Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu02g0093 | ATGGACCCAACTTTTGTTAAATCAAAAGACTCTACTTCTTACTGGGTTCTAACCCTTCCTTATTTTCTTGCTTTCGATAACTATGGCCTCTTCCATTGCTTTCTCCTCCTTCTTCTAGCTTTCCTCTCTCTCGCTCTTCTCACTTGGGCTTTCTCCCCCGCCGGCACTGCTTGGAAAAATGGAAGAAACCGTCGGGGTCCACTCCCCATTCCCGGCCCTCGCGGCCTTCCATTTCTCGGCAGTTTATTCACTCTCACCCACGGCTTACCCCATCGGACTCTCGCTGCTATAGCAGCCAGCCGTCGAAACTCTCATCTCATGGCTTTCTCTCTCGGCTCCACTCCTGTTGTGGTTGCTTCCCACCCTAACACCGCTAAGGAAATTCTAACCTCCCCCCACTTCGCGGACCGCCCGCTCAAGCAGTCCGCCAAGAGTTTAATGTTCGGTCGAGCCATAGGGTTCGCACCAAACGGAACCTACTGGCGTCTCTTAAGAAGAATTGCTTCTTCCCACCTCTTCTCTCCCAAGCGTATTACCGCCCACGAAGGCGTGCGGCAGCTCCATTGCGCTGCTCTGCTTCAAAGCATTCGCCTTGAACAAACCCTCCATGGAGCTGTTGGTTTGAGGAGCCATCTTCAAGCTGCTTCGTTGAAGAACGTGATGTGGAGTGTATTTGGGAAGCGGTTCGAGGAAGGGGATTTGGAATTGGAAATGGTTCGAGATTTGGTCCGTGAAGGGTTCGAGCTGTTGGGTGCGTTTAATTGGTCCGATTATCTCCCTTGGCTCACTTGGTTCTATGACCCGTTTCGTATTAACCAACGCTGCGCTCAACTCGTCCCCAAAGTTAATAAATTCGTACGAGGCGTAATTGATGAACACCGCCGTTGTAAAACCCTGTCGGACGATTCTGATTTTGTTGACGTTTTGCTTTCCCTTGATGGCGAAGAAAAACTCAACGAAGATGACATGGTCGCTGTTTTATGGGAAATGATTTTTAGGGGAACGGATACGACAGCGCTGCTGACAGAGTGGGTGATGGCGGAGTTAGTTTTGCACGGTGAAATACAAGAAGAGGTTGGGAGGGAAATCGAGAGCGTAGTGGGCGGTGACGGAAGGATTCTCACAGACGCTGACGTGGCGAAACTGCCTTACTTACAGGCGGTGGTGAAGGAGACTCTACGGCTACATCCACCGGGCCCACTTCTCTCGTGGGCCCGTCTTTCTTCGTCGGACGTCCAGCTCAGCAACGGCATGCTTATCCCCGAGAACACAACCGCCATGGTCAATATGTGGGCCATCACGCACGATCCCCACGTATGGGAAAATCCACACGTGTTCAACCCCGGCAGGTTTCTGACCGCTGACGTGGACGTCAGAGGCAGCGATCTCCGCCTTGCGCCGTTTGGGGCTGGGCGGAGGGTCTGCCCGGGAAAGAACCTCGGCCTTGTGACGGTCACACTATGGGTGGCTAAGTTGGTCCATCACTTTAAATGGGCCCCCGACCCGGCCCACCCGGTCGACCTTACCGAACTCCTCAAGCTCTCGTCTGAGATGAAAAATCCTCTACGTGCAGTAGCAGCGGAAAGACGTGGTCTTTAA | 1599 | 53.03 | MDPTFVKSKDSTSYWVLTLPYFLAFDNYGLFHCFLLLLLAFLSLALLTWAFSPAGTAWKNGRNRRGPLPIPGPRGLPFLGSLFTLTHGLPHRTLAAIAASRRNSHLMAFSLGSTPVVVASHPNTAKEILTSPHFADRPLKQSAKSLMFGRAIGFAPNGTYWRLLRRIASSHLFSPKRITAHEGVRQLHCAALLQSIRLEQTLHGAVGLRSHLQAASLKNVMWSVFGKRFEEGDLELEMVRDLVREGFELLGAFNWSDYLPWLTWFYDPFRINQRCAQLVPKVNKFVRGVIDEHRRCKTLSDDSDFVDVLLSLDGEEKLNEDDMVAVLWEMIFRGTDTTALLTEWVMAELVLHGEIQEEVGREIESVVGGDGRILTDADVAKLPYLQAVVKETLRLHPPGPLLSWARLSSSDVQLSNGMLIPENTTAMVNMWAITHDPHVWENPHVFNPGRFLTADVDVRGSDLRLAPFGAGRRVCPGKNLGLVTVTLWVAKLVHHFKWAPDPAHPVDLTELLKLSSEMKNPLRAVAAERRGL | 532 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 997910 | 999619 | - | ClG42_02g0009300.10 | Clacu02g0093 | 242161 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu02g0093 | 532 | Pfam | Cytochrome P450 | 71 | 506 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0093 | 532 | FunFam | Cytochrome P450 78A5 | 62 | 529 | - | - | |
| Clacu02g0093 | 532 | PRINTS | E-class P450 group I signature | 475 | 498 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0093 | 532 | PRINTS | E-class P450 group I signature | 215 | 233 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0093 | 532 | PRINTS | E-class P450 group I signature | 342 | 368 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0093 | 532 | PRINTS | E-class P450 group I signature | 465 | 475 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0093 | 532 | PRINTS | E-class P450 group I signature | 100 | 119 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0093 | 532 | PRINTS | E-class P450 group I signature | 322 | 339 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0093 | 532 | PRINTS | E-class P450 group I signature | 386 | 404 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0093 | 532 | PRINTS | E-class P450 group I signature | 429 | 453 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0093 | 532 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 468 | 477 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Clacu02g0093 | 532 | PANTHER | CYTOCHROME P450 78A7-RELATED | 7 | 525 | IPR051996 | - | |
| Clacu02g0093 | 532 | SUPERFAMILY | Cytochrome P450 | 70 | 529 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0093 | 532 | Gene3D | Cytochrome P450 | 60 | 529 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0093 | 532 | CDD | CYP78 | 102 | 522 | - | - | |
| Clacu02g0093 | 532 | PRINTS | P450 superfamily signature | 333 | 350 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0093 | 532 | PRINTS | P450 superfamily signature | 475 | 486 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0093 | 532 | PRINTS | P450 superfamily signature | 387 | 398 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0093 | 532 | PRINTS | P450 superfamily signature | 466 | 475 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu02g0093 | Clacu-Chr2:997910 | Clacu04g1225 | Clacu-Chr4:26417156 | 7.50E-136 | dispersed | |
| Clacu02g0093 | Clacu-Chr2:997910 | Clacu08g1206 | Clacu-Chr8:21978404 | 1.20E-136 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu02g0093 | K20619 | - | csv:101214099 | 904.82 |