Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu01g1302 ATGTTTGCTAAAAATCTCCACTTCTTCTTTTGGCTCTTACTTTCTCTTCTCATTCTTCACTCAACATCATCATCATCATCTATTTCTTCACAAGTGTATATAGTGTACTTAGGGCACAACCGTTTGAGTGATGATGCAACTTTGACCTCCAAATACCATCTTCATCTACTCTCAAAAGTGTTTGCAAGTGAAGAAGGTGGTAAAAGAGCCATGTTGTATAGTTACAAGAAAAGTTTTTCGGGGTTCTCAGCAAAGCTTAATGCAAGCCAAGCAATAGCATTATCAAAGATGGAAGGAGTGATATCCGTATTCGAGAGTAAAACAATGCAACTTCACACAACAAGAAGTTGGGATTTCTTGGGCCTTCCTATAATTCCCTCATATACTAATAATATTAAACCATTATTTCCACTTCGCCTTCCTAGCTATGGCGATCACGATGTTGTTGTTGGCATCTTCGATTCAGGTGTGTGGCCAGAATCTGAAAGTTTCAAGGAGAGTGAGGAGAGGGGGAGACTTCCATGCAATTGGAAAGGCTTCGAAGCCCAATACGGAGCCCTCAACACCACCGCCGGCAACCCCGAGTTCCGCTCCCCTCGAGACTTCTTAGGTCATGGAACTCACACCGCTTCCACTGCGGTGGGTGCGGTCGTGCATAATGTCACCTTCACTACATCTTCATCACTGGCTAAAGGCATTGCCCGAGGTGGGGCTCCCTGGGCCAGGCTGGCAGTGTACAAAGTGTGTTGGGGAAAGGACTACGAGGGCAAGTGCACCGATGCCGACGTCATGGCCGCTTTCGACGACGCTTTGCACGACGGAGTGGACGTCATCTCCGCCTCGTTTGGAGAGACGCCGCCGTTGGCTCCGTTGTTTGAGTCGGCCTCGGCTATTGGCTCATTCCATGCGATGCAGCGGGGAGTGAGCGTGGTGTTCTCTGCTGGGAATGATGGACCCCACCCTTCCCTTGTTCAAAATGTGTCTCCTTGGAGTATTTGTGTTGCTGCTTCTACTATGGATCGAACTTTTCCCACTCCAATACTTATTCACAACCATTTCTCAATCATGGGGGAGAGCTTGATCACAAGAAATATAATAAACGTAAAGCTGGCAGATTCAATCAACTATTTCATAGATGGAATTTGTGAGAGAGACAACATAAGGAAAGGAGGGAAGTCGGGTAAAGGGAAAGTGGTAGTCTGTTTCTCAACCATTGGCCCAGTTTCCATAGGAACTGCACAAGAAGCAGTGAGAGCCATCAATGGCTCCGCTTTAATATTTGGTGCGCCCCCCACGACGGAGCTCCCAGATCTAGATCTCATCCCCACCGTTCGAATTGACATTGCTCAGGCGACTCAAATTCGAAACTTTCTTGCTGAATTACCCAGACTGCCGGCCGTCGAGATCGGCGTCGCGAGAAGTGTGATTGGGAAATCCGTAGCTCCTAGTGTGGCTTACTTTTCATCCAGAGGACCAAGCTCTATCTTACCTGACATTCTCAAGCCAGATATAAGTGCCCCAGGAGTGAACATATTGGCAGCATGGCCTCCGGAAACAGCTCCGACGGTGAGGCCAAGTGGAAGCGTTATTGAAGAAGAAGGTGTAAAATGGAATTTCCAGTCAGGGACTTCAATGTCATGTCCTCATATCTCTGGAGTAGTTGCCCTTATCAAATCTCTTCATCCCCATTGGTCACCTGCCGCCATTAGATCTGCCATCATCACCACAGCCACGAAGAGGGACTCTAGTGGGAATAGCATCCTAGCAGGCGGATCCATGAAACCATCAGACCCATTTGACGTTGGTGCAGGTCAAGTGAACCCCTTAAAGGCCATAAATCCAGGTCTAATCTACGACATCACAACCAGCGATTACATTAGTTTCCTATGCAATATTGGGTATACAGAACAACAAATCAAGATGCTAATTCTCAACCCTTCTCCTCAATTTTGTTGTCCTCCTCAATCCACTACTACCATTAATATTGCAAATCTTAATTATCCGTCAATTACACTTACAAATCTTGGCTCTACCATCACACTCAAAAGAATTGTCCGCAATGTATCACTCAACAAAAACGCCATTTACTTTCTTAGGATTCTTCCTCCCAAGGGAGTCCGAGTACAAGTCTGGCCAAGGATCCTGCTTTTCTCTTGCTTTAGGCAACACCTTTCTTACTATATTACCATAACTCCGCTCAAGAAATCTCGAGGTAGATATGATTTTGGGGAGATTCAATGGTTTAATCGCTTCCATACTGTCACAAGTCCTCTCGTTGTACGTCTTGCCACTTCTACATAA 2301 46.2 