Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu01g0689 ATGGCGGGAGTAGAATTGCTGGATATGTTTCCGCATCGGGACCTGGAAGAGGGAGCAACTGCCTCGCCTGATTGGAATCCAACTGATGCTGTGCTGTTTGTTGGACTGAGTTTGGTGCTTGGAATTGCTTGCAGACACCTACTGCGAGGCACAAGAGTTCCTTATACAGTTGCCTTGCTTGTTCTTGGCATAGTTCTTGGATCCATTGAATATGGCACACATCATCAATTGGGAAAGATAGGGGACGGCATACGTCTCTGGGCAAAAATTGATCCTGATCTATTACTGGCTGTTTTCCTCCCTGCTTTGCTGTTTGAAAGTTCCTTTTCAATGGAAGTGCATCAAATAAAGAGGTGTCTGGCCCAAATGATCTTATTGGCTGGTCCAGGTGTTTTAATTTCAACTCTCTTGCTAGGATCTGCTTTCAAGCTCACTTTCCCATATAATTGGAGTTGGAAAACATCATTGTTGCTTGGGGGACTTCTGAGTGCCACAGATCCTGTGGCTGTTGTAGCTCTATTGAAAGAGCTAGGAGCAAGTAAAAAACTGAATACGATAATAGAAGGAGAATCCTTGATGAATGATGGGACAGCAATTGTGGTTTATCAACTTTTTTATCAAATGGTCCTTGGAAAGAGCTTTAATTGGGGAGCTATAATCAAATATCTCACACAAGTCTCGCTGGGGGCTTTGGGAATTGGTCTTGCTTTTGGGATTGCATCTGTTCTATGGCTCGGATTCATTTTCAACGACACAGTGATAGAGATTGCATTAACTCTAGCTGTGAGCTATATTGCTTACTTCACTGCTCAAGAGGGAGCTGATGTGTCCGGTGTTTTGGCGGTGATGACATTAGGAATGTTTTATGCTGCAGTTGCAAGAACAGCTTTTAAGGGTGACGGTCAACAAAGCTTACATCATTTTTGGGAAATGGTTGCTTACATAGCGAATACGTTAATTTTCATATTGAGTGGAGTTGTTATCGCTGAAGGAGTTCTTGGAAGCGAAGGAATTCTTAATAATGGAGCTTCATGGGGCTTCCTCATTCTGCTTTATGTGTATGTGCAAGCTTCTCGATTTATGGTTGTTGGTGTATTGTATCCATTTCTTCGATATTTTGGATATGGCTTGGATTGGAAAGAAGCTACAATACTGATATGGTCAGGTCTGCGTGGTGCTGTTGCTCTGTCACTTTCACTGTCAGTTAAGCGATCAAGTGACCACTCATTGTACATCAGTTCAGAAACTGGAACTCTGTTTCTTTTTTTCACGGGTGGAATTGTATTCTTGACACTTATTGTAAATGGTTCGACCACACAATTCATTTTACATTTTCTGCACATGGACAAGCTCTCCGTGGCTAAGAAACGCATAATGGATTATACAAAATACGAGATGATGAACAAAGCATTGGGCGCCTTTCGAGATCTTGGAGATGATGAGGAATTGGGACCTGCTGACTGGCCTACAGTTAAAAGACATATTACAAGTCTTAGTCACGTGGAGGGGGAACCATTGCACCCGCACAATGCATTTGAAAGTGATCAAAATGTTCACTCTATGAATTTGAGAGACACTCGTCTGCGACTTTTGAATGGTGTTCAAGCTGCTTACTGGGGTATGCTTGATGAGGGAAGGATAACACAAAGTACTGCAAATATCTTGATGCAATCTGTGGATGAAGCCCTTGATCAGGTTGCAAATGAGCCCTTATGTGATTGGAAAGGTTTAAAAGCTAATGTCCATTTTCCAAATTATTACAAGTTCCTTCAGACAAGCATTTTCCCTCGGAAGTTGGTTACATATTTCACTGTGGAAAGATTGGAATCTGGATGTTATATTTGTGCTGCATTTCTCCGTGCACATAGAATTGCAAGACGACAGCTTCATGAGTTTATAGGTGATAGTGATGTTGCTTCTACTGTAATTAATGAAAGTGAGGCTGAGGGTGAAGAAGCACGAAAGTTTCTAGAAGATGTTCGTGAGACATTTCCTCAGGTTTTGCGTGTTGTTAAAACCAGACAGGTAACATATTCAGTGCTCAACCATTTAATTGAATATGTCCAAAATCTGGAGAAGGTTGGCCTATTAGAAGAGAAAGAGATGCTGCATCTTCATGATGCTGTTCAGACTGACTTAAAAAGACTTCTAAGAAATCCTCCTCTGTTAAAGGTTCCGAAAATGCGGAACTTAATCACTGCCCATCCATTTCTTGGGGCACTTCCTCCTTTAGTGCGCGAACCACTTGAAGTTTCCACAAAAGAAGTGATGAAACTACGTGGTGTGACACTTTACAAGGAAGGTTCAAAGCCTAGTGGTGTTTGGCTTATATCCAATGGAGTGGTAAAGTGGGTAAGTAAGAGCATGAGAAACAAGTTCTCCTTGCACCCCACATTTACTCATGGAAGTACTTTGGGCCTATATGAATTGCTTACTGGGAAGCCATGCATCTGTGACATGATTACAGATTCCGTTGTTCTCTCTTTTTTTATTGAACATGATAAGTTTCTGTCAGTACTTAGATCAGATCCTTCGGTTGAAGACTTCTTGTGGCAGGAAAGTTCCATTGTGCTTGCCAAACTCTTGCTTCCACAAGTATTTGAGAAAATGGAAATGAGAGATTTGAGAGTTCTTGTTGTTGAAAGGTCAGTAATGACCACGCATATAGCAGGAGAAACAATAGAAATTCCACGCCATTCTATTGGCCTTTTGTTAGAAGGATTTATCAAAAGTCATGGCATCCAAGAGGAACTAATAGCCTCACCTGCTGTATTGTTCTCCTCGCATGGGAATCCAAGCTTCCATAATATGGAAAACTCAGGGATGAGTGGTTCTAGTTTTTCTCATCAAGGCTCCTATTATGAAGTTGAAACAAGATCAAGAGTAATCATTTTTGACATGGCTGCCCTTCAATCAGATGACAATCTAAATCGGTCATCATCTTTTATACATTCTGTTGATCACCCTCAAAGATCTCTGAGCAGAGATCACTCTGGTCTTATGAGTTGGCCTGAACTGCTTTCCAAGCCTAGACCACCACAGAAGCAGAAATCTGAAAGAACTGAGCGTCCAGCTGATAGCTTGTCTGAAAAGGCTATGCAACTAAGCATATACGGTAGCAGCATGGTTGATATTCGTCAGCGGACTAAGAGTTTTCCAGGCAACACTGCTGAACCATCTCATAGCCGGTCAAATCCTGCAATTGGTTCATATAAAGGTATTCCCCTTCCATATGTGAAATCAGAAGGAGCTGCTACATTGAAGAAGAGGCTTGATGCAAGAAAGTTACCAATAAGCACTGTTCGGCCCCCACAAGAAAAACCAGCTCCTGATGAGAGAAATGCAAGAGATGATTCAAGTGAGGAATCTGGTGGTGAGGATGATATCATTGTGAGAATTGATTCACCAAGTGTGCTTTCATTTCACCAGCGGCTTCAACAGCTGGAATCAACATTGTATATTGTGTGGTGCGATGTAGAAATATCATTGGTTACTGAGCCATCTTCTCAAGAATTTTCAAACTGGAGTTCTCAAGAGAGCAAAAAGTATTCTGTGCTAAGCCCAAGAAAATGCCTAATGTAA 3582 41.54 MAGVELLDMFPHRDLEEGATASPDWNPTDAVLFVGLSLVLGIACRHLLRGTRVPYTVALLVLGIVLGSIEYGTHHQLGKIGDGIRLWAKIDPDLLLAVFLPALLFESSFSMEVHQIKRCLAQMILLAGPGVLISTLLLGSAFKLTFPYNWSWKTSLLLGGLLSATDPVAVVALLKELGASKKLNTIIEGESLMNDGTAIVVYQLFYQMVLGKSFNWGAIIKYLTQVSLGALGIGLAFGIASVLWLGFIFNDTVIEIALTLAVSYIAYFTAQEGADVSGVLAVMTLGMFYAAVARTAFKGDGQQSLHHFWEMVAYIANTLIFILSGVVIAEGVLGSEGILNNGASWGFLILLYVYVQASRFMVVGVLYPFLRYFGYGLDWKEATILIWSGLRGAVALSLSLSVKRSSDHSLYISSETGTLFLFFTGGIVFLTLIVNGSTTQFILHFLHMDKLSVAKKRIMDYTKYEMMNKALGAFRDLGDDEELGPADWPTVKRHITSLSHVEGEPLHPHNAFESDQNVHSMNLRDTRLRLLNGVQAAYWGMLDEGRITQSTANILMQSVDEALDQVANEPLCDWKGLKANVHFPNYYKFLQTSIFPRKLVTYFTVERLESGCYICAAFLRAHRIARRQLHEFIGDSDVASTVINESEAEGEEARKFLEDVRETFPQVLRVVKTRQVTYSVLNHLIEYVQNLEKVGLLEEKEMLHLHDAVQTDLKRLLRNPPLLKVPKMRNLITAHPFLGALPPLVREPLEVSTKEVMKLRGVTLYKEGSKPSGVWLISNGVVKWVSKSMRNKFSLHPTFTHGSTLGLYELLTGKPCICDMITDSVVLSFFIEHDKFLSVLRSDPSVEDFLWQESSIVLAKLLLPQVFEKMEMRDLRVLVVERSVMTTHIAGETIEIPRHSIGLLLEGFIKSHGIQEELIASPAVLFSSHGNPSFHNMENSGMSGSSFSHQGSYYEVETRSRVIIFDMAALQSDDNLNRSSSFIHSVDHPQRSLSRDHSGLMSWPELLSKPRPPQKQKSERTERPADSLSEKAMQLSIYGSSMVDIRQRTKSFPGNTAEPSHSRSNPAIGSYKGIPLPYVKSEGAATLKKRLDARKLPISTVRPPQEKPAPDERNARDDSSEESGGEDDIIVRIDSPSVLSFHQRLQQLESTLYIVWCDVEISLVTEPSSQEFSNWSSQESKKYSVLSPRKCLM 1193
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7541584 7562740 + ClG42_01g0068900.10 Clacu01g0689 240073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu01g0689 1193 PANTHER SODIUM/HYDROGEN EXCHANGER 23 769 IPR018422 GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0009941(PANTHER)|GO:0015385(PANTHER)|GO:0015385(InterPro)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro)
Clacu01g0689 1193 MobiDBLite consensus disorder prediction 1050 1067 - -
Clacu01g0689 1193 ProSiteProfiles cAMP/cGMP binding motif profile. 737 840 IPR000595 -
Clacu01g0689 1193 MobiDBLite consensus disorder prediction 1050 1074 - -
Clacu01g0689 1193 Gene3D - 151 203 - -
Clacu01g0689 1193 MobiDBLite consensus disorder prediction 1002 1031 - -
Clacu01g0689 1193 Pfam Sodium/hydrogen exchanger family 37 443 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Clacu01g0689 1193 SUPERFAMILY cAMP-binding domain-like 724 851 IPR018490 -
Clacu01g0689 1193 MobiDBLite consensus disorder prediction 1012 1027 - -
Clacu01g0689 1193 Gene3D Jelly Rolls 703 863 IPR014710 -
Clacu01g0689 1193 MobiDBLite consensus disorder prediction 1106 1129 - -
Clacu01g0689 1193 FunFam Sodium/hydrogen exchanger 7 724 861 - -
Clacu01g0689 1193 Pfam Cyclic nucleotide-binding domain 760 843 IPR000595 -
Clacu01g0689 1193 MobiDBLite consensus disorder prediction 1095 1129 - -
Clacu01g0689 1193 CDD CAP_ED 737 846 IPR000595 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu01g0689 K14726 - csv:101209966 2108.18