Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu01g1674 | ATGAAGCTCGAGATGAATGGCGGATATTTTCGATTGAAGAGACATAAGTTAGTTTACTTCCATGGAACTTTGTGTGAAGCTCTTAGACTATATCCTCCAATCCCAATCAATCACAAGGTGGTTGTACAACATGATATCCTCCCAAGTGGTCATCGCATAAATCTCAAAATGAAGATATTGTTGTCTATATATGCATTGGGAAGAATGAGTGTTGTGTGGGGAAAAGATTGCATGGAGTTCAAGCCAGAGAGATGGATTTCAGAAAAGGGAAAGATCAAACATGTGCCATCTTACAAATTCTTGGCCTTCAATCCTGGGCCAAGAACTTGTTTGGGAAAACAAGTGGCTTTCACTGAGTTGAAAATCGTTGCAGATGCCATTATTCATAACTACAAGATTATTCAACAAAAAGGACACCAAGTTGTTCCAAAGGCTTCCGTTGTTCTTCATATGAAGCATGGTTTCAAGGCCAGGATTATAAGGAGATGGACTTGA | 495 | 39.39 | MKLEMNGGYFRLKRHKLVYFHGTLCEALRLYPPIPINHKVVVQHDILPSGHRINLKMKILLSIYALGRMSVVWGKDCMEFKPERWISEKGKIKHVPSYKFLAFNPGPRTCLGKQVAFTELKIVADAIIHNYKIIQQKGHQVVPKASVVLHMKHGFKARIIRRWT | 164 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 28868300 | 28868794 | + | ClG42_01g0167400.10 | Clacu01g1674 | 241058 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu01g1674 | 164 | Pfam | Cytochrome P450 | 14 | 145 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Clacu01g1674 | 164 | PRINTS | E-class P450 group I signature | 110 | 133 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Clacu01g1674 | 164 | PRINTS | E-class P450 group I signature | 100 | 110 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Clacu01g1674 | 164 | PRINTS | E-class P450 group I signature | 21 | 39 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Clacu01g1674 | 164 | PANTHER | CYTOCHROME P450 | 15 | 155 | - | - | |
Clacu01g1674 | 164 | SUPERFAMILY | Cytochrome P450 | 14 | 162 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Clacu01g1674 | 164 | Gene3D | Cytochrome P450 | 11 | 163 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Clacu01g1674 | 164 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 103 | 112 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu01g1674 | Clacu-Chr1:28868300 | Clacu09g0450 | Clacu-Chr9:3917298 | 1.60E-39 | dispersed | |
Clacu01g1674 | Clacu-Chr1:28868300 | Clacu01g1675 | Clacu-Chr1:28879202 | 2.30E-67 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu01g1674 | - | - | - | 0.0 |