Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu01g0377 ATGGAACAACCAACCTCCAATTCTCCTCTACTTCTCATAAATTCCCTCAATTCCTCAGTTGACCAATCTCCTTTCCTCTTCACCTTCGTCGCCGCTCTTCTAATAATTTTCCTCTATGTAAAACTCACGCGCCAGCGCGTGCCTCTTCCACCTGGTCCCTGGGGCGTTCCACTACTCGGAAACCTCCCATTTCTTGACCCCGATCTTCACACGTACTTTGCCGAATTAGGCCGAAAATATGGCCCAATAGTAAAGCTCCAACTCGGCAATAGAATTGGTATAATCGTAAATTCACCTTCGGTAGCACGTGAAGTGTTGAAAGACCACGATGTTACATTTGCAAATCGCGATGTTCCTCAAGCCGGGAGAGCTGCCTCGTACGGCGGTTCTGACATAGTTTGGACACCGTACGGACCCGAGTGGCGAATGTTGAGAAAAGTTTGTGTGTTAAAGATGCTGAGCAACGCCACTTTGGATAGCGTTTACGAGCTCCGCCGTAGAGAGGTGAGAAACACGGTGGCTCACTTGTACCGGCGATGTGGGTCAGCAGTGAACGTGGGAGAGCAGGGGTTTTTGACGGTTTTCAACGTGGTTACAAGCATGTTGTGGGGTGGTTCAGTGGAAGGAGAGCAGAGGGATGGTCTTGCAGCGGAGTTTAGAGAGACAATTTCGGAAATAACAGAGCTATTGGGAAAGCCTAATATTTCGGACTTTTTTCCAAGCTTGGCCCGTTTTGATCTCCAAGGGATTGAGAAGAAGATGCGTGAGATTGCTCCGAGATTTGATAACATTTTCGAAAAGATGATAGATGAACGATTGAAAATTGGTGGTGGAGATGACGACGGGAGTGTCAAGAAAAATGATTTCTTGCAGTTCTTACTTGAAGTTAAAGATGAAGGAGAATCCAAGACTCCTCTCACCATCACCCACCTTAAAGCCTTGCTCATGGATATGGTGGTCGGAGGGACAGACACATCGTCAAATACCATAGAATTTGCGTTGGCAGAAATGATAAAGAACCCAAAAACGCTAAAGAAAGCACAAGAAGAACTCACCGCTGTGGTCGGAGAAGACAACATCGTCGAAGAGTCCCACATTCACAGTTTCCCATATCTGAAGGCCGTAATGAAAGAAACTTTACGTTTACACCCAATTCTACCTCTGCTCGTGCCGCACTGTCCAAGCGAGACCACCATCGTCTCCAATTACGCAATTCCAAAGGGCTCTCGAGTGTTCATCAATGCTTGGGCCATTCAGCGAGACCCCAATCATTGGGAAAATCCATTGGTGTTTGATCCAGAGAGGTTTCTCAAGACCGAGAAGTGGGATTTTGGTGGGAGTGATTTTCGTTACTTCCCATTCGGGTCAGGCAGAAGAAACTGTGCAGGGATAGCCATGGCGGAAAGAATGGTAATGTATTTACTTGCTACGCTTTTGCATTCTTTTGACTGGAAATTGGAAGATGGTAAGAAGATGGAAGTTGAGGAGAAATTTGGGATTGTTTTGAAGATGAAGTCGCCTCTTGTTCTCATTCCAACGCCAAGGCTATCTAATCCAACTTTGTATCAATAA 1572 46.18 MEQPTSNSPLLLINSLNSSVDQSPFLFTFVAALLIIFLYVKLTRQRVPLPPGPWGVPLLGNLPFLDPDLHTYFAELGRKYGPIVKLQLGNRIGIIVNSPSVAREVLKDHDVTFANRDVPQAGRAASYGGSDIVWTPYGPEWRMLRKVCVLKMLSNATLDSVYELRRREVRNTVAHLYRRCGSAVNVGEQGFLTVFNVVTSMLWGGSVEGEQRDGLAAEFRETISEITELLGKPNISDFFPSLARFDLQGIEKKMREIAPRFDNIFEKMIDERLKIGGGDDDGSVKKNDFLQFLLEVKDEGESKTPLTITHLKALLMDMVVGGTDTSSNTIEFALAEMIKNPKTLKKAQEELTAVVGEDNIVEESHIHSFPYLKAVMKETLRLHPILPLLVPHCPSETTIVSNYAIPKGSRVFINAWAIQRDPNHWENPLVFDPERFLKTEKWDFGGSDFRYFPFGSGRRNCAGIAMAERMVMYLLATLLHSFDWKLEDGKKMEVEEKFGIVLKMKSPLVLIPTPRLSNPTLYQ 523
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 3795669 3798708 - ClG42_01g0037700.10 Clacu01g0377 239761
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Clacu01g0377 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Clacu01g0377 523 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g0377 523 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g0377 523 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g0377 523 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g0377 523 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g0377 523 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g0377 523 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g0377 523 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g0377 523 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g0377 523 Gene3D Cytochrome P450 38 510 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g0377 523 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g0377 523 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g0377 523 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g0377 523 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g0377 523 SUPERFAMILY Cytochrome P450 50 515 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g0377 523 Pfam Cytochrome P450 50 507 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g0377 523 CDD CYP76-like 78 512 - -
Clacu01g0377 523 FunFam Cytochrome P450 - like protein 39 509 - -
Clacu01g0377 523 PANTHER OS08G0547900 PROTEIN 25 523 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu01g0377 Clacu-Chr1:3795669 Clacu01g0379 Clacu-Chr1:3803705 3.20E-232 dispersed
Clacu01g0374 Clacu-Chr1:3784881 Clacu01g0377 Clacu-Chr1:3795669 4.00E-11 proximal
Clacu01g0375 Clacu-Chr1:3786627 Clacu01g0377 Clacu-Chr1:3795669 1.00E-45 proximal
Clacu01g0376 Clacu-Chr1:3793675 Clacu01g0377 Clacu-Chr1:3795669 3.60E-43 tandem
Clacu01g0377 Clacu-Chr1:3795669 Clacu01g0378 Clacu-Chr1:3801810 4.40E-88 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu01g0377 - - - 0.0