Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu01g1674 ATGAAGCTCGAGATGAATGGCGGATATTTTCGATTGAAGAGACATAAGTTAGTTTACTTCCATGGAACTTTGTGTGAAGCTCTTAGACTATATCCTCCAATCCCAATCAATCACAAGGTGGTTGTACAACATGATATCCTCCCAAGTGGTCATCGCATAAATCTCAAAATGAAGATATTGTTGTCTATATATGCATTGGGAAGAATGAGTGTTGTGTGGGGAAAAGATTGCATGGAGTTCAAGCCAGAGAGATGGATTTCAGAAAAGGGAAAGATCAAACATGTGCCATCTTACAAATTCTTGGCCTTCAATCCTGGGCCAAGAACTTGTTTGGGAAAACAAGTGGCTTTCACTGAGTTGAAAATCGTTGCAGATGCCATTATTCATAACTACAAGATTATTCAACAAAAAGGACACCAAGTTGTTCCAAAGGCTTCCGTTGTTCTTCATATGAAGCATGGTTTCAAGGCCAGGATTATAAGGAGATGGACTTGA 495 39.39 MKLEMNGGYFRLKRHKLVYFHGTLCEALRLYPPIPINHKVVVQHDILPSGHRINLKMKILLSIYALGRMSVVWGKDCMEFKPERWISEKGKIKHVPSYKFLAFNPGPRTCLGKQVAFTELKIVADAIIHNYKIIQQKGHQVVPKASVVLHMKHGFKARIIRRWT 164
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 28868300 28868794 + ClG42_01g0167400.10 Clacu01g1674 241058
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Clacu01g1674 164 Pfam Cytochrome P450 14 145 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g1674 164 PRINTS E-class P450 group I signature 110 133 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g1674 164 PRINTS E-class P450 group I signature 100 110 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g1674 164 PRINTS E-class P450 group I signature 21 39 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g1674 164 PANTHER CYTOCHROME P450 15 155 - -
Clacu01g1674 164 SUPERFAMILY Cytochrome P450 14 162 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g1674 164 Gene3D Cytochrome P450 11 163 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu01g1674 164 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 103 112 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu01g1674 Clacu-Chr1:28868300 Clacu09g0450 Clacu-Chr9:3917298 1.60E-39 dispersed
Clacu01g1674 Clacu-Chr1:28868300 Clacu01g1675 Clacu-Chr1:28879202 2.30E-67 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu01g1674 - - - 0.0