Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu02g0132 ATGGGTTGGAAGAGATCTTCGAGGAACGGCAATTTGAGGATCTGGGTGCAGGTTTTAGTCGGATTCGTGATCTGCGCAGCCCAAGTTCTTTTCGGAATTACGAATCCAGGGGATTTTTCTGCTATTAGTAGCTTACATACCGCACTGGGACTTCCCAGTCTTCCTGGATGGGGCATCGGGCAAGACCCATGCGGAGACGCATGGCAGGGTGTTGTGTGTAATGATTCGAGCATCATTAAAATAATCATTAATGCTGCTAATTTGGGAGGTGAACTTGGTGACAACTTGGGATTGTTTTCTTCGATTCAAACAATTGATTTAAGCAACAATCATATAGGGGGAAGTATACCATCCAGTTTACCTGTTACCATGCAGAACTTTTTTCTTTCAGCTAATGAGTTCACGGGAAGTATTCCGAGTTCATTATCATCTTTGATTCAACTGACAGCGATGTCGTTGAATGATAACAAATTAAGTGGACAAATACCAGATTCCTTTGAAGCCATTTCTCAATTGGTCAATTTAGACTTGTCCAATAACAACTTGAGTGGGCCACTGCCTCCATCTGTAAGCAATTTATTGGCATTGACCACCCTGCATTTGCAGAACAATCAGCTGTCGGGGACCCTTGATGTTCTACAAGACCTTCCACTGAAAGACTTGAATATAGAGAACAACCTTTTTTCTGGACCCATACCTGAGAAGGTGCTGAGTATCCCTAATTTTAGAAAGGATGGAAATCCATTTAATTCTTCTGTTTCGCCGACATCTCCTCCTGTATCTCCTTCTCCACCATCAAAGCCAGCACCAGCACCGCCAGTTTCTGGAGCATCACCAGTTTCTGGAGCACCACCATCTTCTCAACAAAAACCTAAGAAACAGGCTGATGGACCATCGGCACCAGAGGAATCCAGTTCTGGAAAAAATAAGAAAAGCACTAAAAGGGTTGTTTTAATAACAATTGCAGTGGTTTTGTCATTCATAATTTTGGTCTTGGCATGTGTGCTCTTTATGCCAAGGTGCAGAAGAAGAAGAGTTGATAGTGTATCCAAGCGACATCAGATAGGTGCTTATAGAGGTGAGAGAGAGAATGCTGGAAATCAGGGAGCCATGCCCCATACAAATGATCAGATTCCTAAAGTTCCAAAAGAGCCAGTTGTAAGGCCGAAGCAGGAAACTCAAACAGAGGTTCAGAAGGTTCCAAAAGATCATGAAGAGAGAAAGAAAAACATGCCAAGAATGAGCGCTATTCCAAAGAAGGATCATCATGAAGTAGATATGAGCGCACTCGATGTCTATCTAATGCCTCCCCCTCCCCCACCACCTCCCCCTCCTCCTCCCCCTCCCCCTCCCCCTCCCCCTCCTGTTGAAGAGGTCACTGCCGTGCCCATTGTTCCAGCCGAAGTTCCTCCCTTGAAGCCTCTCACTAAACATAGAATTACCTCAACTTTTGCAAAATCTTTTACCATTGCGTCCCTTCAGCAATATACAAACAGCTTTTCACAAGAGAATCTTCTAGGAGAAGGAATGCTGGGGAGTGTTTATAGGGCACAGCTTCCCAGTGGGAAGTTACTGGCCGTCAAGAAACTGGATAAGAGAGCATTCAGTCAGCAAAAGGATGATGAATTTCTTGAGTTAGTGAATAATATCGATAGAATCAGGCATGCTAATGTGGTCGAGCTCAGTGGTTACTGTGCAGAGCATGGTGAAAGGCTTCTTATCTATGAGTATTGTAGTGGTGGAACATTGCAGGATGCACTGCACTCAGATGAAGAGTTCAGAAAGAAACTTTCGTGGAATGCCCGCATTAGAATGGCTCTTGGGGCTGCAAGAGCCTTGGAGTATCTGCATGAGGTCTGTCAGCCTCCTGTTATTCATAGGAATTTCAAGTCTGCGAATGTCCTACTTGATGATGATCTTTCAGTGCGTGTTTCAGATTGTGGGCTGGCTCCATTAATATCAAAAGGAGCTGTTAGTCAGCTATCTGGTCAGCTTCTGACAGCATATGGTTACGGAGCGCCAGAATTTGAATCAGGAGTTTATACACTTGAGAGTGACGTTTACAGCTTCGGTGTGGTTATGCTGGAACTTCTAACTGGCCGGATGTCTTATGACAGAACAAGGACCCGAGGTGAGCAGTTCCTAGTCAGGTGGGCGATTCCACAGCTTCACGACATAGAGGCATTGACAAGCATGGTTGATCCTTCACTCAATGGTCAATACCCTGCCAAATCCTTATCGTACTTTGCCGATATCATATCAAAATGTGTTCAGTCGGAGCCTGAATTCCGGCCACCAATGTCGTCGGTTGTTCAGGACTTGCTCAACATGATAAGGAGAGAACCACTTGGCAGTGGTTCAAAAGACGATGCGAAGATCTTCGAGCATCCAATGGTAACATGCTCAAGTTTTGCAAACCGAACTTGCCAGCCATTCGTCTTCTTCCTTTTGGTTTGTCTAAAGAGAACACTTTCTAGCAACAGAGCTCCAATTCTTGTGGCAGGTTCTCAGAGGTTCATCAACTTGCTTGCACAAACTCAGCCATGTCTTTGA 2553 44.81 