Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu01g0097 ATGAAGGCAGGGCAAGATTTGGGCCCATTTCTTAGGCGTTGGGTCGGCCCACGTCCTTCACTCTTCTTCCGGTTCGCGGTCAAAGCCTTCCCAAAACCCTCCAATAGATGTCATACCCAAATTCCTCAGTGGCTGATTAATTTACCAGTCATGGCGACTACACTTATCTCTGGCCTTTCTTCAAACCTAAAGCTTCCTTTTCTCTCTGCAATTTCATCTTCCCACTTCCGACCCGGAACCCAGAACGCTCCATTTTCTAACTCCCCCTTCAAAGTTCAGACCCTCTGGCTCAATCCCACAAGAAATTCCAATGTGTTATCCCATAATCGAACTGGGTTTCTGATTTCGAGGAAATTGGAATCTTTCACCGTCTTTGCTGGAGATTCTGAAGCTCAAAGTGATGGTAGAGGGGAGAGTACTATGCCTGAACGGTTCAGGTACTTGACTAAAGAAGCTCCTGATCCTCCTGTGAGATGGCCTTTCTTTGTGGCTCTGGCATTTATTCTCTATGCCTGGAGAGCAGTCTTGTTTGAACTTGCTAACTGGAGAAAGGCTGTCCTTAGCATCTTTGGTTTTGTGGGATACATATTGAAAGGTGCTTTGGCCCTCATCCTCTATGTTATTGGAGATCCTATCACTTCTATGATAAGAGGCATTGAGACTGCATTCTACACGATTCGATCTTTCTACTCGGGCATAGTTGCATATGCGCCCATTCCCGAACTGACCACGATAATCATACTAGCCTCAACCGTGCTTGCAATTTCAGAAGCCAGTGCCCCTGATTCCGTTAGTAGTCAACCGTATCTTCTAACGATATCAGGTCTTGCTGGCTATGCAGCGGTGCGAGGTTACATTTCCGAGCCTTTCTTCTGGACGATTCTGTTGTGTGTGTATGGTTTTTCCAGGTTCGTCAAAAAGAGAAATGATGTAACTTCAACATTGCCTGTTGCTGCTGTGTTTGCTGCCATTGGAGAGCCATGGGTAAGAATCTTGGCTATGGGTTCATTTCTGGCTTTGGCCATTTATCACCATTGGAAGAAGGTTTCACAAGGACAGAAAGAAGATGAAGTTGAAGATGAAAAAGCTGTGTATCAGAGGGATGTTCCACTGCCTCTTCTGGGTGTAGCTTTGGCTATTGGAATTCGTGCTGCTGCCAAATGGGCTGGATATAGGCACTTAACATGGATGATTACATATATTGTATACATGGGAAGTCATCCAAAAGACCAAGTTTCCACTCCATCTCATCATATGAGAATGCTACAAGAAACCATTGGCAGTACTTTCGCTCCACACTCTTTGCTCTATAGCTATAAGAGAAGTTTCAATGGCTTCGTCGTGAAGTTAACCGAAGTCGAAGTCCAAAAAGTTTCAGAAATGAAGGGTGTAATCTCAGTTTTTCCAAATCGAAAAGCACAACTCCACACAACAAGATCGTGGGATTTCATGGGATTATCTGAACAAGTTAGTCGAGTTCCATCTGTGGAAAGTGATATCATTGTGGGAGTAATCGACACCGGGATTTGGCCGGAATCCCCTAGTTTCCTTGACCGTGGATATGGCCCGCCGCCGCCAAAGTGGAAGGGTTCTTGTGAAGTCTCACCCCATTTCTCTTGTAACAATAAAATCATTGGAGCTCGATCATATCGTAGCAATGGTCAGTATCCAATAAACGATATCAAAGGTCCAAGGGATTCAGATGGTCATGGGACACACACCGCATCTACGGTGGCAGGCGGGTTAGTTGGGGAAGCGAGTATGCTCGGTCTTGGCTTCGGCACGGCAAGAGGAGGAGTCCCATCTGCACGTATCGCCTCCTACAAAGTATGTTGGTCTGATGATTGCTTTGATGCTGATATACTTGCGGCATTTGATGATGCTATTGCCGATGGGGTTGACATCATATCTTTGTCTGTTGGACCAACTAGTACGAGAGAATACTTTGATAACCCCTTTGGTATCGGAGCTTTCCATGCAATGAAAAAGGGAATCCTAACATCAATGTCTGCTGGCAACGAGGGTCCAAGACCTTTCACTATTAGAAACTTCTCACCTTGGTCTCTATCAGTGGCAGCCAGTACTACTGATAGGAAATTTGTTACTGGTGTTCAACTTGGAGATGGAAGAAAATTCAATGGTGTAACAATCAATACATTTGATTTAAATAGAACACAATATCCATTGGTGTATGCTGGAAATATACCAAATGTCGCCGGTGGCTTTAATGGATCCATTTCCAGATTTTGCTTGGAAAACACGGTGGACAGGGAATTGGTGAAGGGTAAAATTGCCCTTTGTGATGTTTTTGTACCACCAACAATTTTGGGTTCTGTAAAAGCTGCAGTTGGAATTGTAATGCAAGATAGATCTCCAAAAGATCGCACATCCTCTTTTCCCTTGCCTGCCTCCCATCTTGACACACAACAAGGACTTCTCATTTCTTCTTATCTCAATTTAACTAGCCTTCCAACAGCTACCATCTTAAAAAGCACTGAAGGCAAGTATGAAGCCGCTCCTTTTGTTGCATCTTTCTCTTCAAGAGGTCCAAATCCATTAACCCCTAACATTCTCAAGCCAGATTTGAGTGGTCCAGGAGTTGAAATTCTTGCAGCATGGAGTCCTATGGGTTCTCCTTCAGGAGCTATTGATGACAATAGGAAACTTTTGTTTAACATAATTTCAGGAACTTCAATGGCTTGCCCACATGCTACAGCAGTTGCTGCATATGTTAAATCATTTCACCCTTCTTGGTCTCCTGCTGCACTCAAATCGGCACTTATGACAACAGCATTTCCTATAAGAGCTGAGCTTAACCCAGATGCAGAATTTGCATATGGCTCTGGCCATATAAATCCACTAGGGGCAGTAAATCCTGGATTAATCTACAATGCTTCTGAAATTGACTATATAAGATTTCTATGTGGTGAAGGTTATAACACCACTTTGCTCCAACAAATCTCTGAAGATAATTCTACATGTTCTCCCACCAATTCTGACCAAGTTTTTGACCTAAACTACCCTTCATTTGCTCTTTCCACATCAATCTCAACCTCATTCACTCAAATTTACAAAAGAAGGGTCACAAATGTTGGGTCAACAAATTCTACTTATAAAGCCACAATTTTTGCTCCTTTAGGGCTTAATATTACGGTCAATCCTTCTATTCTTTCCTTCAAAGCCTTGGGAGAAGAGCTAAAATTTGAGCTTAAAATTGACGGAAAAATCAGTAGTAGCATTGCATCCGCTTCCTTGGTTTGGGATGATGGTGTACACAAAGTGAGGAGTCCTATAATCGTCTTTGATGCTATTATGTTGATTAATCAATAA 3330 43.09 MKAGQDLGPFLRRWVGPRPSLFFRFAVKAFPKPSNRCHTQIPQWLINLPVMATTLISGLSSNLKLPFLSAISSSHFRPGTQNAPFSNSPFKVQTLWLNPTRNSNVLSHNRTGFLISRKLESFTVFAGDSEAQSDGRGESTMPERFRYLTKEAPDPPVRWPFFVALAFILYAWRAVLFELANWRKAVLSIFGFVGYILKGALALILYVIGDPITSMIRGIETAFYTIRSFYSGIVAYAPIPELTTIIILASTVLAISEASAPDSVSSQPYLLTISGLAGYAAVRGYISEPFFWTILLCVYGFSRFVKKRNDVTSTLPVAAVFAAIGEPWVRILAMGSFLALAIYHHWKKVSQGQKEDEVEDEKAVYQRDVPLPLLGVALAIGIRAAAKWAGYRHLTWMITYIVYMGSHPKDQVSTPSHHMRMLQETIGSTFAPHSLLYSYKRSFNGFVVKLTEVEVQKVSEMKGVISVFPNRKAQLHTTRSWDFMGLSEQVSRVPSVESDIIVGVIDTGIWPESPSFLDRGYGPPPPKWKGSCEVSPHFSCNNKIIGARSYRSNGQYPINDIKGPRDSDGHGTHTASTVAGGLVGEASMLGLGFGTARGGVPSARIASYKVCWSDDCFDADILAAFDDAIADGVDIISLSVGPTSTREYFDNPFGIGAFHAMKKGILTSMSAGNEGPRPFTIRNFSPWSLSVAASTTDRKFVTGVQLGDGRKFNGVTINTFDLNRTQYPLVYAGNIPNVAGGFNGSISRFCLENTVDRELVKGKIALCDVFVPPTILGSVKAAVGIVMQDRSPKDRTSSFPLPASHLDTQQGLLISSYLNLTSLPTATILKSTEGKYEAAPFVASFSSRGPNPLTPNILKPDLSGPGVEILAAWSPMGSPSGAIDDNRKLLFNIISGTSMACPHATAVAAYVKSFHPSWSPAALKSALMTTAFPIRAELNPDAEFAYGSGHINPLGAVNPGLIYNASEIDYIRFLCGEGYNTTLLQQISEDNSTCSPTNSDQVFDLNYPSFALSTSISTSFTQIYKRRVTNVGSTNSTYKATIFAPLGLNITVNPSILSFKALGEELKFELKIDGKISSSIASASLVWDDGVHKVRSPIIVFDAIMLINQ 1109
