Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu01g2600 | ATGGAAGCGGTGGCAGACACCAAAGCAAAGATGTTGCTAACGCTAACCACGTGGAAATCAAAGCGAGTAAAAATCAAGCTCCCCAAAGAAGCAAAGGAAGAAAATCACAAAACGATCAATAACAACAACGAGGATGAACGAGAGGAGAATTTGGAAGATGAGGGAGGCTCGACACAAATAAAACAACGAGAAGTTATTTATGGATCTCATCTAGTACAAGGCAAAATGAATCATGGAATGGAAGACTATATCGTTACCGAAGAACGACATGTCGACAACCACATGCTGGGACTATTTGCAATATTTGATGGCCACTCCGGTCGCGATGTCACAGAGTACTTGCAGAGCCATCTGTTTGATAACATCTTAAGCCAGTCTGATTTCTGGGAAGACCCTGAAGGAGCAATCAGGAGAGCATATAAAGCAACAGATGAGGAGATTTTAGCTAAAAAAGTGGGAAAGAGAGGAGGTTCAACAGCAGTTACAGCTATACTAATAGATGGGCAGAAGCTAATCGTCGCACACGTAGGCGACTCACGGGCGGTGATATGCAGGAATGGCTCAGCAAAACCGATTACGGTCGATCACGAACCAGAGGAGGAGAAGGAGCTTGTTGAGAGCCGAGGTGGATTTGTTGTACAAATGCCAGGAAGTGTGCCACGGGTGGATGGTCAGCTAGCAATGTCAAGGGCATTTGGTGATGCAAGGCTGAAAGAACACATTACTTCAGAACCAGATATCAGGATCCTCACAATTGACAATGAGACTGAGTTCACCATTTTGGCCAGTGATGGCCTCTGGAAGGTAATGTCAAACCAGGAGGCTTGTGATTGCATCAGAGAAATGGGAATGGATCCTCAAAAGGCTTCAGAGGAATTGATTAAAGAGGCATTGTCTAAAATGAGCTACGATGACATTTCCTGCGTTGTAGTTACCTTCCACTGA | 945 | 44.87 | MEAVADTKAKMLLTLTTWKSKRVKIKLPKEAKEENHKTINNNNEDEREENLEDEGGSTQIKQREVIYGSHLVQGKMNHGMEDYIVTEERHVDNHMLGLFAIFDGHSGRDVTEYLQSHLFDNILSQSDFWEDPEGAIRRAYKATDEEILAKKVGKRGGSTAVTAILIDGQKLIVAHVGDSRAVICRNGSAKPITVDHEPEEEKELVESRGGFVVQMPGSVPRVDGQLAMSRAFGDARLKEHITSEPDIRILTIDNETEFTILASDGLWKVMSNQEACDCIREMGMDPQKASEELIKEALSKMSYDDISCVVVTFH | 314 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 36262009 | 36264472 | - | ClG42_01g0260000.10 | Clacu01g2600 | 241984 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu01g2600 | 314 | FunFam | Probable protein phosphatase 2C 39 | 56 | 314 | - | - | |
Clacu01g2600 | 314 | Pfam | Protein phosphatase 2C | 77 | 305 | IPR001932 | - | |
Clacu01g2600 | 314 | MobiDBLite | consensus disorder prediction | 29 | 45 | - | - | |
Clacu01g2600 | 314 | PANTHER | PROTEIN PHOSPHATASE | 45 | 311 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Clacu01g2600 | 314 | SUPERFAMILY | PP2C-like | 65 | 314 | IPR036457 | - | |
Clacu01g2600 | 314 | ProSiteProfiles | PPM-type phosphatase domain profile. | 66 | 313 | IPR001932 | - | |
Clacu01g2600 | 314 | Gene3D | - | 33 | 314 | IPR036457 | - | |
Clacu01g2600 | 314 | SMART | PP2C_4 | 62 | 311 | IPR001932 | - | |
Clacu01g2600 | 314 | Coils | Coil | 29 | 49 | - | - | |
Clacu01g2600 | 314 | MobiDBLite | consensus disorder prediction | 29 | 58 | - | - | |
Clacu01g2600 | 314 | CDD | PP2Cc | 65 | 313 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu01g2600 | Clacu-Chr1:36262009 | Clacu11g1978 | Clacu-Chr11:30743185 | 5.20E-84 | dispersed | |
Clacu01g2600 | Clacu-Chr1:36262009 | Clacu07g0239 | Clacu-Chr7:2805238 | 3.60E-85 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu01g2600 | K14803 | - | csv:101211141 | 477.248 |