Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla11g01852 | ATGGAGAAGGGGCCGACCACTGTTTCAGCAATGGAAGCGTTCGAGAAGCTGGAGAAGGTTGGAGAAGGAACTTACGGCAAAGTTTATAGGGCAAGGGAGAAGGCGACCGGCAAGATTGTGGCGCTCAAGAAGACGCGCCTCCATGAAGATGAGGAAGGTGTTCCTCCCACCACTCTCAGAGAGGTTTCAATTCTTCGAATGCTTTCTCGGGATCCCCATATTGTTAGGTTGATGGATGTCAAACAAGGCCAGAACAAGGAAGGGAAAACCGTCCTTTACTTGGTGTTTGAATACATGGATACTGATCTGAAGAAATTCATCAAGAGTTTCCGTCAAACGGGAGAAAACATTCCCGTTAACACTGTCAAGAGTTTGATGTACCAACTCTGTAAGGGCGTTGCCTTCTGCCATGGTCATGGAATCCTGCACAGGGACCTGAAACCACACAATCTCTTGATGGACCGAAAGACAATGATGCTCAAAATTGCAGACCTTGGGTTGGCTCGAGCATTTACTGTGCCAATTAAGAAGTATACTCATGAGATACTGACCCTCTGGTATAGAGCTCCCGAAGTTTTGTTGGGGGCAACTCATTACTCCACAGCTGTAGATATGTGGTCTGTTGCCTGCATATTCGCCGAACTTGCCACCAAGCAGGCTCTCTTTCCTGGAGACTCTGAGTTGCAACAGCTCCTTCATATCTTCAGGCTATTAGGAACCCCAAATGAAAAGATCTGGCCTGGTGTGAGCAAACTAATGAACTGGCATGAATATCCCCAGTGGAGCCCCCAAAGCCTTTCAACTGCTGTCCCCAACTTGGATGATAAAGGGCTAGATCTGCTTTCACAAATGTTGAGGTATGAACCTTCAACGCGTATTTCAGCAAAGAAAGCAATGGAACATCCTTATTTTGATGACTTGAACAAGGAATATCTCTGA | 939 | 46.54 | MEKGPTTVSAMEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHIVRLMDVKQGQNKEGKTVLYLVFEYMDTDLKKFIKSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSTAVDMWSVACIFAELATKQALFPGDSELQQLLHIFRLLGTPNEKIWPGVSKLMNWHEYPQWSPQSLSTAVPNLDDKGLDLLSQMLRYEPSTRISAKKAMEHPYFDDLNKEYL | 312 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 32061152 | 32063338 | + | ClCG11G019050.1 | Cla11g01852 | 285674 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla11g01852 | 312 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 141 | 153 | IPR008271 | GO:0004672|GO:0006468 | |
Cla11g01852 | 312 | ProSiteProfiles | Protein kinase domain profile. | 14 | 304 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla11g01852 | 312 | PANTHER | CELL DIVISION PROTEIN KINASE | 7 | 309 | - | - | |
Cla11g01852 | 312 | SMART | serkin_6 | 14 | 304 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla11g01852 | 312 | PANTHER | - | 7 | 309 | - | - | |
Cla11g01852 | 312 | Pfam | Protein kinase domain | 14 | 304 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla11g01852 | 312 | ProSitePatterns | Protein kinases ATP-binding region signature. | 20 | 43 | IPR017441 | GO:0005524 | |
Cla11g01852 | 312 | SUPERFAMILY | Protein kinase-like (PK-like) | 9 | 308 | IPR011009 | - | |
Cla11g01852 | 312 | Gene3D | Transferase(Phosphotransferase) domain 1 | 102 | 311 | - | - | |
Cla11g01852 | 312 | Gene3D | Phosphorylase Kinase; domain 1 | 9 | 100 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla04g00617 | Cla-Chr4:20398325 | Cla11g01852 | Cla-Chr11:32061152 | 1.03E-156 | dispersed | |
Cla05g02205 | Cla-Chr5:33751217 | Cla11g01852 | Cla-Chr11:32061152 | 1.56E-119 | dispersed | |
Cla07g00667 | Cla-Chr7:14285108 | Cla11g01852 | Cla-Chr11:32061152 | 8.89E-24 | dispersed | |
Cla08g01612 | Cla-Chr8:28736555 | Cla11g01852 | Cla-Chr11:32061152 | 1.14E-32 | dispersed | |
Cla11g01852 | Cla-Chr11:32061152 | Cla02g02341 | Cla-Chr2:38493991 | 4.83E-71 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80968 | PF00069 | Pkinase | 7.50E-71 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla11g01852 | K07760 | - | csv:101208001 | 624.78 |