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 906500 917127 + ClG42_01g0009700.10 Clacu01g0097 239481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu01g0097 1109 CDD PA_subtilisin_like 704 828 - -
Clacu01g0097 1109 Gene3D - 974 1102 - -
Clacu01g0097 1109 Pfam Subtilase family 498 947 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Clacu01g0097 1109 CDD Peptidases_S8_3 474 931 IPR034197 -
Clacu01g0097 1109 PRINTS Subtilisin serine protease family (S8) signature 566 579 IPR015500 -
Clacu01g0097 1109 PRINTS Subtilisin serine protease family (S8) signature 895 911 IPR015500 -
Clacu01g0097 1109 PRINTS Subtilisin serine protease family (S8) signature 497 516 IPR015500 -
Clacu01g0097 1109 FunFam Subtilisin-like protease SBT5.3 392 476 - -
Clacu01g0097 1109 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 399 1098 IPR045051 -
Clacu01g0097 1109 Pfam Peptidase inhibitor I9 399 476 IPR010259 -
Clacu01g0097 1109 Gene3D - 697 835 - -
Clacu01g0097 1109 FunFam Subtilisin-like protease SBT1.5 499 714 - -
Clacu01g0097 1109 Gene3D Peptidase S8/S53 domain 499 970 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu01g0097 1109 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 392 476 IPR037045 -
Clacu01g0097 1109 SUPERFAMILY Subtilisin-like 475 961 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu01g0097 1109 ProSiteProfiles Serine proteases, subtilase domain profile. 480 957 - -
Clacu01g0097 1109 ProSitePatterns Serine proteases, subtilase family, serine active site. 896 906 IPR023828 -
Clacu01g0097 1109 Pfam Fibronectin type-III domain 1004 1100 IPR041469 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu01g0097 Clacu-Chr1:906500 Clacu05g2376 Clacu-Chr5:32108200 1.80E-301 dispersed
Clacu01g0097 Clacu-Chr1:906500 Clacu04g1044 Clacu-Chr4:24698111 2.30E-166 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu01g0097 - - - 0.0