Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu01g1466 ATGGCGCTCTCTCTATCCCTACAACTCATCCGTTTCCCTCCTCAACCATTATCCTCATCCTCTCAACATCTTCTCATCTCTGACCTCGCCTCCGTCTCGCGCTTCTTCCGATCTCCATGTCTTTCCTCTTTGGCTCCGTCGCGGAGCTGCACGATGAAGTTATCTTCCAGAACCAAGTGTTTCTCCATGTCCACCGAGGAGGAGCAGTGGAGCGAATCGGAAGCGTTGGTGTCCGATGTGGACGGAGGGGGAGATCTTGAGGATGATATTGATATTGGTGTTCAGGAAGACAGCTCTGTGGCCACTGCTGCTTCTGCGCAGAAAAATTCTGCCTCGTCGCCGAGTGATTATCTGTCGCTTGCGATCCGAGAGCAGGTTTATGAGGTGTTAGAGGTTAAAGATGATGGAACCGTATCTACCAGGAAGGTTAACAGACGGCAACTATTGAAGTCAAGTGGGCTTCGTCCACGTGATATCCGAAGTGTTGATCCATCTTTATTTTTGACAAACTCAATGCCAACATTACTGGTCCGTGAACATGCTATTCTGCTTAATCTGGGATCATTGAGAGCAATAGCTATGCAGGATTGTGTCCTCATATTCGATTATAACCGTCCAGGAGGACAAGCTTTTATTGAATCATTGTTGCCTCGATTGAACCCAAAAAACATGAATGGAGTGCCAGCAATGCCATTTGAACTTGAGGTTGTTGAAGCTGCATTGCTTTCACGAACTCAGCGTTTGGAGCAGCGACTAATGAAAGTAGAACCTCGTGTTCAAGCTCTGCTTGAGGTATTGCCCAACAAATTAACTGCAGATGTGTTGGAACAACTTCGTATTAGCAAGCAGACATTGGTTGAATTAGGGTCCAGGGCAGGGGCTCTTAGACAAATGCTTCTTGATCTTCTGGAGGATCCGCAAGAAATACGACGCATCTGTATTATGGGAAGAAATTGCACGCTTAATAAAAGAAATGATGATGTGGAGTGCTCTCTTCCTTTGGATAAGCAGATTGCGGATGAAGAGGAAGAAGAAATAGAAATGCTGTTGGAAAATTATCTCCAGAGATGCGAATCTTGTCATGGTCAGGCTGAAAGGCTTCTGGATTCAGCAAAAGAAATGGAAGATTCAATTGCCGTAAATTTGAGCTCGCGGCGACTAGAGGTTAGCAGAGTGGAGTTGCTTCTCCAAGTTGGGACATTTTGTGTGGCAGTTGGTGCTTTAGTTGCAGGAATATTCGGCATGAACTTACGATCATACCTTGAAGAACACGTGTTTGATGCACTTGTCATGATGCATGCAGTTTGCCTTCTGGTTAACAACAGCTGGGATAATTGTTGGGGCTGTTGTGGCATTCTTTCTCATGTATTCATACCTCAGAGACAGGAGAATCCTGTAGCTAAGTACTTGTTCAGGTCATTCAACACTCAATCTTGGAGGGGCTGCTATATCCCAGTGATGAGGATGCAAATTGTGAAGGCTGCATATATTATTAGGCCATGCGCCAATATTGGCACAATCACTCAGTTTGGTTTATGA 1539 45.35 MALSLSLQLIRFPPQPLSSSSQHLLISDLASVSRFFRSPCLSSLAPSRSCTMKLSSRTKCFSMSTEEEQWSESEALVSDVDGGGDLEDDIDIGVQEDSSVATAASAQKNSASSPSDYLSLAIREQVYEVLEVKDDGTVSTRKVNRRQLLKSSGLRPRDIRSVDPSLFLTNSMPTLLVREHAILLNLGSLRAIAMQDCVLIFDYNRPGGQAFIESLLPRLNPKNMNGVPAMPFELEVVEAALLSRTQRLEQRLMKVEPRVQALLEVLPNKLTADVLEQLRISKQTLVELGSRAGALRQMLLDLLEDPQEIRRICIMGRNCTLNKRNDDVECSLPLDKQIADEEEEEIEMLLENYLQRCESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLRSYLEEHVFDALVMMHAVCLLVNNSWDNCWGCCGILSHVFIPQRQENPVAKYLFRSFNTQSWRGCYIPVMRMQIVKAAYIIRPCANIGTITQFGL 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 26734997 26744171 - ClG42_01g0146600.10 Clacu01g1466 240850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu01g1466 512 FunFam Magnesium transporter MRS2-11, chloroplastic 122 203 - -
Clacu01g1466 512 Gene3D Magnesium transport protein CorA, transmembrane region 206 387 - -
Clacu01g1466 512 FunFam Magnesium transporter MRS2-11, chloroplastic 205 387 - -
Clacu01g1466 512 Pfam Magnesium transporter MRS2-like 132 386 - -
Clacu01g1466 512 Coils Coil 336 356 - -
Clacu01g1466 512 Gene3D - 119 203 - -
Clacu01g1466 512 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 102 436 IPR039204 GO:0009941(PANTHER)|GO:0015095(PANTHER)|GO:0015693(PANTHER)
Clacu01g1466 512 CDD Mrs2_Mfm1p-like 129 424 IPR039204 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu01g1466 K16075 - csv:101219314 698.738