Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu01g0677 | ATGGATAGGGCAAATTTCAAGCACACTGCTTCAGCAATTACTGTCTTTGCACATATTTTTGGTCTCACTGCTTGCATTCTTATGCTTGTTTGGTTGTTGCATTATCGTGGCGGCCTTGCCTACGATTCTCCCAATCCCGACCTTGTTTTCAATTGCCACCCATTCTTCATGCTCCTCGGTTTCGTGTTGATGTCGGGGGAAGCAATGATGGCCTACAAGACAGTGAGGGGAGAAAAGAAAACAAAGAAGATAGTTCACATGGCTCTGCATTTGGTAGCCATTTGCATGGGAATTGTAGGGATAAACGCTGCTTTCAAGTTTCATGATCAAGTGAACTTGGAGAATATGTTCAGTTTACATTCATGGATTGGCATTGTCACTTTCTGCCTTTACGGCTTACAGTGGCTTTTGGGACTATGTACATTCTTGTTTCCAGGAGCAGATGCAGAGACTAAAGCCAGGCTGCTGCCATGGCACATAAGTGGAGGAAGGGCTCTGTTGCTGATGATAATATGCACAGCATTGACTGGCTTCTCTGAGAAGGCTACTTCATTGAGATTGGCTGGCAACCATGAGTCCCGTTTGCTTAACTTCACTGCTTTCTTTGTCCTCCTCTTTGGAATTTCCATCGACCTCTCCATCGGTTTTGCTCGGTTTATGCATGTCGATCTCGCCATTTAG | 681 | 45.08 | MDRANFKHTASAITVFAHIFGLTACILMLVWLLHYRGGLAYDSPNPDLVFNCHPFFMLLGFVLMSGEAMMAYKTVRGEKKTKKIVHMALHLVAICMGIVGINAAFKFHDQVNLENMFSLHSWIGIVTFCLYGLQWLLGLCTFLFPGADAETKARLLPWHISGGRALLLMIICTALTGFSEKATSLRLAGNHESRLLNFTAFFVLLFGISIDLSIGFARFMHVDLAI | 226 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 7320821 | 7322058 | - | ClG42_01g0067700.10 | Clacu01g0677 | 240061 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu01g0677 | 226 | FunFam | Cytochrome b reductase 1 | 7 | 220 | - | - | |
| Clacu01g0677 | 226 | Pfam | Eukaryotic cytochrome b561 | 53 | 183 | IPR006593 | - | |
| Clacu01g0677 | 226 | Gene3D | - | 6 | 216 | - | - | |
| Clacu01g0677 | 226 | CDD | Cyt_b561_ACYB-1_like | 43 | 185 | - | - | |
| Clacu01g0677 | 226 | PANTHER | CYTOCHROME B561-RELATED | 11 | 214 | IPR043205 | GO:0016491(InterPro)|GO:0016491(PANTHER) | |
| Clacu01g0677 | 226 | SMART | 561_7 | 52 | 178 | IPR006593 | - | |
| Clacu01g0677 | 226 | ProSiteProfiles | Cytochrome b561 domain profile. | 16 | 215 | IPR006593 | - | |
| Clacu01g0677 | 226 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 25 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu01g0677 | Clacu-Chr1:7320821 | Clacu09g1349 | Clacu-Chr9:15731851 | 3.90E-49 | dispersed | |
| Clacu01g0677 | Clacu-Chr1:7320821 | Clacu05g2505 | Clacu-Chr5:33141740 | 4.30E-24 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu01g0677 | K08360 | - | csv:101208884 | 416.387 |