MFAKNLHFFFWLLLSLLILHSTSSSSSISSQVYIVYLGHNRLSDDATLTSKYHLHLLSKVFASEEGGKRAMLYSYKKSFSGFSAKLNASQAIALSKMEGVISVFESKTMQLHTTRSWDFLGLPIIPSYTNNIKPLFPLRLPSYGDHDVVVGIFDSGVWPESESFKESEERGRLPCNWKGFEAQYGALNTTAGNPEFRSPRDFLGHGTHTASTAVGAVVHNVTFTTSSSLAKGIARGGAPWARLAVYKVCWGKDYEGKCTDADVMAAFDDALHDGVDVISASFGETPPLAPLFESASAIGSFHAMQRGVSVVFSAGNDGPHPSLVQNVSPWSICVAASTMDRTFPTPILIHNHFSIMGESLITRNIINVKLADSINYFIDGICERDNIRKGGKSGKGKVVVCFSTIGPVSIGTAQEAVRAINGSALIFGAPPTTELPDLDLIPTVRIDIAQATQIRNFLAELPRLPAVEIGVARSVIGKSVAPSVAYFSSRGPSSILPDILKPDISAPGVNILAAWPPETAPTVRPSGSVIEEEGVKWNFQSGTSMSCPHISGVVALIKSLHPHWSPAAIRSAIITTATKRDSSGNSILAGGSMKPSDPFDVGAGQVNPLKAINPGLIYDITTSDYISFLCNIGYTEQQIKMLILNPSPQFCCPPQSTTTINIANLNYPSITLTNLGSTITLKRIVRNVSLNKNAIYFLRILPPKGVRVQVWPRILLFSCFRQHLSYYITITPLKKSRGRYDFGEIQWFNRFHTVTSPLVVRLATST 766
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 23399807 23408127 + ClG42_01g0130200.10 Clacu01g1302 240686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu01g1302 766 PRINTS Subtilisin serine protease family (S8) signature 201 214 IPR015500 -
Clacu01g1302 766 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Clacu01g1302 766 PRINTS Subtilisin serine protease family (S8) signature 145 164 IPR015500 -
Clacu01g1302 766 CDD Peptidases_S8_3 110 578 IPR034197 -
Clacu01g1302 766 Pfam Subtilase family 146 584 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Clacu01g1302 766 ProSiteProfiles Serine proteases, subtilase domain profile. 116 612 - -
Clacu01g1302 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Clacu01g1302 766 SUPERFAMILY Subtilisin-like 7 670 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu01g1302 766 Gene3D - 629 763 - -
Clacu01g1302 766 Pfam Fibronectin type-III domain 664 760 IPR041469 -
Clacu01g1302 766 Gene3D Peptidase S8/S53 domain 147 625 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu01g1302 766 Pfam Peptidase inhibitor I9 32 112 IPR010259 -
Clacu01g1302 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 112 IPR037045 -
Clacu01g1302 766 FunFam Subtilisin-like protease SBT5.3 21 112 - -
Clacu01g1302 766 Gene3D - 340 476 - -
Clacu01g1302 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 758 IPR045051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu01g1302 Clacu-Chr1:23399807 Clacu07g0813 Clacu-Chr7:20617322 2.30E-146 dispersed
Clacu01g1302 Clacu-Chr1:23399807 Clacu09g0110 Clacu-Chr9:1017185 1.60E-118 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu01g1302 - - - 0.0