNIAIIVGCVLGAVVGLALLILCYCCYIGRKSKTTQPPHPWLPLPLYGNSQTITKVSTTSQKSGTASFISLASSSLGRFFTFQEILDATNKFDENLLLGVGGFGRVYKGTLEDGMKVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLDICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDHIMDPNLVGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLEETSSALMEPEDNSTNHIPTIQLTPLEPFDNSVSMIDGGNSGTDDDAEDAATSAVFSQLVNPRGR 880
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 31629607 31634418 + ClCG11G018380.2 Cla11g01796 285618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g01796 880 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 57 873 - -
Cla11g01796 880 Gene3D Transferase(Phosphotransferase) domain 1 615 832 - -
Cla11g01796 880 Gene3D - 70 220 - -
Cla11g01796 880 Gene3D - 244 425 - -
Cla11g01796 880 Pfam Protein tyrosine and serine/threonine kinase 544 737 IPR001245 GO:0004672|GO:0006468
Cla11g01796 880 ProSitePatterns Protein kinases ATP-binding region signature. 545 567 IPR017441 GO:0005524
Cla11g01796 880 CDD STKc_IRAK 545 810 - -
Cla11g01796 880 Gene3D Phosphorylase Kinase; domain 1 498 614 - -
Cla11g01796 880 SMART serkin_6 539 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g01796 880 ProSiteProfiles Protein kinase domain profile. 539 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g01796 880 ProSitePatterns Serine/Threonine protein kinases active-site signature. 659 671 IPR008271 GO:0004672|GO:0006468
Cla11g01796 880 SUPERFAMILY Protein kinase-like (PK-like) 516 810 IPR011009 -
Cla11g01796 880 PANTHER OS07G0166700 PROTEIN 57 873 IPR045272 GO:0004714|GO:0006468
Cla11g01796 880 Pfam Malectin-like domain 73 423 IPR024788 -
Cla11g01796 880 MobiDBLite consensus disorder prediction 844 865 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01647 Cla-Chr2:31260831 Cla11g01796 Cla-Chr11:31629607 0 dispersed
Cla07g01516 Cla-Chr7:32357526 Cla11g01796 Cla-Chr11:31629607 1.37E-178 dispersed
Cla01g02462 Cla-Chr1:38303940 Cla11g01796 Cla-Chr11:31629607 0 transposed
Cla02g00798 Cla-Chr2:10398120 Cla11g01796 Cla-Chr11:31629607 9.19E-143 transposed
Cla02g01342 Cla-Chr2:27675668 Cla11g01796 Cla-Chr11:31629607 0 transposed
Cla02g02009 Cla-Chr2:35069904 Cla11g01796 Cla-Chr11:31629607 0 transposed
Cla05g00907 Cla-Chr5:9007152 Cla11g01796 Cla-Chr11:31629607 0 transposed
Cla06g00324 Cla-Chr6:4137303 Cla11g01796 Cla-Chr11:31629607 7.60E-67 transposed
Cla06g01573 Cla-Chr6:29289936 Cla11g01796 Cla-Chr11:31629607 0 transposed
Cla09g00209 Cla-Chr9:2085156 Cla11g01796 Cla-Chr11:31629607 0 transposed
Cla11g01292 Cla-Chr11:26481206 Cla11g01796 Cla-Chr11:31629607 0 transposed
Cla01g02008 Cla-Chr1:34704902 Cla11g01796 Cla-Chr11:31629607 4.65E-74 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80966 PF12819 Malectin_like 2.60E-39 CL0202 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g01796 - - csv:101215627 1601.26