Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu01g2409 ATGGAGTCCCAGTTGCTCTCACGCTCCACTTCCTTCGCCGGCGGCATTCCCACTCTCCGCAAGTTGCACAGAGACACCATCACTAACAACAACCATGTCGCCTTCGTCCACACCAGGCCCATCGCCGAGGGAGCCAACTTGATCTGGGGAAGACAACTCCGCCCCTCTTTACTGCTCGATACGCCGCATCTACTCTCCGCTAAACGGGAGACGATTCGCCCTACCTTTGCGGCGGCCTCCTCTTCTTCCGCCGGAGGTAGCGATTCCGCCGGGGAGGCGAAGGTTGCTCCGGTGGGGTTCTTAGAGAAGTATCCGGCGTTGGTCACCGGATTCTTCTTCTTTATGTGGTACTTCCTGAACGTGATTTTCAATATCCTCAACAAGAAGATATATAATTACTTCCCCTATCCATATTTTGTGTCGGTGATCCATTTATTGGTTGGGGTGGTGTACTGTTTGATAAGCTGGGCTGTGGGTCTTCCTAAGCGAGCACCTATTGATTCAACCCTCCTGAAGTTGCTGATCCCTGTAGCTTTCTGTCATGCACTTGGCCATGTCACTAGCAATGTCTCATTCGCGGCTGTTGCTGTCTCATTCACTCATACAATCAAAGCTCTGGAACCGTTCTTTAACGCTGCCGCTTCTCAATTCATTTTGGGGCAACCCATTCCCATTACCTTGTGGCTTTCATTGGCTCCCGTTGTCATTGGTGTGTCAATGGCATCCTTGACTGAGCTTTCATTTAACTGGACTGGTTTCATTAGTGCTATGATTTCCAATATCTCCTTTACCTACAGAAGTATTTATTCAAAGAAAGCCATGACTGACATGGACAGCACCAACGTTTATGCCTACATTTCGATTATTGCTCTCCTTTTCTGCATTCCACCTGCTGTAATTGTGGAAGGGCCTCAACTGCTGAAGTTTGGTTTCAATGATGCCATAGCCAAAGTTGGTCTAACCAAATTCGTTTCAGATCTCTTCTGGGTAGGGATGTTTTATCATCTTTACAATCAGTTAGCAACCAACACCTTAGAGAGGGTGGCACCACTTACCCATGCAGTTGGAAATGTGCTGAAACGTGTATTTGTGATTGGATTCTCCATCATTATCTTCGGTAACAAAATCTCTACACAGACTGGTATTGGAACCGGCATTGCAATTGCAGGAGTAGCACTTTACTCTTACATCAAGGCTAAGATGGAAGAAGAGAAACGATTTTATTGTTTGGACAGCGAACAAAGGTGGCTTGAAGAAGCATGGGATGGAGGTGACGGGAAGCATGGAATTGAGAGGAGGATTTGGATCGTCCATGAGGTCACAAAAGAAGGAATGAGGCTGACTCATAAATCCAATACAAACATGAAGGTGTCCCAATGGGTCAAGCCACGAGATTTCCTTGGGATTACTACTTAG 1416 46.96 MESQLLSRSTSFAGGIPTLRKLHRDTITNNNHVAFVHTRPIAEGANLIWGRQLRPSLLLDTPHLLSAKRETIRPTFAAASSSSAGGSDSAGEAKVAPVGFLEKYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLLVGVVYCLISWAVGLPKRAPIDSTLLKLLIPVAFCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQPIPITLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNVYAYISIIALLFCIPPAVIVEGPQLLKFGFNDAIAKVGLTKFVSDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIIIFGNKISTQTGIGTGIAIAGVALYSYIKAKMEEEKRFYCLDSEQRWLEEAWDGGDGKHGIERRIWIVHEVTKEGMRLTHKSNTNMKVSQWVKPRDFLGITT 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 34691589 34696571 - ClG42_01g0240900.10 Clacu01g2409 241793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu01g2409 471 SUPERFAMILY Multidrug resistance efflux transporter EmrE 151 244 - -
Clacu01g2409 471 Pfam Triose-phosphate Transporter family 108 395 IPR004853 -
Clacu01g2409 471 PANTHER SOLUTE CARRIER FAMILY 35 100 399 IPR050186 GO:0005794(PANTHER)|GO:0015297(PANTHER)
Clacu01g2409 471 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 107 405 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Clacu01g2409 471 SUPERFAMILY Multidrug resistance efflux transporter EmrE 324 396 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu01g2409 Clacu-Chr1:34691589 Clacu05g2572 Clacu-Chr5:33644545 1.50E-148 dispersed
Clacu01g2409 Clacu-Chr1:34691589 Clacu01g1369 Clacu-Chr1:25023010 3.20E-53 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu01g2409 K15283 - csv:101220728 743.806