Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu01g1718 ATGGCCGATTTCCAGACCTCGACTCAACGGGCCAAATGGATCTTGTCTCCTCAGGAGCTGGTTTACAGGTACAAAGCTGCTAACCAGAGAGCGATCGAAGCTCTGGAGAAGTTTGGAGCAACACTAATGGAAGTAGATGCTGACGGATCATTGTCATATCCGGACCCTCAGATAAATTCAAAAGATAATACTGACAAACATTCTCGCTCCAAATCGTTGAGTATTGAAGAAGAGCAATTTATGCGAGTATTTTACGAAAACAAACTTCAAGAAGTATGCAACAACTTTCATTTTCCTCATAAAATCCAGGCAACAGCTCTAATATATTTTAAAAGATTCTACCTACAATGGTCCGTGATGCAGCATAATCCAAAAAATGTGATGTTAACCTGCATTTATGCAGCTTGTAAGATAGAAGAAAATCATGTCTCGGCTGAGGAGCTTGGTAAGGGGATTTCACAGGATCATCAAATTATTCTCAATTATGAGATGATAGTTTATCAGAGTCTGGAATTTGATCTTATTGTTTATGCACCTTACCGATCAGTTGAAGGCTATGTAAATGATATCGAGGAACTCTTCAATGAGAATGTTGAAATGCTTCAAATGCTAAAGCAAACAGCATCATTAGAGGTTGATAAAATTATGTTAACAGATGCCCCACTTCTCTTCCCCCCTGGGCAGTTGGCACTGGCTGCATTGCGCAGATCAAATGAAGTTCATGGAGTTATTGACTTTGATAGCTACCTGGATAGTATCCTCTCTCGCCAGAATTCTGCACATACAATTTCCGAGCTCTACGAGCATATAAATTCAATTGAATCATTGGTTAATAGATATACATTCCCTTCAGAAAAGGATTTAAAGCACATCAACCGAAAACTAAAATCTTGCTGGGGGCTGGGCTCCAATGACGAGTATTTTATTCAATCATGCGATACCTTAAGAATTAGTCTACCTCTTCCTTAG 969 39.32 MADFQTSTQRAKWILSPQELVYRYKAANQRAIEALEKFGATLMEVDADGSLSYPDPQINSKDNTDKHSRSKSLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQSLEFDLIVYAPYRSVEGYVNDIEELFNENVEMLQMLKQTASLEVDKIMLTDAPLLFPPGQLALAALRRSNEVHGVIDFDSYLDSILSRQNSAHTISELYEHINSIESLVNRYTFPSEKDLKHINRKLKSCWGLGSNDEYFIQSCDTLRISLPLP 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 29359891 29369121 + ClG42_01g0171800.10 Clacu01g1718 241102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu01g1718 322 PANTHER CYCLIN 9 299 IPR043198 GO:0000079(PANTHER)|GO:0005634(PANTHER)|GO:0006357(InterPro)|GO:0006357(PANTHER)|GO:0016538(PANTHER)|GO:0016538(InterPro)|GO:0070816(PANTHER)|GO:0070985(PANTHER)
Clacu01g1718 322 SMART cyclin_7 87 168 IPR013763 -
Clacu01g1718 322 SUPERFAMILY Cyclin-like 66 176 IPR036915 -
Clacu01g1718 322 Gene3D - 177 279 - -
Clacu01g1718 322 CDD CYCLIN_AcCycH_rpt2 177 298 - -
Clacu01g1718 322 Pfam Cyclin C-terminal domain 179 277 IPR031658 -
Clacu01g1718 322 SUPERFAMILY Cyclin-like 179 300 IPR036915 -
Clacu01g1718 322 FunFam Cyclin h 177 279 - -
Clacu01g1718 322 FunFam cyclin-H1-1 63 175 - -
Clacu01g1718 322 CDD CYCLIN_AcCycH_rpt1 3 174 - -
Clacu01g1718 322 Gene3D - 63 175 - -
Clacu01g1718 322 Pfam Cyclin, N-terminal domain 74 174 IPR006671 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu01g1718 K06634 - csv:101220754 585.104