Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cla11g01835 | ATGGCTACGGGTATAGATTTTTCACCTCCCTTCACTCTACTGGAAGGCGGCGGATACAATAAGGACAATGTATCAGCCACAGATGACGAAAGTTCTGATAGCTTTAATAGTTTGAAACAGATGAGCAGTGGGAAGCCTCCCCGACACCTCTCAGTAATGCGACATAGTCTGAGCTCCATAAAGCTCCTTGGCCAAGCTGATTTAAGCTTGGATGCTGAAACTCTTGGGAATAAGTCACCTGATGGAAAAGCGGGATACTTACCTGTCTTTAGATCGGGTAGCTGTTCAGAAAGGGGACCTAAACAGTACATGGAAGACGAGCACATATGCATAGATGATCTTGTTGAACATGTCCATGCTTGTGCAGATTTCACTTCTCCTGGAGCTTTCTATGGTGTATTTGATGGCCATGGGGGTACAGACGCTGCTGCTTTTGTTAGAAAGAACATCCTCAGATTCATAGTCGAGGACTCCTGTTTTCCAATTAGTGTGGAGAAGGCAATTAAGAGTGCTTTTTTGAAAGCTGATTATGCTTTTGCTGATGCTAGTTCTCTGGATATCTCCTCTGGCACAACTGCCCTGACTGCTTTCATTTTTGGAAGAACAATGATTATTGCGAATGCTGGGGATTGTCGAGCTGTTCTGGGGAGGAGGGGGAAGGCTATCGAGGTGTCGAAGGATCACAAGCCCAACTGTGCTTCTGAAAAGCTCAGAATTGAGAAACTGGGTGGGGTGATCTATGATGGGTACCTCAATGGCCAGCTCTCTGTTGCACGTGCTATAGGAGATTGGCACATGAAAGGTGCTAAGGGTTCTGCTTGCCCACTGAGTGCCGAGCCAGAGCTGCAGGAACTGAATTTGACGGAGGAAGATGAATTTCTAATAATGGGATGCGATGGGCTTTGGGATGTGATGAGCAGCCAGTATGCTGTTACAATGGCAAGGAAAGAGCTGATGCTACATAATGATCCAGAAAGGTGTTCAAGAGAGCTGGTAAGAGAGGCACTAAAGCGCAATACATGCGATAATTTAACTGTTATTGTGGTCTGTTTTTCGGCTGATCCGCCCCCTCGGATAGAAATTCCTCAAACTCGAGTAAGGAGAAGCATATCATTAGAAGGGCTGAATTTGTTGAAGGGTGTATTGGACTGCAATTCTTGA | 1161 | 45.74 | MATGIDFSPPFTLLEGGGYNKDNVSATDDESSDSFNSLKQMSSGKPPRHLSVMRHSLSSIKLLGQADLSLDAETLGNKSPDGKAGYLPVFRSGSCSERGPKQYMEDEHICIDDLVEHVHACADFTSPGAFYGVFDGHGGTDAAAFVRKNILRFIVEDSCFPISVEKAIKSAFLKADYAFADASSLDISSGTTALTAFIFGRTMIIANAGDCRAVLGRRGKAIEVSKDHKPNCASEKLRIEKLGGVIYDGYLNGQLSVARAIGDWHMKGAKGSACPLSAEPELQELNLTEEDEFLIMGCDGLWDVMSSQYAVTMARKELMLHNDPERCSRELVREALKRNTCDNLTVIVVCFSADPPPRIEIPQTRVRRSISLEGLNLLKGVLDCNS | 386 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 31986111 | 31990570 | - | ClCG11G018860.1 | Cla11g01835 | 285657 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cla11g01835 | 386 | MobiDBLite | consensus disorder prediction | 18 | 49 | - | - | |
| Cla11g01835 | 386 | Gene3D | - | 76 | 354 | IPR036457 | - | |
| Cla11g01835 | 386 | PANTHER | PROTEIN PHOSPHATASE 2C | 1 | 373 | IPR015655 | GO:0004722|GO:0006470 | |
| Cla11g01835 | 386 | SUPERFAMILY | PP2C-like | 85 | 352 | IPR036457 | - | |
| Cla11g01835 | 386 | PANTHER | PROTEIN PHOSPHATASE 2C 27-RELATED | 1 | 373 | - | - | |
| Cla11g01835 | 386 | SMART | PP2C_4 | 81 | 349 | IPR001932 | - | |
| Cla11g01835 | 386 | ProSitePatterns | PPM-type phosphatase domain signature. | 130 | 138 | IPR000222 | GO:0043169 | |
| Cla11g01835 | 386 | SMART | PP2C_SIG_2 | 106 | 351 | IPR001932 | - | |
| Cla11g01835 | 386 | CDD | PP2Cc | 90 | 351 | IPR001932 | - | |
| Cla11g01835 | 386 | MobiDBLite | consensus disorder prediction | 29 | 44 | - | - | |
| Cla11g01835 | 386 | ProSiteProfiles | PPM-type phosphatase domain profile. | 91 | 351 | IPR001932 | - | |
| Cla11g01835 | 386 | Pfam | Protein phosphatase 2C | 92 | 343 | IPR001932 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cla02g01687 | Cla-Chr2:31763415 | Cla11g01835 | Cla-Chr11:31986111 | 6.44E-108 | dispersed | |
| Cla05g01670 | Cla-Chr5:28375353 | Cla11g01835 | Cla-Chr11:31986111 | 2.02E-28 | dispersed | |
| Cla06g00403 | Cla-Chr6:4945314 | Cla11g01835 | Cla-Chr11:31986111 | 6.05E-102 | dispersed | |
| Cla06g01440 | Cla-Chr6:27976647 | Cla11g01835 | Cla-Chr11:31986111 | 4.83E-30 | dispersed | |
| Cla11g01835 | Cla-Chr11:31986111 | Cla05g01655 | Cla-Chr5:28135087 | 2.08E-43 | dispersed | |
| Cla11g01835 | Cla-Chr11:31986111 | Cla09g00444 | Cla-Chr9:4222654 | 2.89E-109 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cla11g01835 | K14803 | - | csv:101205355 | 764.222 |