Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g01825 ATGATTTCCGGATTTCAGATCCGATTAGATCCACTCGCGCTTGAAGCTTCCTTCGATAGATCTGAAAGGACCTTGATGTTAACGTCGCCGGAGCCAAGTTTGATGCAGTTCTTGATCAAAATTTTGCGCGACGGATTGGGTTCCTCTCTAGAACTTGAAAAGGCGGTTTTCTCTTCCTCACCTAACTCTTGGGAGGAGGAGTTGATCATTGCATGTGATGTGGATGAGGCTTGCAGTGTTGCACCGAACTTGTACAGTGCTTCGTCAGAAACTGGAAAGGGGAAGGAATCGCAAACAAGAAGTGGAAACAACCGGAAATGTGGAGTTGCACGAAGCTTCCCATTTCGTGAATTGGCGACGGCTACGAGAGGTTTCAAGGAAGTGAACTTGATTGGTGAAGGGGGTTTTGGAAGAGTTTACAAAGGCCGATTAGAAACAGGCCAGGTTGTTGCGATCAAACAACTCAATCATGATGGTCTTCAGGGATATCAAGAATTCATTGTCGAAGTTCTTATGTTAAGTTTATTGCATCACTGTAATCTTGTCACGTTGATTGGTTATTGTACTGATGGAGATCAAAGACTGTTGGTCTATGAGTATATGTCGATGGGAAGCTTGGAAAACCATCTTTTTGGTTTGTTGCCTGAACGGCCACCATTGAGTTGGAACACTAGAATCAAGATTGCTCTTGGTGCAGCCCAGGGCCTTGAGTATCTTCACTGCACAGCCAATCCGCCAGTCATCTACCGTGACTTGAAATCTGCAAATATTTTACTCGATGATGACTTCAATCCAAAGCTCTCAGATTTTGGACTGGCAAAGTTAGGACCGGTTGGTGACAACACTCATGTTTCCACCAGAGTTATGGGAACGTATGGCTATTGTGCTCCGGAGTATGCCATGAGTGGCAAACTGACCCTTAAATCTGATATTTATTGCTTCGGTGTAGTTCTCTTGGAGCTAATTACAGGTAGGAAAGCTATCGACTCCACCAAGAAACCTGGAGAGCAAAATCTGGTTGCTTGGTCTCGCCCTTTTCTAAAAGACCGGAGGAAGTTCATTCAATTAGTCGACCCACTGCTGGAAGGACGCTACCCTCTTCGTTGTCTACACCATGCAATCGCAATTGCTGCAATGTGTCTCCAGGAGCAACCAACATTCCGGCCAATTATCAGTGATATCGTTGTGGCCCTTGAGTACTTAGCTTCTCAGAGTTACTTATCAGAACAACCGAGGGACGGCATGCCTAGTCCGTCCAAGCTATCTCCTCAAGGGGACAGTAGTACCCGTGTTCAAGAATCAAGATACGGAAAGAGTTCAACATCCAAGTAA 1332 45.42 MISGFQIRLDPLALEASFDRSERTLMLTSPEPSLMQFLIKILRDGLGSSLELEKAVFSSSPNSWEEELIIACDVDEACSVAPNLYSASSETGKGKESQTRSGNNRKCGVARSFPFRELATATRGFKEVNLIGEGGFGRVYKGRLETGQVVAIKQLNHDGLQGYQEFIVEVLMLSLLHHCNLVTLIGYCTDGDQRLLVYEYMSMGSLENHLFGLLPERPPLSWNTRIKIALGAAQGLEYLHCTANPPVIYRDLKSANILLDDDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYCFGVVLLELITGRKAIDSTKKPGEQNLVAWSRPFLKDRRKFIQLVDPLLEGRYPLRCLHHAIAIAAMCLQEQPTFRPIISDIVVALEYLASQSYLSEQPRDGMPSPSKLSPQGDSSTRVQESRYGKSSTSK 443
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 31921672 31926731 - ClCG11G018750.2 Cla11g01825 285647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g01825 443 ProSiteProfiles Protein kinase domain profile. 125 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g01825 443 SUPERFAMILY Protein kinase-like (PK-like) 107 399 IPR011009 -
Cla11g01825 443 PANTHER OS07G0668900 PROTEIN 88 429 - -
Cla11g01825 443 PANTHER OS07G0668900 PROTEIN 88 429 - -
Cla11g01825 443 Pfam Protein kinase domain 125 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g01825 443 Gene3D Phosphorylase Kinase; domain 1 95 200 - -
Cla11g01825 443 Gene3D Transferase(Phosphotransferase) domain 1 201 414 - -
Cla11g01825 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Cla11g01825 443 ProSitePatterns Protein kinases ATP-binding region signature. 131 153 IPR017441 GO:0005524
Cla11g01825 443 MobiDBLite consensus disorder prediction 408 443 - -
Cla11g01825 443 SMART serkin_6 125 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g01825 443 CDD STKc_IRAK 131 399 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla08g00940 Cla11g01825 CCT
Cla08g00940 Cla11g01825 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla08g00940 Cla-Chr8:21956257 Cla11g01825 Cla-Chr11:31921672 5.22E-55 dispersed
Cla10g01964 Cla-Chr10:35470374 Cla11g01825 Cla-Chr11:31921672 5.44E-158 dispersed
Cla11g01825 Cla-Chr11:31921672 Cla05g00626 Cla-Chr5:5770602 2.04E-168 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80967 PF00069 Pkinase 5.50E-45 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g01825 - - csv:101203407 677.552