Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu01g0994 ATGATAATGGAGGATTCACACAATAAGCTTCTAGAAAACACTATAAAAAGCTACACAAAGCTCCATAGCTTCAAGCAAATTTTCAATGGCTTTGCAGTTCACACAACCCCATCACAAGCCTCAAAGCTTAGAGAAGTTGATGGAGTGAAATTGGTTGAGTTAGATAGAGGAGTGAGGAAAATGACTACTTATACCCCTGAGTTTCTAGGACTAGTGCCCTCCAATAATCATAAATATTATTATAATTATAGTGTTATTGGTGGTGGTGGTGAAGGCATTTTGATTGGGTTTGTGGACTCTGGTATTTACCCAACACACCCAAGTTTTAGTTTTGGTAATTTTGATCATCAAGAAGAGGAGTTGTTTTGTGGGGTTTGTGAAGAAGGTCCTTTTTTCCCAAAAGCTTCTTGCAATGGGAAGATAGTGAGTGCAAGGTTTTTCTCTAATGGGGCTCAGGCTATTGCAAAGCTTAACTCTTCCCTTGATTTTCTCTCTCCATTTGATGCTGAAGGCCATGGAAGCCATGTGGCATCCATAGCTGCTGGGAATGCAGGTGTTCCAGTTATTGTAAATGGTTTCTTCTATGGATTGGCCAGTGGAATCGCGCCACGTGCACGAATTGCTGTTTACAAGGCCGTGTATCCAACCGTGGCTACTCTAACCGACGTAATTTCAGCAATAGATCAAGCAGTGGTTGATGGGGTTGATATATTGGCATTATCAGTTGGACCAAATGAACCGCCCGAGGTAGGATTTACCTTCCTAAGCATATATGACATTGCCATATTATCTGCTACAAGAGCTGGAATCCTTGTTGTTCAAGCAGCCGGAAATAATGGCCCTGCCCGGGCAACCGTCGTCTCTTACAGCCCTTGGGCTATTGGCGTTGCAGCCTCCGGCACCGACAGAGTTTATTTGGCCTCACTTCTTCTCGGCAATGGCCAAAAAATTGCAGGAGTAGGACTGTCTGGACCTACCTTAGGGAGGGAGTTTTTCCTACACAAGTTAGTATTGGCTGAGGATGCAAGGAGGTCAAATGAAACACATCCCAACGTACCAAATTACAATGAAGAGTGCCAAAATCCCGAAGCTTTTGACCCAAATATTGTTGAAAACAGCATAGTCCTCTGCTCTTTCTCACAAGGATTCCTCAATGGAACCTCCTCTCTTAAAGCCATCATTCGCACTGCAACAACACTCAGATTCATGGGTTTTGTTCTCCTTGCAAATCCACACTATGGTGATTTCATTGCAGAGCCCATCCCTTTCAAAGTTCCAGGCATACTCGTCCCGACCGTATCAGATACTAAGGTGATACTGAAATACTATGAAGAAAATACATGGAAGGATAGAAGGGGAATTGTTAGTGAATTTAAAGGGAAAGCAGGCATTGGAGAAGGAAGAGTTGCTTCATTTGGAAGGCAAGCAGCCAGTGTTAGCAGATTTTCATCAAGAGGACCAGATTACATCAACATAAATAGGACTATAGCTGATATACTAAAGCCTGATATTCTTGCACCAGGTCACCAAATCTGGGCTGCTTGGAGCCCTCTTAGTGGCTCACAGCCACTTTTAAAGGGATACCATTTTGCACTGTTATCTGGAACAAGTATGGCAGCACCTCATATTGTGGGAATAGCAGCACTTATCAAGCAAAAGTATCCTTCTTGGACTCCTTCCATGATAGCTTCTGCAATGTCCACAACTGCTACAAAGTATGATATGAATGGAGACCTTATTCAGGCAGAGGGATTCAACCTTCATAGTTTATATCCTTCTACTCCCTTCGACTTTGGCGCTGGCCTCGTTTCTCCGACCAACGCTTTGGACCCGGGACTCGTCTTCCCTTCAGAATATGAAGACTATATAAACTTCTTGTGCTCTTTACCTGGGGTTGATCCTACTGTCATCAGAAGTGCCACCGGAGGACAGTGCAATGCCTCTATCCCACAGCCACACCCTGCAGATCTGAACCTTCCTTCAGTCACCATATCATCATTGGTTGGGAATCAGGTAGTGCAGAGAAGAGTGAAGAATGTAGGAGGCAAAGTGGAGACTTATGTGTGGTCAGTGATACCGCCAAATGGGACAACAGTCAACATCAATCCGCCATGGTTCACCGTAGCGCCCGAAGAAGTCCAAAACTTGGAAATACAAATCAATGTCACACACAAAATGGATCATTTTACCTTCGGGGAGATTATTTTGACAGGAAGTTTAAACCATATTGCAAGAATCCCTTTGTCAGTTTTGGCTGTTTCTGCATCCTGA 2271 43.81 