Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu01g1023 ATGGATTCTAGCACGAGTGGAGGCAGTTATCACACACAGGCCAAATGGAGAAAAGTGGCATATGGAGGTATGCAACCTGGGTTTGATGACAACCACACTGACGAGTCTTTTCTTGAAGATATTGTCATGAATGCCAATGTCGTCAAGAGAGATATCCTAAAGGTGATGTTGGACTCTGTTTCCATATCCGAATATCTGTGCATCGTCACTCTTGTTGGCTTGGTTTGGACATACACACTTAGATCGACTCTTGATGAGAATTCCCTCTTATTTCTTGACATTGGCCTTCTTGGTTCAGGATTTCTAATTCTTCTTTTCACTGAAGGCTCACTCTCATTGAGCCTTCTCTTGCACTATTTTCTTAATATATCCTATTTCACAACGGGGTTGTATGTCTTAGCTCCCATCTACCAAACTCTGACTAGATCCATTAGCTCAGATTCCATTTGGGCATTGGCTGTTTCACTTATTATCCTTCATCTCTTCCTACATGACTACTCAGGTTCCACTGTTAGGGCTCCTGGGGATCTTAAGAATCCAAGCTTAACCAGTTGCATTTCTTTAAATGCTTCTATCGTGGCCTCTGTTCTTATCGCTTCACGTCTGCCATCTCGACTACATGTGTTCGGCATTATGTTGTTCTCATTGCAAGAATTTAAGTTTGAGATCAATGGTCCCTGGGACGAGGCCAAGCTTTGTTTTGATATTAGAGATTGA 717 41.98 MDSSTSGGSYHTQAKWRKVAYGGMQPGFDDNHTDESFLEDIVMNANVVKRDILKVMLDSVSISEYLCIVTLVGLVWTYTLRSTLDENSLLFLDIGLLGSGFLILLFTEGSLSLSLLLHYFLNISYFTTGLYVLAPIYQTLTRSISSDSIWALAVSLIILHLFLHDYSGSTVRAPGDLKNPSLTSCISLNASIVASVLIASRLPSRLHVFGIMLFSLQEFKFEINGPWDEAKLCFDIRD 238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 13902292 13903203 - ClG42_01g0102300.10 Clacu01g1023 240407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu01g1023 238 Pfam Phosphatidylinositol N-acetylglucosaminyltransferase 16 219 IPR009450 GO:0006506(InterPro)|GO:0016020(InterPro)
Clacu01g1023 238 PIRSF PIG-C 214 238 IPR009450 GO:0006506(InterPro)|GO:0016020(InterPro)
Clacu01g1023 238 PIRSF PIG-C 4 221 IPR009450 GO:0006506(InterPro)|GO:0016020(InterPro)
Clacu01g1023 238 PANTHER PHOSPHATIDYLINOSITOL GLYCAN, CLASS C 214 237 IPR009450 GO:0000506(PANTHER)|GO:0006506(InterPro)|GO:0016020(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu01g1023 K03859 - csv:101221254 392.119