Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu02g0184 ATGGCCATTGGTCCAAAGTTTTTCTTCCTTTTCTTTATGAAGTTAATACTTGTATCATCTCTCTCAAATATTGTGGAAGCGCAAAATTTGACAGTCAGATTTTACCAGGATAGCTGTCCTGGAGTGGAGTATACTGTTGCCAAAACGGGTTGTGATGGTTCTGTGCTGCTAAATTCTACAACAAACAACCAAGCTGAGAAAGATGCATTTCCCAACCTTAGTTTAAGAGGTTTCAATGTCATTGACGCTGTTAAAGTTGCCGTCGAAAAGCAATGTCCCGGTGTCGTTTCTTGTGCTGATATCCTCGCTTTAATAGCTCGTGACGCAGTTAGAATGATTGGAGGGCCGCTGTGGGAAGTTCCAACAGGAAGAAGAGACGGAAGAGTATCGATCTCCAGAGAAGCGTTGATCAATTTGCCGCCTCCCTTCGCTAATATCTCTTCTCTCAAAACAAGTTTCCTCTCCAAAGGTCTTTCCGTCAAAGATCTGGTCGTTTTATCCGGATCACACACAATCGGAGTCTCTCACTGCACCTCCTTCTCCAACCGCCTCTACAATTTCACCGGCAAAGGCGACGCCGATCCTAAACTAGACAAATACTACGCCATCGCACTCAAGAACAAATGCAAGCCAAATGACCAGAAAACCATCGTCGAGATGGATCCTGGAAGCTTCAAGACCTTTGATCAAGGTTACTACACTCTCGTCTCCAAGAGAAGAGGATTGTTCCAGTCTGATTCCGCTCTTCTCGACGATCCTGATACCAAAGCCTACATTCTGCTTCAGGCCAGTACACGTGGAGCTACTTTCGCGGCTGATTTCGCCGAATCCATGGTGAATATGGGGAATATCGGCGTCCTCACCGGCACTGACGGCGAAATTAGGCGGCGATGTGCTTTTATTAACTGA 909 45.98 MAIGPKFFFLFFMKLILVSSLSNIVEAQNLTVRFYQDSCPGVEYTVAKTGCDGSVLLNSTTNNQAEKDAFPNLSLRGFNVIDAVKVAVEKQCPGVVSCADILALIARDAVRMIGGPLWEVPTGRRDGRVSISREALINLPPPFANISSLKTSFLSKGLSVKDLVVLSGSHTIGVSHCTSFSNRLYNFTGKGDADPKLDKYYAIALKNKCKPNDQKTIVEMDPGSFKTFDQGYYTLVSKRRGLFQSDSALLDDPDTKAYILLQASTRGATFAADFAESMVNMGNIGVLTGTDGEIRRRCAFIN 302
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1736607 1739076 - ClG42_02g0018400.10 Clacu02g0184 242252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu02g0184 302 PRINTS Haem peroxidase superfamily signature 96 113 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g0184 302 PRINTS Haem peroxidase superfamily signature 114 126 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g0184 302 PRINTS Haem peroxidase superfamily signature 162 177 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g0184 302 PRINTS Haem peroxidase superfamily signature 221 236 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g0184 302 PANTHER PEROXIDASE 25-RELATED 49 298 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Clacu02g0184 302 ProSitePatterns Peroxidases proximal heme-ligand signature. 162 172 IPR019793 -
Clacu02g0184 302 CDD secretory_peroxidase 29 301 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Clacu02g0184 302 Gene3D Peroxidase, domain 2 140 281 - -
Clacu02g0184 302 Pfam Peroxidase 35 260 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g0184 302 Gene3D - 49 302 - -
Clacu02g0184 302 ProSiteProfiles Plant heme peroxidase family profile. 50 302 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g0184 302 SUPERFAMILY Heme-dependent peroxidases 29 302 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g0184 302 PRINTS Plant peroxidase signature 161 173 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g0184 302 PRINTS Plant peroxidase signature 114 129 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g0184 302 PRINTS Plant peroxidase signature 276 289 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g0184 302 PRINTS Plant peroxidase signature 235 252 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g0184 302 PRINTS Plant peroxidase signature 219 234 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g0184 302 PRINTS Plant peroxidase signature 76 89 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g0184 302 PRINTS Plant peroxidase signature 95 105 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu02g0184 302 FunFam Peroxidase 140 281 - -
Clacu02g0184 302 FunFam Peroxidase 49 152 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g0182 Clacu-Chr2:1714456 Clacu02g0184 Clacu-Chr2:1736607 5.70E-88 dispersed
Clacu02g0184 Clacu-Chr2:1736607 Clacu02g0870 Clacu-Chr2:10519614 7.70E-85 dispersed
Clacu02g0183 Clacu-Chr2:1728775 Clacu02g0184 Clacu-Chr2:1736607 2.30E-148 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu02g0184 K00430 - csv:101219177 497.664