Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu01g0074 | ATGAAGTGGATTCTTTTCATAATCGTTTCTCTCTTCATTTCCTTTCTTGTGAAGTTATTTCTTTCCCCTTCTAAGAATAAAGGCCCTTACAAGCTCCCACCAGGTCCATCCACATTCCCTATTCTCACTAACTTCCTATGGCTCCGCCAGTCCCCTCTTGAGCTTGAATCTTTGTTGCGTAGTTTCATTGCCAAATACGGGCCAATCCTCACTGTCCACGTCGGCCCGTCCCCGGCCATCATCATCGCTGACCGCTCCATCGCCCATAAGGCCCTCGTCCAAAACGGCGCCATTTTCGCCGACCGCCCTCAAGCTCTCTCCGTCAATAGGATCACGGCTTCTGCCAACCTCGACAATATCACCTCTGCTCCGTACGGCCCCACTTGGCGCCTTCTCCGCCGCAACCTTGCAGCGGAGATGCTCCACCCTTCACGGGTCAGGGCTTATTCCCGGGCTCGCAAGTGGGTTCTTGACATCCTCATCGCTCGCCTTTCGGCTGGGTCGGGATCCGAGGGTGGCGGGTCAGTTGTTGTTGAGCATCTTCAGTTTGCTATGTTTTGTTTGTTGGTTTTGATGTGTTTTGGGGACAAGTTGAATGAGACACAAATCTTGGAAATTCAACAAGTGCAGCGTGAGATGCTTGTAAATCTTCAACGCTTTGTTATACTTAATTTGTGGCCTAAGTTGATGAAGATTTTGCTTAGAAAGCGCTGGAAGGAATATTTACAACTCAAGAGCAAACAACAAAAGGTCCTAATCCCATTTATCGAGGCACGTGAGAAGGTCAAAGAGGAAAGGGAAAAAACGAAAGGAGAAGAAAAGGAAGAAATTGTGGTATCGTATGTTGATACGCTCCTCGATTTGCAACTCATCGATGAGAAAAGAAAGCTTAAAAACGAAGAAATGGTGAATTTATGTTCGGAGTTTCTCAACGCTGGGACCGACACCACAGCCACGACATTGCAATGGATCATGGCAAACTTGGTGAAGTACCCACAAATTCAACAAAAACTATTCGAAGAGATCAAAGGAGTTAAGGGATCACGGGAGGAGGAGGTGAAGGAAGAAGATTTAGGGAAGCTTCCATATTTGAAAGCTGTGATTCTAGAAGGATTAAGAAGACACCCACCAGGTCATTTCATGTTACCACATGCAGTGAAAGAAGATACAACGTTGGAGAATTATTTCATACCCAAGAACGGAATTGTGAATATCTACGCTGTGGAGATGGGGTGGGATCCACAGGTATGGGAGGATCCAATGGCGTTTAAGCCGGAGCGGTTCATGAATGACGACGGAGGAGAGGTGGCGTCGACGAAGTTCGATATAACGGGGAGCAAGGAGATTAAGATGATGCCATTTGGAGTAGGGAGGAGGATTTGTCCAGGGGCTACTTTGGCAATGCTTCATTTGGAATATTTTGTGGCAAATTTGGTTTGGAAATTTGAGTGGAAGGCTGTGGAAGGAGAAGAAGTTGATTTATCAGAGAAGATGGAATTCACCATTGTAATGAAGAAGCCTCTCAAAGCTCAGATTCATCCAAGGTTTTAG | 1551 | 46.36 | MKWILFIIVSLFISFLVKLFLSPSKNKGPYKLPPGPSTFPILTNFLWLRQSPLELESLLRSFIAKYGPILTVHVGPSPAIIIADRSIAHKALVQNGAIFADRPQALSVNRITASANLDNITSAPYGPTWRLLRRNLAAEMLHPSRVRAYSRARKWVLDILIARLSAGSGSEGGGSVVVEHLQFAMFCLLVLMCFGDKLNETQILEIQQVQREMLVNLQRFVILNLWPKLMKILLRKRWKEYLQLKSKQQKVLIPFIEAREKVKEEREKTKGEEKEEIVVSYVDTLLDLQLIDEKRKLKNEEMVNLCSEFLNAGTDTTATTLQWIMANLVKYPQIQQKLFEEIKGVKGSREEEVKEEDLGKLPYLKAVILEGLRRHPPGHFMLPHAVKEDTTLENYFIPKNGIVNIYAVEMGWDPQVWEDPMAFKPERFMNDDGGEVASTKFDITGSKEIKMMPFGVGRRICPGATLAMLHLEYFVANLVWKFEWKAVEGEEVDLSEKMEFTIVMKKPLKAQIHPRF | 516 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 644980 | 646919 | + | ClG42_01g0007400.10 | Clacu01g0074 | 239458 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu01g0074 | 516 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 454 | 463 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Clacu01g0074 | 516 | PRINTS | P450 superfamily signature | 461 | 472 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0074 | 516 | PRINTS | P450 superfamily signature | 312 | 329 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0074 | 516 | PRINTS | P450 superfamily signature | 452 | 461 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0074 | 516 | PRINTS | P450 superfamily signature | 366 | 377 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0074 | 516 | SUPERFAMILY | Cytochrome P450 | 33 | 515 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0074 | 516 | CDD | CYP77_89 | 65 | 509 | - | - | |
| Clacu01g0074 | 516 | FunFam | Cytochrome P450 family protein | 26 | 516 | - | - | |
| Clacu01g0074 | 516 | Gene3D | Cytochrome P450 | 26 | 516 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0074 | 516 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 13 | 514 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Clacu01g0074 | 516 | PRINTS | E-class P450 group I signature | 301 | 318 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0074 | 516 | PRINTS | E-class P450 group I signature | 406 | 430 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0074 | 516 | PRINTS | E-class P450 group I signature | 461 | 484 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0074 | 516 | PRINTS | E-class P450 group I signature | 365 | 383 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0074 | 516 | PRINTS | E-class P450 group I signature | 451 | 461 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0074 | 516 | PRINTS | E-class P450 group I signature | 87 | 108 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0074 | 516 | PRINTS | E-class P450 group I signature | 321 | 347 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0074 | 516 | PRINTS | E-class P450 group I signature | 63 | 82 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0074 | 516 | Pfam | Cytochrome P450 | 33 | 511 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu01g0074 | Clacu-Chr1:644980 | Clacu09g1741 | Clacu-Chr9:31349377 | 2.10E-191 | dispersed | |
| Clacu01g0074 | Clacu-Chr1:644980 | Clacu08g0962 | Clacu-Chr8:19707419 | 1.60E-90 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu01g0074 | K24184 | - | csv:101218555 | 832.017 |