Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g01835 ATGGCTACGGGTATAGATTTTTCACCTCCCTTCACTCTACTGGAAGGCGGCGGATACAATAAGGACAATGTATCAGCCACAGATGACGAAAGTTCTGATAGCTTTAATAGTTTGAAACAGATGAGCAGTGGGAAGCCTCCCCGACACCTCTCAGTAATGCGACATAGTCTGAGCTCCATAAAGCTCCTTGGCCAAGCTGATTTAAGCTTGGATGCTGAAACTCTTGGGAATAAGTCACCTGATGGAAAAGCGGGATACTTACCTGTCTTTAGATCGGGTAGCTGTTCAGAAAGGGGACCTAAACAGTACATGGAAGACGAGCACATATGCATAGATGATCTTGTTGAACATGTCCATGCTTGTGCAGATTTCACTTCTCCTGGAGCTTTCTATGGTGTATTTGATGGCCATGGGGGTACAGACGCTGCTGCTTTTGTTAGAAAGAACATCCTCAGATTCATAGTCGAGGACTCCTGTTTTCCAATTAGTGTGGAGAAGGCAATTAAGAGTGCTTTTTTGAAAGCTGATTATGCTTTTGCTGATGCTAGTTCTCTGGATATCTCCTCTGGCACAACTGCCCTGACTGCTTTCATTTTTGGAAGAACAATGATTATTGCGAATGCTGGGGATTGTCGAGCTGTTCTGGGGAGGAGGGGGAAGGCTATCGAGGTGTCGAAGGATCACAAGCCCAACTGTGCTTCTGAAAAGCTCAGAATTGAGAAACTGGGTGGGGTGATCTATGATGGGTACCTCAATGGCCAGCTCTCTGTTGCACGTGCTATAGGAGATTGGCACATGAAAGGTGCTAAGGGTTCTGCTTGCCCACTGAGTGCCGAGCCAGAGCTGCAGGAACTGAATTTGACGGAGGAAGATGAATTTCTAATAATGGGATGCGATGGGCTTTGGGATGTGATGAGCAGCCAGTATGCTGTTACAATGGCAAGGAAAGAGCTGATGCTACATAATGATCCAGAAAGGTGTTCAAGAGAGCTGGTAAGAGAGGCACTAAAGCGCAATACATGCGATAATTTAACTGTTATTGTGGTCTGTTTTTCGGCTGATCCGCCCCCTCGGATAGAAATTCCTCAAACTCGAGTAAGGAGAAGCATATCATTAGAAGGGCTGAATTTGTTGAAGGGTGTATTGGACTGCAATTCTTGA 1161 45.74 MATGIDFSPPFTLLEGGGYNKDNVSATDDESSDSFNSLKQMSSGKPPRHLSVMRHSLSSIKLLGQADLSLDAETLGNKSPDGKAGYLPVFRSGSCSERGPKQYMEDEHICIDDLVEHVHACADFTSPGAFYGVFDGHGGTDAAAFVRKNILRFIVEDSCFPISVEKAIKSAFLKADYAFADASSLDISSGTTALTAFIFGRTMIIANAGDCRAVLGRRGKAIEVSKDHKPNCASEKLRIEKLGGVIYDGYLNGQLSVARAIGDWHMKGAKGSACPLSAEPELQELNLTEEDEFLIMGCDGLWDVMSSQYAVTMARKELMLHNDPERCSRELVREALKRNTCDNLTVIVVCFSADPPPRIEIPQTRVRRSISLEGLNLLKGVLDCNS 386
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 31986111 31990570 - ClCG11G018860.1 Cla11g01835 285657
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cla11g01835 386 MobiDBLite consensus disorder prediction 18 49 - -
Cla11g01835 386 Gene3D - 76 354 IPR036457 -
Cla11g01835 386 PANTHER PROTEIN PHOSPHATASE 2C 1 373 IPR015655 GO:0004722|GO:0006470
Cla11g01835 386 SUPERFAMILY PP2C-like 85 352 IPR036457 -
Cla11g01835 386 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 373 - -
Cla11g01835 386 SMART PP2C_4 81 349 IPR001932 -
Cla11g01835 386 ProSitePatterns PPM-type phosphatase domain signature. 130 138 IPR000222 GO:0043169
Cla11g01835 386 SMART PP2C_SIG_2 106 351 IPR001932 -
Cla11g01835 386 CDD PP2Cc 90 351 IPR001932 -
Cla11g01835 386 MobiDBLite consensus disorder prediction 29 44 - -
Cla11g01835 386 ProSiteProfiles PPM-type phosphatase domain profile. 91 351 IPR001932 -
Cla11g01835 386 Pfam Protein phosphatase 2C 92 343 IPR001932 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01687 Cla-Chr2:31763415 Cla11g01835 Cla-Chr11:31986111 6.44E-108 dispersed
Cla05g01670 Cla-Chr5:28375353 Cla11g01835 Cla-Chr11:31986111 2.02E-28 dispersed
Cla06g00403 Cla-Chr6:4945314 Cla11g01835 Cla-Chr11:31986111 6.05E-102 dispersed
Cla06g01440 Cla-Chr6:27976647 Cla11g01835 Cla-Chr11:31986111 4.83E-30 dispersed
Cla11g01835 Cla-Chr11:31986111 Cla05g01655 Cla-Chr5:28135087 2.08E-43 dispersed
Cla11g01835 Cla-Chr11:31986111 Cla09g00444 Cla-Chr9:4222654 2.89E-109 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g01835 K14803 - csv:101205355 764.222