MGWKRSSRNGNLRIWVQVLVGFVICAAQVLFGITNPGDFSAISSLHTALGLPSLPGWGIGQDPCGDAWQGVVCNDSSIIKIIINAANLGGELGDNLGLFSSIQTIDLSNNHIGGSIPSSLPVTMQNFFLSANEFTGSIPSSLSSLIQLTAMSLNDNKLSGQIPDSFEAISQLVNLDLSNNNLSGPLPPSVSNLLALTTLHLQNNQLSGTLDVLQDLPLKDLNIENNLFSGPIPEKVLSIPNFRKDGNPFNSSVSPTSPPVSPSPPSKPAPAPPVSGASPVSGAPPSSQQKPKKQADGPSAPEESSSGKNKKSTKRVVLITIAVVLSFIILVLACVLFMPRCRRRRVDSVSKRHQIGAYRGERENAGNQGAMPHTNDQIPKVPKEPVVRPKQETQTEVQKVPKDHEERKKNMPRMSAIPKKDHHEVDMSALDVYLMPPPPPPPPPPPPPPPPPPPPVEEVTAVPIVPAEVPPLKPLTKHRITSTFAKSFTIASLQQYTNSFSQENLLGEGMLGSVYRAQLPSGKLLAVKKLDKRAFSQQKDDEFLELVNNIDRIRHANVVELSGYCAEHGERLLIYEYCSGGTLQDALHSDEEFRKKLSWNARIRMALGAARALEYLHEVCQPPVIHRNFKSANVLLDDDLSVRVSDCGLAPLISKGAVSQLSGQLLTAYGYGAPEFESGVYTLESDVYSFGVVMLELLTGRMSYDRTRTRGEQFLVRWAIPQLHDIEALTSMVDPSLNGQYPAKSLSYFADIISKCVQSEPEFRPPMSSVVQDLLNMIRREPLGSGSKDDAKIFEHPMVTCSSFANRTCQPFVFFLLVCLKRTLSSNRAPILVAGSQRFINLLAQTQPCL 850
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1367315 1375236 + ClG42_02g0013200.10 Clacu02g0132 242200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu02g0132 850 MobiDBLite consensus disorder prediction 358 410 - -
Clacu02g0132 850 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 578 787 - -
Clacu02g0132 850 Pfam Protein tyrosine and serine/threonine kinase 503 774 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Clacu02g0132 850 Gene3D Phosphorylase Kinase; domain 1 471 577 - -
Clacu02g0132 850 MobiDBLite consensus disorder prediction 280 306 - -
Clacu02g0132 850 SUPERFAMILY Protein kinase-like (PK-like) 476 774 IPR011009 -
Clacu02g0132 850 MobiDBLite consensus disorder prediction 433 457 - -
Clacu02g0132 850 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 35 260 - -
Clacu02g0132 850 Pfam Leucine Rich Repeat 101 120 IPR001611 GO:0005515(InterPro)
Clacu02g0132 850 Pfam Leucine Rich Repeat 148 167 IPR001611 GO:0005515(InterPro)
Clacu02g0132 850 Pfam Leucine Rich Repeat 172 193 IPR001611 GO:0005515(InterPro)
Clacu02g0132 850 MobiDBLite consensus disorder prediction 432 457 - -
Clacu02g0132 850 SUPERFAMILY Formin homology 2 domain (FH2 domain) 445 455 - -
Clacu02g0132 850 MobiDBLite consensus disorder prediction 247 312 - -
Clacu02g0132 850 MobiDBLite consensus disorder prediction 255 279 - -
Clacu02g0132 850 SUPERFAMILY L domain-like 54 241 - -
Clacu02g0132 850 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 470 577 - -
Clacu02g0132 850 Gene3D Transferase(Phosphotransferase) domain 1 579 783 - -
Clacu02g0132 850 MobiDBLite consensus disorder prediction 383 410 - -
Clacu02g0132 850 ProSiteProfiles Protein kinase domain profile. 500 799 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Clacu02g0132 850 PANTHER LEUCINE RICH REPEAT KINASE 2 76 776 IPR051420 -
Clacu02g0132 850 Gene3D Ribonuclease Inhibitor 39 256 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g0132 Clacu-Chr2:1367315 Clacu08g0628 Clacu-Chr8:14696926 1.00E-102 dispersed
Clacu01g2355 Clacu-Chr1:34302513 Clacu02g0132 Clacu-Chr2:1367315 3.60E-145 wgd
Clacu10g2251 Clacu-Chr10:35413049 Clacu02g0132 Clacu-Chr2:1367315 7.20E-56 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73308 PF07714 PK_Tyr_Ser-Thr 1.70E-42 CL0016 Clacu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu02g0132 - - - 0.0