Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu02g0076 ATGTTTTTGCTCTCAAAGGCCGCATTCATCGCCGGAATGAACCATTATGTCTATATTTTTTATCGCCAACTCACCGCCACCATCTTCCTTTCTCCCTTTGCCTTCTTTTTTAGATGGAAAGACGCCCCACCCTTGACATTCTTTACTTTCTGCAACATTTTTGTGCTATCTTTGTTTGGGATAGCCATATGTTTAAATTTGTATGGAATTGCTCTTGCGTACACGTCAGCAACATTGGCTGCAGCAACTGCCAACTGTCTTCCCGTCATCACCTTCTTTGTCGCGCTTTTACTTAGGATGGAAGTGTTGAGGATGAAATCAATAGCAGGAATTGCAAAGGTAGCAGGAATAATATTGTGCATTGGTGGTGTTGGAATGTTGGCATTTTACAAAGGCCCTCAATTCAACTTGTTTAACAATCATCATCTCTTATCTATCCATCACCATTCTTCTAATTCTCTTACATTGCCCAAATCTTGGATGAAGGGTTGCCTTTTGATGCTAGCTTCCAATACCTTATGGAGCATTTGGATTGTTCTTCAGGGCATGATGACCGCAGTTACATTTTGTCTTCAAGCTTGGGTTATTGAGAAGAAAGGAGCAGTTTATGTAGCCATGTCTACACCTTTGGCTCTTATCATAACAATCTTCTTTTCTGCTATTTTTCTTGGAGAGAGTATCACTCTTGGAAGTAGTTTAGGAGGAATGTTGTTGGTGGGAGGGCTTTATTTTGTGCTATGGGGAAAGAGCAAAGAGCAAAAAATAAGTGAAGGATTGAAAGAAGGTAGCAAAGAATGCAACATGCAAGGGAATGAGATCACTAAGTTAGGAAATGAAACTCCAACTTCTTCAGTGGAAAATGTCTGA 867 40.25 MFLLSKAAFIAGMNHYVYIFYRQLTATIFLSPFAFFFRWKDAPPLTFFTFCNIFVLSLFGIAICLNLYGIALAYTSATLAAATANCLPVITFFVALLLRMEVLRMKSIAGIAKVAGIILCIGGVGMLAFYKGPQFNLFNNHHLLSIHHHSSNSLTLPKSWMKGCLLMLASNTLWSIWIVLQGMMTAVTFCLQAWVIEKKGAVYVAMSTPLALIITIFFSAIFLGESITLGSSLGGMLLVGGLYFVLWGKSKEQKISEGLKEGSKECNMQGNEITKLGNETPTSSVENV 288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 768196 775702 - ClG42_02g0007600.10 Clacu02g0076 242144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu02g0076 288 Pfam EamA-like transporter family 2 120 IPR000620 GO:0016020(InterPro)
Clacu02g0076 288 Pfam EamA-like transporter family 184 246 IPR000620 GO:0016020(InterPro)
Clacu02g0076 288 SUPERFAMILY Multidrug resistance efflux transporter EmrE 168 251 - -
Clacu02g0076 288 SUPERFAMILY Multidrug resistance efflux transporter EmrE 21 131 - -
Clacu02g0076 288 PANTHER WAT1-RELATED PROTEIN 184 261 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g0076 Clacu-Chr2:768196 Clacu08g0847 Clacu-Chr8:18509495 1.50E-42 dispersed
Clacu02g0076 Clacu-Chr2:768196 Clacu02g0077 Clacu-Chr2:779069 1.00E-134 tandem
Clacu01g1630 Clacu-Chr1:28398144 Clacu02g0076 Clacu-Chr2:768196 1.50E-55 wgd
Clacu02g0076 Clacu-Chr2:768196 Clacu07g0969 Clacu-Chr7:23999937 9.10E-27 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu02g0076 - - - 0.0