Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu01g1276 ATGTCGGGCAGCGAATTACTCTTCTCTCTGCCCACCGCAATTTCCCTTCTCTTCTTCTCCTTCACGGCGGCCTTCACGATTTTCTCTTTCTCTCTTTACATCCTCCGCCTTAACCCATGCTGCAATTGCTGTGTTTGCCGCAGCTATCTTTCTTCTTCGTGGTCTTTCTCTTTCCCTAACTTATCAGATTGGTACACTCACCTTCTTTCCCTTTCCCCCACCGCCACCATCCACCTCCACGTCCTCTCCAACATCGTCACCGCCAACCCCGACAACGTCCAACACATCCTCAAATCCAACTTTCATAACTATCCCAAAGGAAAACCATTCTCTTCCATCCTCGGCGACCTTCTCGGTCACGGCATTTTCAACGTCGATGGTCATTCTTGGCGGTTCCAACGCAAGATGGCTAGCTTGGAACTCGGGAGCTTGTCGCTGCGGTCTCACGCTTTCGAGATTTTAACTACTCAGATTCAGACAAGGTTGGTTCCTGTGATGAAGGATGTTGGGGAAGTGGATTTGCAAGATGTGTTTAGGAGGTTTTCGTTTGATAATATTTGTAGATTTTCATTTGGGTTGGATCCGGGGTGTTTAAGGTTGTGTTTGCCCATATCGGAGTTTGCGGTGGCGTTTGATTTGGCGTCGAGGTTATCGGCGGAAAGGGCTATGGCGGCGTCGCCGATTATGTGGAAGATTAAGAGGGTTTTGAGAGTGGGATCGGAGAGGAAGCTTAGGGAAGCTATTAAGATGGTGGATGGGTTAGCGATGGAAGTTATAAGGCAACGGAGGGAGATGGGGTTTTCACATAGGAATGATCTTCTCTCTAGATTCATGGCTTCTACCAATGATGATCGATATCTTAGAGACATTGTTGTTAGCTTTCTCCTCGCCGGTCGGGACACGGTGGCGTCGGCGTTGACTAGCTTATTCTGGCTACTTTCCCAAAACCCGGAAGTAGAGACTAAAATTATCTCCGAGTCAGACCGGATCATGGGACCGGACCGAGACACGGTCCCCAATTTTGACAATCTTAAGGACATGCACTACCTCCAAGCAGCGGTCTACGAAAACATGCGTCTCTTTCCACCCGTTCAGTTCGATTCCAAGTTTGCCGAGGAAGACGACATCTTGCCGGACGGTACATTTGTCCAAAAGGGCACTAGGGTAACTTACCACCCCTACGCCATGGGCCGAATGGACCGGATTTGGGGACCCGATTGTCTCGAGTTCAAACCAGAGAGGTGGCTCAAGAATGGCTACTTTGCGCCCGAAAACCCGTTTAAGTTCCCGGTTTTTCAAGCCGGTTTAAGGGTTTGTTTAGGTAAGGAGCTAGCCGTGATGGACGTGAAATGTGTCGCAGTGGTATTGATTCGGAAGTTTAAGATCCGGTTGGCAGAAGCCGATCGGGTTGCTCGGTTTGCTCCCGGTCTAACGGCTAGCTGGAGAGGTGGGTTACCGGTTCGAATTGAAGAAAGAACCACTTGTTAA 1488 49.53 MSGSELLFSLPTAISLLFFSFTAAFTIFSFSLYILRLNPCCNCCVCRSYLSSSWSFSFPNLSDWYTHLLSLSPTATIHLHVLSNIVTANPDNVQHILKSNFHNYPKGKPFSSILGDLLGHGIFNVDGHSWRFQRKMASLELGSLSLRSHAFEILTTQIQTRLVPVMKDVGEVDLQDVFRRFSFDNICRFSFGLDPGCLRLCLPISEFAVAFDLASRLSAERAMAASPIMWKIKRVLRVGSERKLREAIKMVDGLAMEVIRQRREMGFSHRNDLLSRFMASTNDDRYLRDIVVSFLLAGRDTVASALTSLFWLLSQNPEVETKIISESDRIMGPDRDTVPNFDNLKDMHYLQAAVYENMRLFPPVQFDSKFAEEDDILPDGTFVQKGTRVTYHPYAMGRMDRIWGPDCLEFKPERWLKNGYFAPENPFKFPVFQAGLRVCLGKELAVMDVKCVAVVLIRKFKIRLAEADRVARFAPGLTASWRGGLPVRIEERTTC 495
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 22650366 22653078 + ClG42_01g0127600.10 Clacu01g1276 240660
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Clacu01g1276 495 PANTHER CYTOCHROME P450 38 484 - -
Clacu01g1276 495 SUPERFAMILY Cytochrome P450 55 492 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g1276 495 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g1276 495 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g1276 495 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g1276 495 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g1276 495 CDD CYP86A 73 485 - -
Clacu01g1276 495 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g1276 495 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g1276 495 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g1276 495 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g1276 495 Gene3D Cytochrome P450 57 494 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g1276 495 Pfam Cytochrome P450 73 469 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu01g1276 Clacu-Chr1:22650366 Clacu10g1629 Clacu-Chr10:29650224 2.60E-106 dispersed
Clacu05g1505 Clacu-Chr5:18462888 Clacu01g1276 Clacu-Chr1:22650366 9.30E-99 transposed
Clacu06g1882 Clacu-Chr6:29264809 Clacu01g1276 Clacu-Chr1:22650366 2.90E-114 transposed
Clacu07g0067 Clacu-Chr7:1067521 Clacu01g1276 Clacu-Chr1:22650366 2.00E-101 transposed
Clacu10g1892 Clacu-Chr10:32508237 Clacu01g1276 Clacu-Chr1:22650366 4.80E-177 transposed
Clacu01g1276 Clacu-Chr1:22650366 Clacu11g0946 Clacu-Chr11:9379073 1.90E-80 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu01g1276 K20624 - csv:101207724 887.486