Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g01852 ATGGAGAAGGGGCCGACCACTGTTTCAGCAATGGAAGCGTTCGAGAAGCTGGAGAAGGTTGGAGAAGGAACTTACGGCAAAGTTTATAGGGCAAGGGAGAAGGCGACCGGCAAGATTGTGGCGCTCAAGAAGACGCGCCTCCATGAAGATGAGGAAGGTGTTCCTCCCACCACTCTCAGAGAGGTTTCAATTCTTCGAATGCTTTCTCGGGATCCCCATATTGTTAGGTTGATGGATGTCAAACAAGGCCAGAACAAGGAAGGGAAAACCGTCCTTTACTTGGTGTTTGAATACATGGATACTGATCTGAAGAAATTCATCAAGAGTTTCCGTCAAACGGGAGAAAACATTCCCGTTAACACTGTCAAGAGTTTGATGTACCAACTCTGTAAGGGCGTTGCCTTCTGCCATGGTCATGGAATCCTGCACAGGGACCTGAAACCACACAATCTCTTGATGGACCGAAAGACAATGATGCTCAAAATTGCAGACCTTGGGTTGGCTCGAGCATTTACTGTGCCAATTAAGAAGTATACTCATGAGATACTGACCCTCTGGTATAGAGCTCCCGAAGTTTTGTTGGGGGCAACTCATTACTCCACAGCTGTAGATATGTGGTCTGTTGCCTGCATATTCGCCGAACTTGCCACCAAGCAGGCTCTCTTTCCTGGAGACTCTGAGTTGCAACAGCTCCTTCATATCTTCAGGCTATTAGGAACCCCAAATGAAAAGATCTGGCCTGGTGTGAGCAAACTAATGAACTGGCATGAATATCCCCAGTGGAGCCCCCAAAGCCTTTCAACTGCTGTCCCCAACTTGGATGATAAAGGGCTAGATCTGCTTTCACAAATGTTGAGGTATGAACCTTCAACGCGTATTTCAGCAAAGAAAGCAATGGAACATCCTTATTTTGATGACTTGAACAAGGAATATCTCTGA 939 46.54 MEKGPTTVSAMEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHIVRLMDVKQGQNKEGKTVLYLVFEYMDTDLKKFIKSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSTAVDMWSVACIFAELATKQALFPGDSELQQLLHIFRLLGTPNEKIWPGVSKLMNWHEYPQWSPQSLSTAVPNLDDKGLDLLSQMLRYEPSTRISAKKAMEHPYFDDLNKEYL 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 32061152 32063338 + ClCG11G019050.1 Cla11g01852 285674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g01852 312 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Cla11g01852 312 ProSiteProfiles Protein kinase domain profile. 14 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g01852 312 PANTHER CELL DIVISION PROTEIN KINASE 7 309 - -
Cla11g01852 312 SMART serkin_6 14 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g01852 312 PANTHER - 7 309 - -
Cla11g01852 312 Pfam Protein kinase domain 14 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g01852 312 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Cla11g01852 312 SUPERFAMILY Protein kinase-like (PK-like) 9 308 IPR011009 -
Cla11g01852 312 Gene3D Transferase(Phosphotransferase) domain 1 102 311 - -
Cla11g01852 312 Gene3D Phosphorylase Kinase; domain 1 9 100 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g00617 Cla-Chr4:20398325 Cla11g01852 Cla-Chr11:32061152 1.03E-156 dispersed
Cla05g02205 Cla-Chr5:33751217 Cla11g01852 Cla-Chr11:32061152 1.56E-119 dispersed
Cla07g00667 Cla-Chr7:14285108 Cla11g01852 Cla-Chr11:32061152 8.89E-24 dispersed
Cla08g01612 Cla-Chr8:28736555 Cla11g01852 Cla-Chr11:32061152 1.14E-32 dispersed
Cla11g01852 Cla-Chr11:32061152 Cla02g02341 Cla-Chr2:38493991 4.83E-71 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80968 PF00069 Pkinase 7.50E-71 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g01852 K07760 - csv:101208001 624.78