Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cla11g01855 | ATGGCGACGATGGCGATGAAGGGCAAAGTTTGTGTTACAGGGGCTGGAGGGTTTATTGGTTCGTGGGTCGTCAAGCTTCTGCTATCCAGGGATTATATTGTTCACGGAACTGTCAGGGAGCCTAGCGATGCTAAGTATGATCACTTGAGAAAACTTGAGAAAGCGACCGAAAATTTGGAACTGTTTAAAGCTGATTTGCTGAACTATGAGTCTCTGCGTTCAGCGATTGCAGGATGTGATGGAGTTTTCCATGTTGCCTGTCCAGTTCCTTCAACAACTTCATCAAACCCCGAGACAGAAGTGATTGAACCTGCTGTAAAGGGCACACATAATGTGCTTGAAGCTTGTGTCGAAGCAAAAATTAAGCGAGTAGTTGTAGTATCCTCAGCCGCTGCAGTGTTTTTCAATCCCAGTTGGCCTCAAGGTCGAGTAATGGATGAAAGTTGTTGGTCCGATATGGAGCACTGCAGAGCTACTAAGAACTGGTATTTTCTGGCAAAAACAAAAGCTGAAAGTGAAGCCTTGGAGTTTGGGAGAAGATGTGGGCTCGACGTTGTGACTATGTGTCCTACTCTCGTTATCGGGCCGGTTTTGCAGGCAACAGTCAACGCCAGCAGCTTGGTCCTTCTCAAAATTCTAAAAGGTAATAAAGGATGTGAGTCGATGGAAAACAGGCTACGGATGTTAGTAGACGTACGAGATGTAGCAGAGGCGCTAGTTCTTTTATATGAGAAGGGGGAGGCAGAAGGAAGGTATATCTGTACCGCGCATACAATTGAGACAAGGGAGCTGGTGGATGCATTGAAGAGGAAGTACCCTGATTATAGCTATCCAAAGAAGTTGATTGAAGGGAAGGCGGAGTCGGTAAGTCTGAGCTCGGAGAAGCTGCAAAGATTGGGTTGGAAGTATCGGGCGTTAGAGGACACGCTTGTGGATGCTGTCCAGAGTTTCAAAGATGCCGGCATGTTGGAGTGA | 975 | 46.77 | MATMAMKGKVCVTGAGGFIGSWVVKLLLSRDYIVHGTVREPSDAKYDHLRKLEKATENLELFKADLLNYESLRSAIAGCDGVFHVACPVPSTTSSNPETEVIEPAVKGTHNVLEACVEAKIKRVVVVSSAAAVFFNPSWPQGRVMDESCWSDMEHCRATKNWYFLAKTKAESEALEFGRRCGLDVVTMCPTLVIGPVLQATVNASSLVLLKILKGNKGCESMENRLRMLVDVRDVAEALVLLYEKGEAEGRYICTAHTIETRELVDALKRKYPDYSYPKKLIEGKAESVSLSSEKLQRLGWKYRALEDTLVDAVQSFKDAGMLE | 324 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 32080129 | 32083318 | + | ClCG11G019080.2 | Cla11g01855 | 285677 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cla11g01855 | 324 | Pfam | NAD dependent epimerase/dehydratase family | 10 | 248 | IPR001509 | - | |
| Cla11g01855 | 324 | PANTHER | NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN | 5 | 323 | - | - | |
| Cla11g01855 | 324 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 3 | 318 | IPR036291 | - | |
| Cla11g01855 | 324 | CDD | FR_SDR_e | 10 | 301 | - | - | |
| Cla11g01855 | 324 | Coils | Coil | 52 | 72 | - | - | |
| Cla11g01855 | 324 | Gene3D | - | 2 | 324 | - | - | |
| Cla11g01855 | 324 | PANTHER | NAD DEPENDENT EPIMERASE/DEHYDRATASE | 5 | 323 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cla10g01237 | Cla-Chr10:27115404 | Cla11g01855 | Cla-Chr11:32080129 | 3.10E-88 | dispersed | |
| Cla10g01238 | Cla-Chr10:27128055 | Cla11g01855 | Cla-Chr11:32080129 | 4.19E-84 | dispersed | |
| Cla11g01855 | Cla-Chr11:32080129 | Cla02g02233 | Cla-Chr2:37473053 | 5.32E-76 | dispersed | |
| Cla11g01855 | Cla-Chr11:32080129 | Cla09g00296 | Cla-Chr9:2853720 | 7.87E-85 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cla11g01855 | - | - | bhj:120087265 | 583.948 |