Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu01g2430 ATGAAAGCCGACCCATTTCTCGATCAAAGAGTTCGTTCCCATGTCGCTGATATAAGCACTTCATTTGCGAAGATGGGTTCTGGTCGTTGGTTTAAGGCAGTAATTCGCTTAAAGAAAGTGAAAACCTGCAGTTCAAAACAAACTAAGGAGAAATTGGATGATTTGCAAAAAGATTCCCCAAGGTTTAAAAATGGTGGCACCAATGGGAATAGTAAGTCTCTTGGGATGCCAATTGAAGATGTAGCGGCAGTTCGGATTCAGACAGCATACCGAGCATATCGTGCCAGGAAAAATTTACGTCGCTTGAAAGGGGCCTTCAGACTGCAGAATCTGACTCAAGGCAATTCCGTTAGAAAGCATGCTACATCTACATTAGGCTATCTTCATTCATGGAGCAATATACAGGCTCAAATTAGGGCTCGTCGACTTTGTATGGTGACAGAAGGACGACTAAGACAAAAAAGATTAGAAAATCAACGAAAACTTGAGGCTAAGCTTCATCATATAGAGGTGGAGTGGTGTGGGGGTGCAGACTCCATGGATGGGATTCTTTCGAGGATACATGAGAGAGAAGAAGCGGCGGTTAAGCGCGAGCGGGCTATGGCATATGCATTCTCACATCAGTGGAGAGCAAACTCCAATGAGATGTATGGGTTGGGTAAAGATGAACTTGGTAAAGCTGATTGGGGTTGGAGCTGGAAAGAACGATGGATAGCTGCTCGTCCGTGGGAAAGCCGTGTACCATCTCAGTTCGATAGTCCAAAGAAATCTACAATTAGGCAATCAAGCAAAGTCAGTAAGAGAAACTCTCCATCCCCTAAAGCACGAGTTTCAATTAAACCTCCTTCCCCAAATGTGAAATCAACTTCAAAGGCTCGAAGGTTGTCTTATCCAGCAACCGAGAAAACCGAAAAACTGGCTACAGAAGAAAAAGGCGTCAAAGAAAGCGTTAAAAATGAAGGGAACACTAAGAAAGAAGAAACAGCATCCTAA 993 43.61 MKADPFLDQRVRSHVADISTSFAKMGSGRWFKAVIRLKKVKTCSSKQTKEKLDDLQKDSPRFKNGGTNGNSKSLGMPIEDVAAVRIQTAYRAYRARKNLRRLKGAFRLQNLTQGNSVRKHATSTLGYLHSWSNIQAQIRARRLCMVTEGRLRQKRLENQRKLEAKLHHIEVEWCGGADSMDGILSRIHEREEAAVKRERAMAYAFSHQWRANSNEMYGLGKDELGKADWGWSWKERWIAARPWESRVPSQFDSPKKSTIRQSSKVSKRNSPSPKARVSIKPPSPNVKSTSKARRLSYPATEKTEKLATEEKGVKESVKNEGNTKKEETAS 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 34862051 34867650 + ClG42_01g0243000.10 Clacu01g2430 241814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu01g2430 330 MobiDBLite consensus disorder prediction 246 330 - -
Clacu01g2430 330 MobiDBLite consensus disorder prediction 46 73 - -
Clacu01g2430 330 MobiDBLite consensus disorder prediction 282 296 - -
Clacu01g2430 330 MobiDBLite consensus disorder prediction 250 273 - -
Clacu01g2430 330 MobiDBLite consensus disorder prediction 297 330 - -
Clacu01g2430 330 ProSiteProfiles IQ motif profile. 79 107 - -
Clacu01g2430 330 MobiDBLite consensus disorder prediction 46 60 - -
Clacu01g2430 330 PANTHER IQ-DOMAIN 5-RELATED 73 291 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu01g2430 Clacu-Chr1:34862051 Clacu07g0989 Clacu-Chr7:24327790 1.80E-55 dispersed
Clacu01g2430 Clacu-Chr1:34862051 Clacu09g2069 Clacu-Chr9:35494288 1.10E-33 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu01g2430 - - - 0.0