MIMEDSHNKLLENTIKSYTKLHSFKQIFNGFAVHTTPSQASKLREVDGVKLVELDRGVRKMTTYTPEFLGLVPSNNHKYYYNYSVIGGGGEGILIGFVDSGIYPTHPSFSFGNFDHQEEELFCGVCEEGPFFPKASCNGKIVSARFFSNGAQAIAKLNSSLDFLSPFDAEGHGSHVASIAAGNAGVPVIVNGFFYGLASGIAPRARIAVYKAVYPTVATLTDVISAIDQAVVDGVDILALSVGPNEPPEVGFTFLSIYDIAILSATRAGILVVQAAGNNGPARATVVSYSPWAIGVAASGTDRVYLASLLLGNGQKIAGVGLSGPTLGREFFLHKLVLAEDARRSNETHPNVPNYNEECQNPEAFDPNIVENSIVLCSFSQGFLNGTSSLKAIIRTATTLRFMGFVLLANPHYGDFIAEPIPFKVPGILVPTVSDTKVILKYYEENTWKDRRGIVSEFKGKAGIGEGRVASFGRQAASVSRFSSRGPDYININRTIADILKPDILAPGHQIWAAWSPLSGSQPLLKGYHFALLSGTSMAAPHIVGIAALIKQKYPSWTPSMIASAMSTTATKYDMNGDLIQAEGFNLHSLYPSTPFDFGAGLVSPTNALDPGLVFPSEYEDYINFLCSLPGVDPTVIRSATGGQCNASIPQPHPADLNLPSVTISSLVGNQVVQRRVKNVGGKVETYVWSVIPPNGTTVNINPPWFTVAPEEVQNLEIQINVTHKMDHFTFGEIILTGSLNHIARIPLSVLAVSAS 756
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 13140100 13151493 - ClG42_01g0099400.10 Clacu01g0994 240378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu01g0994 756 ProSitePatterns Serine proteases, subtilase family, serine active site. 535 545 IPR023828 -
Clacu01g0994 756 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 8 709 IPR045051 -
Clacu01g0994 756 Pfam Subtilase family 90 576 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Clacu01g0994 756 Gene3D - 626 753 - -
Clacu01g0994 756 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 95 106 IPR023827 -
Clacu01g0994 756 Pfam Peptidase inhibitor I9 8 59 IPR010259 -
Clacu01g0994 756 SUPERFAMILY Subtilisin-like 61 613 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu01g0994 756 ProSiteProfiles Serine proteases, subtilase domain profile. 66 609 - -
Clacu01g0994 756 CDD PA_subtilisin_like 308 447 - -
Clacu01g0994 756 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 59 IPR037045 -
Clacu01g0994 756 Pfam Fibronectin type-III domain 656 750 IPR041469 -
Clacu01g0994 756 Gene3D Peptidase S8/S53 domain 92 622 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu01g0994 756 Gene3D - 302 472 - -
Clacu01g0994 756 ProSitePatterns Serine proteases, subtilase family, histidine active site. 172 182 IPR022398 -
Clacu01g0994 756 PRINTS Subtilisin serine protease family (S8) signature 90 109 IPR015500 -
Clacu01g0994 756 PRINTS Subtilisin serine protease family (S8) signature 168 181 IPR015500 -
Clacu01g0994 756 PRINTS Subtilisin serine protease family (S8) signature 534 550 IPR015500 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu01g0994 Clacu-Chr1:13140100 Clacu11g1370 Clacu-Chr11:23999067 4.60E-163 dispersed
Clacu01g0994 Clacu-Chr1:13140100 Clacu09g0110 Clacu-Chr9:1017185 1.40E-82 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu01g0994 - - - 0.0