Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu01g0773 ATGGGTGATGGTGTGAGACCCTCGCAGAAAAATGGGTTCGAATCTATTGCCCCAAAGACCCACCGAATTCCAATTTCAACCCGAAATAGGCGAAGAAAGAAGAAAGGGCCAAAGAAGAGAGAAAGAACGGAAGAACATCTCAACTTCGGCTTCAAGTTCCAGAGCGAAGCCCAGATTCCATTGTTGCAACTCGCCCCAGAGTTTCCTTCTAATCTCTTCATCTCTGTAGCCCGCGACAACCCTCTTTTTCCCCTTTTCATTCTTCCATATTCGCTGATTATGCCAGACGTGCAAGCCCTTGTGAATGATTTCGTTATCAAGCTTAAGAGGCGTAAAATTGAAGGCTCCTTGGCTACAGCGAAGCATACGGCTGAATTGCTTCGTTCTGTTATTTCGCAGCAGCGAATACCCTACACGAATCAGGCGGCTGCTTTGATTGATGCTGTGAAAGCTGTTGGCGAGCAGCTGATTGCTGCGAATCCTGTTGAGCTTGCTGTGGGTAATATTGTGAGGCGGGTTTTGCACATTATCAGAGAGGAGGATCTCTCTCTCACTACAGCTTCTATTGCTGGGTTAAGCTTATCAGCAGTTAGTGATGATGAAGATGACACTGAAAAAGATGATCGCCCGGTCCTCTCAGCTGCTGCTGTTGCAGCTGCTGCAAGAAGCACTTTGCGGCCACCTTCCTTGCAAACTCTTCTTGAGGATGTTCCTAATCAAACATCGATTCATCAAACTTCATCATCTGGAGGCGATTCAGAAGGAAAAAGCAAATCTGCTGATAAAAGTTCGAGGAGTCGAAAACTCAAGCATGATGTAATTGAAGCTGTTAATGAGCTTATTCAGGATATTGCAACTTGTCATGAACAGATTGCTGAACAAGCAGTGGAGCACATTCATCAGAACGAGGTAATATTAACTTTGGGGAGTTCCAGAACAGTATTGGAATTTCTTTGTGCTGCTAAGGAGAAGAAAAGGTCCTTCCGGGTGTTTGTTACTGAGGGTGCTCCAAGATATCAGGGTCATCTTCTTGCTAAGGAGTTGGTTACAAGAGGTTTACAGACCACACTTATTACTGATTCTGCAGTTTTTGCTATGATTTCCCGGGTGAATATGGTAATAGTTGGAGCTCATGCTGTCATGGCAAATGGTGGTGTCATGGCACCAGTCGGATTGAATATGGTGGCCCTTGCAGCTAAAAGGCATGCTGTTCCTTTTGTCGTGCTAGCTGGAAGTCACAAGTTATGCCCTTTGTATCCTCACAATCCGGAAGTTCTACTCAATGAACTGAGGTCCCCATCAGAGCTACTGGACTTTGGTGAATTTTCAGATTGCATGGACTTTGGAACGAACAATGGTTCTCCTCTTCTCCATGTAGTCAACCCTACATTTGACTATGTGCCACCATCACTTGTTAGTTTATTTATTACTGACACAGGTGGCCATAACTCATCATACATGTATCGGCTTATTGCTGATTATTATTCAGCTGATGATTTGAGTTTTCTAGCTGGGCTGAAGGTGTTGGCGTGGAAAGTTGAAACAATGGAAATTGATGTTTTCTTTTTTGTTGTTGTTGTTTGCTTTACTGCCTCAGGCCAGAATTGTTTCTGCAGATCACTGCCAGAATCAATGAATCACAGATAA 1647 44.14 MGDGVRPSQKNGFESIAPKTHRIPISTRNRRRKKKGPKKRERTEEHLNFGFKFQSEAQIPLLQLAPEFPSNLFISVARDNPLFPLFILPYSLIMPDVQALVNDFVIKLKRRKIEGSLATAKHTAELLRSVISQQRIPYTNQAAALIDAVKAVGEQLIAANPVELAVGNIVRRVLHIIREEDLSLTTASIAGLSLSAVSDDEDDTEKDDRPVLSAAAVAAAARSTLRPPSLQTLLEDVPNQTSIHQTSSSGGDSEGKSKSADKSSRSRKLKHDVIEAVNELIQDIATCHEQIAEQAVEHIHQNEVILTLGSSRTVLEFLCAAKEKKRSFRVFVTEGAPRYQGHLLAKELVTRGLQTTLITDSAVFAMISRVNMVIVGAHAVMANGGVMAPVGLNMVALAAKRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDFGTNNGSPLLHVVNPTFDYVPPSLVSLFITDTGGHNSSYMYRLIADYYSADDLSFLAGLKVLAWKVETMEIDVFFFVVVVCFTASGQNCFCRSLPESMNHR 548
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8374686 8383971 + ClG42_01g0077300.10 Clacu01g0773 240157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu01g0773 548 Pfam Initiation factor 2 subunit family 112 482 IPR000649 GO:0044237(InterPro)
Clacu01g0773 548 MobiDBLite consensus disorder prediction 24 39 - -
Clacu01g0773 548 MobiDBLite consensus disorder prediction 236 254 - -
Clacu01g0773 548 MobiDBLite consensus disorder prediction 1 44 - -
Clacu01g0773 548 SUPERFAMILY NagB/RpiA/CoA transferase-like 97 499 IPR037171 -
Clacu01g0773 548 FunFam translation initiation factor eIF-2B subunit beta 287 495 - -
Clacu01g0773 548 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 96 500 IPR051855 GO:0003743(PANTHER)|GO:0005085(PANTHER)|GO:0005851(PANTHER)|GO:0006413(PANTHER)
Clacu01g0773 548 Gene3D - 287 494 IPR042529 -
Clacu01g0773 548 MobiDBLite consensus disorder prediction 255 269 - -
Clacu01g0773 548 MobiDBLite consensus disorder prediction 236 269 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu01g0773 K03754 - csv:101220366 738.413