Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu02g0187 | ATGAGCCGTCGGATCAACTACGAGATTTTATCTGCACCGTCTGTTCGTCTCCGGATTCACATCTTTTTCTCCCGATTTGAGCACAACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCTGGGGCAAAAGAATACGTTCATGTGCGCATACAGCAACGTAACGGGAGAAAAAGCCTGACAACTGTCCAAGGATTGAAGAAGGAGTTCAGTTATAACAAGATACTCAAGGATCTGAAGAAGGAATTCTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTTATACAACTTCAGGGAGACCAAAGAAAGAATGTGTCTACCTTCCTTGTGCAGGCTGGCATTGTGAAGAAGGAGAACATCAAGATTCACGACCAAGTTATGGATCATTGGACCTTTTTAATTAATGATGATGCATTTCCTGCTTTCTCATCCCGATTGCGACATCTAACACATCATTTTATCGAATATGGTCCTGTATCTGCCCTTTGGTTTTACGCTCTTCGTCTCCGGATTCACACCTTTTTCTCTTGGGTTAGGGTTTCTCTTTTGTGCTTGCTTGTATTGTTTTTTCTGTTTCTGGGATCGAACCGCAAGATCCGTTTATTTTCTGGGATTTTTGAGGAGCTGAATTTAAGAGCCCATAATTTATTTGCTGGTTACCTGTGTTCTACTCCGGACAGCCAAGTTTCATACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCCGGAGCAAAAGAGTATGTTCATGTGCGTATACAGCAACGCAACGGGAGAAAAAGTCTGACAACTGTCCAAGGACTGAAGAAGGAATTTAGTTATAACAAGATTCTTAAGGACCTGAAGAAGGAATTTTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTTATACAACTTCAGGGAGACCAGAGAAAGAATGTATCTACCTTCCTTGTGCAGAGCATTGTTCAACCTTTCGCCCTGCTTTCTCGTCATCGAATTGTATTCTTAGCATTTTTATTCATTCATGAGACTGCTGCATTCGGGCACTATTCCCCAACTCCTGATTGA | 1074 | 43.39 | MSRRINYEILSAPSVRLRIHIFFSRFEHNPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHDQVMDHWTFLINDDAFPAFSSRLRHLTHHFIEYGPVSALWFYALRLRIHTFFSWVRVSLLCLLVLFFLFLGSNRKIRLFSGIFEELNLRAHNLFAGYLCSTPDSQVSYPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQSIVQPFALLSRHRIVFLAFLFIHETAAFGHYSPTPD | 357 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1750319 | 1756936 | + | ClG42_02g0018700.10 | Clacu02g0187 | 242255 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu02g0187 | 357 | FunFam | Eukaryotic translation initiation factor SUI1 | 17 | 129 | - | - | |
Clacu02g0187 | 357 | ProSiteProfiles | Translation initiation factor SUI1 family profile. | 253 | 323 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Clacu02g0187 | 357 | ProSiteProfiles | Translation initiation factor SUI1 family profile. | 47 | 117 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Clacu02g0187 | 357 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 | 29 | 127 | - | GO:0003723(PANTHER) | |
Clacu02g0187 | 357 | NCBIfam | translation initiation factor SUI1 | 233 | 322 | IPR005874 | GO:0003743(InterPro) | |
Clacu02g0187 | 357 | NCBIfam | translation initiation factor SUI1 | 28 | 127 | IPR005874 | GO:0003743(InterPro) | |
Clacu02g0187 | 357 | CDD | eIF1_SUI1 | 251 | 321 | IPR005874 | GO:0003743(InterPro) | |
Clacu02g0187 | 357 | CDD | eIF1_SUI1 | 45 | 127 | IPR005874 | GO:0003743(InterPro) | |
Clacu02g0187 | 357 | Gene3D | - | 18 | 128 | - | - | |
Clacu02g0187 | 357 | Gene3D | - | 225 | 329 | - | - | |
Clacu02g0187 | 357 | Pfam | Translation initiation factor SUI1 | 250 | 321 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Clacu02g0187 | 357 | Pfam | Translation initiation factor SUI1 | 44 | 118 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Clacu02g0187 | 357 | SUPERFAMILY | eIF1-like | 30 | 128 | IPR036877 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Clacu02g0187 | 357 | SUPERFAMILY | eIF1-like | 245 | 322 | IPR036877 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Clacu02g0187 | 357 | FunFam | Eukaryotic translation initiation factor SUI1 | 227 | 333 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu02g0187 | Clacu-Chr2:1750319 | Clacu09g1080 | Clacu-Chr9:10254417 | 2.90E-38 | dispersed | |
Clacu10g0518 | Clacu-Chr10:6273653 | Clacu02g0187 | Clacu-Chr2:1750319 | 5.60E-39 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu02g0187 | K03113 | - | csv:101219651 | 198.749 |