Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu01g0951 ATGGTTGCTTTCTCATATTCATCACCTCATTCCAATGGAGATCCAAAGGCAATAGAAAAGATTAAGAACCAAAAGACAATAATTTATCCCAATGGTTTCAACATCACATGGGGCAACGACAACCGTTATTGGCGCTTACCTCGTCAATCTCGTAACTTGAAGGAGTCGAGTGCAGCAGCAGAGTTACTACAAGTGTCATGGTTCGAGGTGACATGTTCAACAGACAATGTGGATGTCGGAAAAAGCTACAGAGTTGGGTTCAACCTATCCATGACAGTCGCAGCTTTTGGCTGGAAAGGATGTGAAGTTTACATAATGGCCAAGATTGGGAAGGCAGGGAAATTTGTGTACAAGAAGGTGTGTCTTGACACTCGATGCTCTGATCAGAACAAGTTCAATATGCCGGAAGATGATCTAATTATCACCGTGAACCCTCCGCCGAGTTCACCGGGAGACAACCGTCTCTACTTTGGAATGTACGAGGTTTGGAGTGGGAGATGGAAGGGAGGACTCAAAATCCACCATGCATTTGTCGAGAAGGTTGGAAACTAG 552 44.75 MVAFSYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDTRCSDQNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKVGN 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11870280 11871520 + ClG42_01g0095100.10 Clacu01g0951 240335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu01g0951 183 Pfam Phloem protein 2 26 175 IPR025886 -
Clacu01g0951 183 PANTHER F-BOX DOMAIN-CONTAINING PROTEIN 24 176 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu01g0951 Clacu-Chr1:11870280 Clacu01g2665 Clacu-Chr1:36789135 6.00E-32 dispersed
Clacu01g0950 Clacu-Chr1:11755273 Clacu01g0951 Clacu-Chr1:11870280 7.70E-88 tandem
Clacu01g0951 Clacu-Chr1:11870280 Clacu01g0952 Clacu-Chr1:11917816 1.10E-65 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu01g0951 - - - 0.0