Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu01g0379 | ATGGAACCCACTTCCAATTTCCTTCACAGTCTCATTCATTCTCTCAATTTCATAGATCCCAATAACCAAACCCGCTTTCTTCTCACCCTTTTCACCGCTTTTCTACTTCTTCTTTATGTTAAATATTGGCCGCGGCGCTTCCGGCTGCCTCCGGGTCCCCCCGGCGTTCCTCTGCTCGGAAATCTGCCGTTTCTAGACCCAGAACTTCACACTTACTTCACGGAATTGGGCAAAAAATACGGCCCAATTGTCAAGCTCCAACTGGGTGGAAAGATTGGTATAATCGTCAACTCACCCTCCGTGGCACGTGAGATATTGAAGGATCACGATGTCATCTTTGCCAATCGTGATGTTCCTCAGGCAGGCCGAATCGCCACGTATGGCGGTTTTGACATAAGTTGGACCCCATACGGACCTGAATGGCGGATGTTGAGAAAAATTTGTACAATCAAGATGCTTAGCAATGCAGGTTTGGATTCTGTTTATGAGCTCCGCCATAGAGAGGTTAAAAATACCGTGGCTTACTTGTACCGGCGAGCTGGGTCGGCGGTGAACGTGGGAGAGCAGGTGTTTTTGACAGTTTTCAACGTGGTTACGAGCATGTTGTGGGGTGGGTCAGTGGATGGGGACAAAATTAGGGATGGCCTCGCGGCTGAGTTTAGACAAACGATTTCGGACATAACAGGGCTTTTGGGTAAGCCTAATGTTTCGGACTTTTTTCCGAGCTTGGCCCGTTTCGATTTCCAAGGAATTGAAAAACAAATGCTTAAGCTTGTTCTGAAATTGGACACTATTTTTGAAAAGATGATTGATGAACGATTGAAAATGACCGACGTTGATGAGGGTGCGAAGAAAAATGATTTCTTACAGTTCTTACTTAAAGTCAAAGATGAAGGCGATTCCAAAACTCCACTTACCATGGTTCAACTTAAAGGCTTGCTCATGGATATGGTGATTGGAGGAACAGACACATCCTCGAACACCATTGAATTCGCGATGGCAGAGATGATGAAGAACCCAAAAGTTCTAGAGAAAGCCAAGGAAGAACTAGCGATCGTGGTTGGGGAACAGAACATCGTAGAAGAGTCCCACATACAGAGTTTGCCATATCTGAAAGCGATAATGAAAGAAACCTTGCGTCTGCATCCAATTTTGCCGCTGCTAGTGCCGCACTCCCCTAGCCAGACCACCGTCATCTCCAAATACACAATCCCAAAGGGCTCTCGAGTTTTCTTCAACGTCTGGGCCATTCACCGAGACCCCAATAATTGGGAGAATCCATTGGAGTTCGTCCCAGAGAGGTTTTTCAATGATCAATTCGATTTCAGTGGGAGTGATTTTCGTTACCTTCCATTTGGGTCTGGCAGAAGAAATTGTGCAGGGATAGCCATGGCGGAAAGAATGGTAATGTATTTGCTTGCTACGCTTTTGCATTCCTTCGATTGGAAATTGAACGAAGTTGAGAAGATTGAAATCGAGGAGAAATTTGGGATTGTTTTAAAGATGAAGAAGCCTCTTGTTCTCATTCCAAAGCCTAGACTATCAGACCCCACTCTGTATCAGCAAAGCCTTTGTTTGATTCCTAAAATTCTCTTTCTTTCTCCATTTCACCATGGAACCCACTTCCAGATTCCTTCTAACTCTTACCCGCTTTCTTCTCACCTTCTTCGTCGGGTTTCTACCAATTTTTCTTTATGTCAAACGTTGGCGGCGGCGCTTGCTCGTGGCGTTCCGGTGCTGGGGAATCTGCCGTTTCTAGACCCAGAACTTCACACTTACTTCACGGAATTGGGCCGAAAGTACGGTCCAATTGTAAAGCTCCAATTGGGTGGAAAGATTGGTATAATCTTAAATTCACCAACGGTAGCGCGTGAGGTATTGAAGGACCACGATATCACATTCGCCAATCGTGACGTTCCTCAAGCAGGCCGAGTCGCCACGTACGGCGGTTTTGACATAACTTGGACCCCATATGGACCCGAGTGGCGGATGTTGAGAAAAGTTTGTACAATCAAGATGCTTAGCAATGCCAGTTTGGATTCTGTTTATGAGCTCCGTCGTAGAGAGGTGAGAAACACCGTGGGTCACTTGTACCGACGGGCGGGGGCGGCGGTCAACGTGGGAGAGCAAGGTTTTTTGACGGTTTTCAACGTGATTACGAGCATGTTGTGGGGTGGGACAGTGGAGGGGGATCAAAAGGACGCCTTTGCGGCTGAGTTTAGGGGGCTGGTTTCGGACATGACTGAGTTAGCGGGTAAGCCTAATATTTCTGACTTTTTTCCAAGTTTTGCACGCTTTGATCTCCAAGGAATCGAGAAGCAAGTGCTTAAGCTTGTCCCGAAATTGGACACGATTGAGAATGATGGATGA | 2370 | 46.54 | MEPTSNFLHSLIHSLNFIDPNNQTRFLLTLFTAFLLLLYVKYWPRRFRLPPGPPGVPLLGNLPFLDPELHTYFTELGKKYGPIVKLQLGGKIGIIVNSPSVAREILKDHDVIFANRDVPQAGRIATYGGFDISWTPYGPEWRMLRKICTIKMLSNAGLDSVYELRHREVKNTVAYLYRRAGSAVNVGEQVFLTVFNVVTSMLWGGSVDGDKIRDGLAAEFRQTISDITGLLGKPNVSDFFPSLARFDFQGIEKQMLKLVLKLDTIFEKMIDERLKMTDVDEGAKKNDFLQFLLKVKDEGDSKTPLTMVQLKGLLMDMVIGGTDTSSNTIEFAMAEMMKNPKVLEKAKEELAIVVGEQNIVEESHIQSLPYLKAIMKETLRLHPILPLLVPHSPSQTTVISKYTIPKGSRVFFNVWAIHRDPNNWENPLEFVPERFFNDQFDFSGSDFRYLPFGSGRRNCAGIAMAERMVMYLLATLLHSFDWKLNEVEKIEIEEKFGIVLKMKKPLVLIPKPRLSDPTLYQQSLCLIPKILFLSPFHHGTHFQIPSNSYPLSSHLLRRVSTNFSLCQTLAAALARGVPVLGNLPFLDPELHTYFTELGRKYGPIVKLQLGGKIGIILNSPTVAREVLKDHDITFANRDVPQAGRVATYGGFDITWTPYGPEWRMLRKVCTIKMLSNASLDSVYELRRREVRNTVGHLYRRAGAAVNVGEQGFLTVFNVITSMLWGGTVEGDQKDAFAAEFRGLVSDMTELAGKPNISDFFPSFARFDLQGIEKQVLKLVPKLDTIENDG | 789 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 3803705 | 3807711 | - | ClG42_01g0037900.10 | Clacu01g0379 | 239763 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu01g0379 | 789 | Gene3D | Cytochrome P450 | 40 | 511 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0379 | 789 | Pfam | Cytochrome P450 | 576 | 776 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0379 | 789 | Pfam | Cytochrome P450 | 50 | 506 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0379 | 789 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 452 | 461 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Clacu01g0379 | 789 | SUPERFAMILY | Cytochrome P450 | 575 | 783 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0379 | 789 | SUPERFAMILY | Cytochrome P450 | 50 | 513 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0379 | 789 | FunFam | Cytochrome P450 76C4 | 43 | 509 | - | - | |
| Clacu01g0379 | 789 | PRINTS | E-class P450 group I signature | 329 | 355 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0379 | 789 | PRINTS | E-class P450 group I signature | 193 | 211 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0379 | 789 | PRINTS | E-class P450 group I signature | 372 | 390 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0379 | 789 | PRINTS | E-class P450 group I signature | 413 | 437 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0379 | 789 | PRINTS | E-class P450 group I signature | 101 | 122 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0379 | 789 | PRINTS | E-class P450 group I signature | 309 | 326 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0379 | 789 | PRINTS | E-class P450 group I signature | 459 | 482 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0379 | 789 | PRINTS | E-class P450 group I signature | 77 | 96 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0379 | 789 | PRINTS | E-class P450 group I signature | 449 | 459 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0379 | 789 | Gene3D | Cytochrome P450 | 572 | 785 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0379 | 789 | PRINTS | P450 superfamily signature | 373 | 384 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0379 | 789 | PRINTS | P450 superfamily signature | 450 | 459 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0379 | 789 | PRINTS | P450 superfamily signature | 320 | 337 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g0379 | 789 | CDD | CYP76-like | 78 | 510 | - | - | |
| Clacu01g0379 | 789 | PANTHER | OS08G0547900 PROTEIN | 27 | 521 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu01g0376 | Clacu-Chr1:3793675 | Clacu01g0379 | Clacu-Chr1:3803705 | 7.50E-33 | dispersed | |
| Clacu01g0377 | Clacu-Chr1:3795669 | Clacu01g0379 | Clacu-Chr1:3803705 | 3.20E-232 | dispersed | |
| Clacu01g0379 | Clacu-Chr1:3803705 | Clacu07g1463 | Clacu-Chr7:29277852 | 1.40E-93 | dispersed | |
| Clacu01g0378 | Clacu-Chr1:3801810 | Clacu01g0379 | Clacu-Chr1:3803705 | 6.50E-90 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu01g0379 | - | - | - | 0.0 |