Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu01g1669 | ATGGCGTTTGATTTCCACATTCTTCTTCCAATTTTTCTCGTCTCATTACCCTTTCTTTTCATCCTTGTTTCCCTCTTTCTCAAATGGAATCCATATGGACTTCCTTGGAATTGGCCCATTTTAGGAATGATTCCCACCGTAATCCTCCACATCCACCGAATCCACGACCGTATAACCGAAATCTTACAAGTAACTTCTTGCACTTTCTACTTCAAAGGCATTTGGTTCACCAACACCGGCTTCTTAATGACCGTAGATCCTGCCAACATTCACCACATTATGAGCACAAATTTCCAAAATTACCCAAAAGGGCCTGAATTCAAGTACATTTTCGATGTTTTAGGAGATGGAATTTTCAATTCCGATTTCGATTCATGGAAAAACCAACGTAAAATTGCTCAATCTTTGATTGTTCATGAGAAATTTCTTGACTTTATGGCTGGAGCTGCCAAGGAGAAAGTGGAGAATGGGTTGGTGCCAATTCTTGAGTTTTTTTGTGAAAGTAAAAGTTCTGTTGATTTGAAAGATTTGTTTTTGAGATTGGCTTTTGATTCTACTTGTATGATGGTAACTGGGTTTGATCTTAATAGTTTGTCTCTTGAATTCCCTGAAATTCCATTCTCCAAAGCTATGGATGATGTTCAAGAAGTGCTTTTTCTTCGCCATTTGTATCCTAAATTTTATTGGGAGTTGCTTAAGAAACTTGAGATTGGAGAAGCTAAGAGAATGAAGAAGGCTTGTGATATCATTGATCAAGTTATTGCTAACTTGATGGCTGTGAAAAGAGAGCGTTCACAACGAGATCGAGAGTTGAAAGAAGAACAACAAGACCGCGGTGCTGATTTGATCACATGGTATATGGTGAATGAACATGATGAGATCGACTGTAACGACAAGTTCTTGAGAGATACAGTCTTAAACTTCATGATTGCTGGTCGCGATGCTTTGAGTGTAACTCTCTCGTGGCTCTTCTTTATCCTCTCGAAAAATCCTATCATAGCAGCAAAGATTCGAGAAGAGCTGAAAGGCATAACAACAGTTCCACAAAATGAATTAGAATCTCAAAACCAACGACAACAAAAACCAAGAGTATTCACCAATGAAGAGCTCAACAACTTGGTTTACTTGCATGGAGCCTTGTGTGAAACCCTTCGTCTCTATCCTCCGATTGCATTTGAGCACAAATCTCCGGCGGAACCCGACACGCTTCCGAGTGGCCACCATGTGAAACCTGGTACAAGGATCCTCTTCTCATTGTATGCATTGGGAAGAATGAAGAGTGTTTGGGGACAAGATTGCGAAGAATTCAAACCAGAGAGATGGATTTCTGAAAAAGGAACGATTAAAAGAGAGCCATCTTATAAGTTCTTTAGTTTCAATGCAGGGCCAAGGACTTGCTTGGGAAAAGGAGTGGCATTTTCCCAATTGAAGATTGTTTCAGCTGCCATTATCTATAACTATGACATTGAAGCTGTTGAAGACATCAACGTTGTTGCTCCAGCTGCTTCTGTGATACTTCACATGAAGAGTGGATTTAAGGTTAAAGTTTCTAAGAGATAA | 1560 | 39.68 | MAFDFHILLPIFLVSLPFLFILVSLFLKWNPYGLPWNWPILGMIPTVILHIHRIHDRITEILQVTSCTFYFKGIWFTNTGFLMTVDPANIHHIMSTNFQNYPKGPEFKYIFDVLGDGIFNSDFDSWKNQRKIAQSLIVHEKFLDFMAGAAKEKVENGLVPILEFFCESKSSVDLKDLFLRLAFDSTCMMVTGFDLNSLSLEFPEIPFSKAMDDVQEVLFLRHLYPKFYWELLKKLEIGEAKRMKKACDIIDQVIANLMAVKRERSQRDRELKEEQQDRGADLITWYMVNEHDEIDCNDKFLRDTVLNFMIAGRDALSVTLSWLFFILSKNPIIAAKIREELKGITTVPQNELESQNQRQQKPRVFTNEELNNLVYLHGALCETLRLYPPIAFEHKSPAEPDTLPSGHHVKPGTRILFSLYALGRMKSVWGQDCEEFKPERWISEKGTIKREPSYKFFSFNAGPRTCLGKGVAFSQLKIVSAAIIYNYDIEAVEDINVVAPAASVILHMKSGFKVKVSKR | 519 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 28802984 | 28805314 | + | ClG42_01g0166900.10 | Clacu01g1669 | 241053 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu01g1669 | 519 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 459 | 468 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Clacu01g1669 | 519 | PANTHER | CYTOCHROME P450 | 22 | 512 | - | - | |
| Clacu01g1669 | 519 | Gene3D | Cytochrome P450 | 23 | 519 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g1669 | 519 | SUPERFAMILY | Cytochrome P450 | 26 | 519 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g1669 | 519 | Coils | Coil | 257 | 277 | - | - | |
| Clacu01g1669 | 519 | PRINTS | E-class P450 group I signature | 456 | 466 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g1669 | 519 | PRINTS | E-class P450 group I signature | 300 | 317 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g1669 | 519 | PRINTS | E-class P450 group I signature | 320 | 346 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g1669 | 519 | PRINTS | E-class P450 group I signature | 466 | 489 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g1669 | 519 | CDD | CYP86A | 69 | 512 | - | - | |
| Clacu01g1669 | 519 | PRINTS | P450 superfamily signature | 311 | 328 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g1669 | 519 | PRINTS | P450 superfamily signature | 457 | 466 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g1669 | 519 | PRINTS | P450 superfamily signature | 466 | 477 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g1669 | 519 | PRINTS | P450 superfamily signature | 378 | 389 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu01g1669 | 519 | Pfam | Cytochrome P450 | 36 | 497 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu01g1669 | Clacu-Chr1:28802984 | Clacu01g1671 | Clacu-Chr1:28842713 | 4.00E-174 | dispersed | |
| Clacu01g1669 | Clacu-Chr1:28802984 | Clacu01g1670 | Clacu-Chr1:28817393 | 9.90E-157 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu01g1669 | - | - | - | 0.0 |