Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu02g0077 ATGAAATATATGAAGATCATGGATGAGAATAAAAGAGCTTTCATGGCTGTGATTCTGATTCAGACCATTTACGCCGGCATGTTTCTCCTCTCCAAGGCTGCGTTCGATGGCGGAATGAACAACTATATCTTCGTTTTCTATCGCCAAGCCATCGCCACCGTCTTCCTTTCTCCCATAGCCTTCTTTTTTCAATGGAAAGATGCCCCACCTTTGACATTCTTCACCTTCTGCAAAATTTTTATGCTCTCTTTATTTGGGATAGCCATATGTTTAAATCTTTATGGGATTGCTCTTGTGTACACGTCAGCAACATTGGCTGCAGCAACTACAAATTGTCTTCCTGTCATCACCTTCTTCGTCGCTCTCTTACTTAGGATGGAAGTGTTGAGGATGAAATCAATAGCAGGAATTGCAAAGCTAGCAGGAATAATATTGTGCATTGGTGGTGTTGGAATGTTGGCATTTTACAAAGGCCCTCAATTCAATTTGTTTAATAATCATCATCTCTTTTCTATCCATCACCATTCTTCTAATTCTCTTGCATTGCCCAAATCTTGGTTGAAGGGTTGCTTTTTGATGCTATCTGCCAATACCTTATGGGGTATTTGGATTGTTCTTCAGGCATTTGTATTGAAAAGCTATCCATCAAAGCTTCTGTTGACAAATCTTCAATGTTTATTAAGTTCATTTCAATCATTTGGAATTGCTATTGCAATGGAGAGAGACCCTCAGCAATGGAAACTTGGTTGGAATATTAGGCTTCTTTCAGTTGCATACTGTGGCATCGTGGTAACCGCGGTTACATATTGTCTTCAAGCTTGGGTTATTGAGAAGAAAGGACCAGTTTATTTAGCCATGTCTACACCTTTTGCCCTTATCATTACAACCTTCTTCTCTGCTGTTTTTCTTGGGGAGAGTATCACTCTTGGAAGTAGTTTAGGAGGAATGTTGTTGGTGGGAGGGCTTTATTTTGTGCTATGGGGAAAGAGCAAAGAGCAAAAAATAAGTGAAGGATTGAAAGAAGGTAGCAAAGAATGCAACATGCAAGGGAATGAGATCACTAAGTTAGGAAATGAAACTCCAACTTCTTCAGTGGAAAATGTCTGA 1107 39.66 MKYMKIMDENKRAFMAVILIQTIYAGMFLLSKAAFDGGMNNYIFVFYRQAIATVFLSPIAFFFQWKDAPPLTFFTFCKIFMLSLFGIAICLNLYGIALVYTSATLAAATTNCLPVITFFVALLLRMEVLRMKSIAGIAKLAGIILCIGGVGMLAFYKGPQFNLFNNHHLFSIHHHSSNSLALPKSWLKGCFLMLSANTLWGIWIVLQAFVLKSYPSKLLLTNLQCLLSSFQSFGIAIAMERDPQQWKLGWNIRLLSVAYCGIVVTAVTYCLQAWVIEKKGPVYLAMSTPFALIITTFFSAVFLGESITLGSSLGGMLLVGGLYFVLWGKSKEQKISEGLKEGSKECNMQGNEITKLGNETPTSSVENV 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 779069 786756 - ClG42_02g0007700.10 Clacu02g0077 242145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu02g0077 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 331 - -
Clacu02g0077 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
Clacu02g0077 368 PANTHER WAT1-RELATED PROTEIN 15 341 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Clacu02g0077 368 Pfam EamA-like transporter family 14 144 IPR000620 GO:0016020(InterPro)
Clacu02g0077 368 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu01g1634 Clacu-Chr1:28434093 Clacu02g0077 Clacu-Chr2:779069 2.30E-88 dispersed
Clacu01g1635 Clacu-Chr1:28454863 Clacu02g0077 Clacu-Chr2:779069 5.80E-87 dispersed
Clacu02g0077 Clacu-Chr2:779069 Clacu08g0847 Clacu-Chr8:18509495 4.30E-82 dispersed
Clacu02g0076 Clacu-Chr2:768196 Clacu02g0077 Clacu-Chr2:779069 1.00E-134 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu02g0077 - - - 0.0