Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu02g0037 ATGACTGAAAATCTTGCGTCGCCGGTCGCAGCTTCTCGCTTGAAGCTTTACTCGTACTGGAGGAGCTCTTGTTCTCACCGTGTTCGAATTGCCCTAAACTTGAAAGGTCTAAATTTCGAGTACAAAGCTGTTAACCTACTGAAGGGAGAGCAATTCACTCCCGAGTATGAGAAGCTCAATCCTATTGGTTATGTACCCACTCTTGTGGATGGGGATGTTGTTATTGCCGACTCTTTTGCTATATTAATGTATTTGGAGGAGAAGTACCCTCAGCATCCTCTGTTGCCTCGTGATCTTAGTAAAAGAGCTATTAATTACCAGGCTGCAAACATCGTTTCTTCTAGCATACAGCCTCTTCAAAATCTAGCTGTTCTGAAGTACATTGAGGAAAAATCTGGTCCAGAAGAGAAACTTCGTTGGGTTCAACATCACATTGAAAAAGGTTTTACAGCACTCGAAAAGCTGCTGAAAGTTCATGCTGGGAAATATGCTACTGGAGACGAAATCTATCTGGCGGACTTGTTTTTGGCTCCCCAAATTCATGGCGCCATCAATAGATTCAGTGTTGACATGTCCAAATTTCCTCTTTTATGCAGGTTGAATGAGGAATACAACGCTATAGCAGCATTTCAAGATGCAGCGCCAGCAAACCAGCCTGATGCTACTCAAACCTCTACTTAA 681 43.02 MTENLASPVAASRLKLYSYWRSSCSHRVRIALNLKGLNFEYKAVNLLKGEQFTPEYEKLNPIGYVPTLVDGDVVIADSFAILMYLEEKYPQHPLLPRDLSKRAINYQAANIVSSSIQPLQNLAVLKYIEEKSGPEEKLRWVQHHIEKGFTALEKLLKVHAGKYATGDEIYLADLFLAPQIHGAINRFSVDMSKFPLLCRLNEEYNAIAAFQDAAPANQPDATQTST 226
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 435417 439890 + ClG42_02g0003700.10 Clacu02g0037 242105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu02g0037 226 FunFam Maleylacetoacetate isomerase 97 224 - -
Clacu02g0037 226 Pfam Glutathione S-transferase, N-terminal domain 13 86 IPR004045 -
Clacu02g0037 226 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 12 93 IPR004045 -
Clacu02g0037 226 SFLD Main (cytGST) 14 196 - -
Clacu02g0037 226 Gene3D Glutaredoxin 11 96 - -
Clacu02g0037 226 PANTHER MALEYLACETOACETATE ISOMERASE 12 221 - GO:0004364(PANTHER)|GO:0006559(PANTHER)|GO:0006749(PANTHER)|GO:0016034(PANTHER)
Clacu02g0037 226 SUPERFAMILY GST C-terminal domain-like 93 221 IPR036282 -
Clacu02g0037 226 SUPERFAMILY Thioredoxin-like 9 97 IPR036249 -
Clacu02g0037 226 CDD GST_N_Zeta 14 86 IPR034333 -
Clacu02g0037 226 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 98 223 IPR010987 -
Clacu02g0037 226 Pfam Glutathione S-transferase, C-terminal domain 126 206 IPR004046 -
Clacu02g0037 226 NCBIfam maleylacetoacetate isomerase 15 221 IPR005955 GO:0003824(InterPro)|GO:0005737(InterPro)|GO:0009072(InterPro)
Clacu02g0037 226 CDD GST_C_Zeta 101 218 IPR034330 -
Clacu02g0037 226 Gene3D - 97 224 - -
Clacu02g0037 226 SFLD Glutathione Transferase (cytosolic) 14 196 IPR040079 -
Clacu02g0037 226 FunFam Glutathione S-transferase Z1 12 96 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g0037 Clacu-Chr2:435417 Clacu05g0258 Clacu-Chr5:2244137 8.90E-70 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu02g0037 K01800 - csv:101213302 400.208