Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu02g0215 ATGTCGATGAAGGTCACCATGACCTCCGGCGGAATGCCTTCCATACCTTCATCGATTTCGCCGCCGCCGGTCACTTTACCGCTCAGAAATATCCCCGGCAGCTACGGTTTGCCGCTGTTCGGATCCATCGGTGACCGGCTGGATTACTTCTGGTTTCAAGGACCCGAGAAGTTCTTCAGGTCTCGGATGGAGAAGAATCAAAGTACGGTTTTCAGAACGAATGTTCCTCCGTCGTTCCCTTTCTTCTTCACCGATCCGAGAGTGATTGCGGTTCTGGATTGCAAGTCGTTTGCGCATCTATTCGACATGGAAATCGTGGAGAAGAAGAATGTTCTGGTCGGTGATTTCATGCCGAGCACAAGTTTCACCGGAAATATGAGAGTCTGTGCGTATTTGGATACGTCGGAATCTCAACACTCGAAGATAAAAAACTTCGTCATGGACGTTCTGCGGCGGAGCTCGAGGATTTGGATACAGGAGTTGGAATCGAACCTATCGACGATGTGGGACAGCATAGAATCCGAAATCGCAAAGGACACAAAATCCAGCTTCAGAAACCATCTCCAACCAACTCTTTTCAATTTCTTCTCCAAAACCCTGGCCGGCGCCGACACTGCAAAATCACCGGAAGTGGCTAAATCCGGCTACATCGACGTCATAATTTGGCTGGGGCTCCAGCTGGTCCCCACCATCCACATCGGCATTCTCCAACCCCTGGAAGAAATATTCCTCCACTCTTTCCGATTACCCTTCTTCCCCATCGCCTCTCGCTACCAAAGACTCTACGATTTCATCCAAAAAGAAGGGGAAGAAGTGGTTGAGCGAGGCGTTTCGGAGTTCGGGTTGACGAAGGATGAAGCAATTCACAATCTCATCTTCACCATGGGATTCAACGCCTACGGTGGTTTCAGTCTCTTCTTCCCGGTTCTACTCGATCGGATACTCAACGACAAAACCGGTTTACAACAGAGAATCCTCGAGGAAGTCAAGGCAAAAACCGGCTCCGGTCTGACATTCGAGTCAGTCAAGGAGATGGATCTCATCTACTCCGTCGTTTACGAGACACTCCGGCTTGACCCGCCGGTTCCAACCCAGTACGCGAGAGCCAGAAAGGATTTCAAGCTAAGTTCCTACGATTCAGCGTATAGCATCAAGAAAGGGGAGCTGCTTTGTGGGTATCAGCCGCTGGTGATGAGAGACCCGAAGGTGTTCGATGAACCGGAGACGTTTAATCCGGACCGGTTCCGGGGAGAGAAGGGGGCGGCGCTGCTGGATTATTTGTTCTGGTCGAACGGGCCGCAGACGGGACTGCCGAGCGAGCATAACAAGCAGTGCGCCGGGAAGGATTTGGTGGTGCTGACGGCAGTGGTGTTCGTGGCTTACATATTTCGAAGGTATGATTGGATTGCAGGGGAAGGAGGTTCGATTACAGCTCTTCAAAGGACCAACTGA 1452 51.24 MSMKVTMTSGGMPSIPSSISPPPVTLPLRNIPGSYGLPLFGSIGDRLDYFWFQGPEKFFRSRMEKNQSTVFRTNVPPSFPFFFTDPRVIAVLDCKSFAHLFDMEIVEKKNVLVGDFMPSTSFTGNMRVCAYLDTSESQHSKIKNFVMDVLRRSSRIWIQELESNLSTMWDSIESEIAKDTKSSFRNHLQPTLFNFFSKTLAGADTAKSPEVAKSGYIDVIIWLGLQLVPTIHIGILQPLEEIFLHSFRLPFFPIASRYQRLYDFIQKEGEEVVERGVSEFGLTKDEAIHNLIFTMGFNAYGGFSLFFPVLLDRILNDKTGLQQRILEEVKAKTGSGLTFESVKEMDLIYSVVYETLRLDPPVPTQYARARKDFKLSSYDSAYSIKKGELLCGYQPLVMRDPKVFDEPETFNPDRFRGEKGAALLDYLFWSNGPQTGLPSEHNKQCAGKDLVVLTAVVFVAYIFRRYDWIAGEGGSITALQRTN 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2049262 2058072 - ClG42_02g0021500.10 Clacu02g0215 242283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu02g0215 483 PANTHER CYTOCHROME P450 26 31 466 - GO:0016125(PANTHER)|GO:0016491(PANTHER)
Clacu02g0215 483 SUPERFAMILY Cytochrome P450 26 473 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0215 483 Gene3D Cytochrome P450 26 481 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0215 483 Pfam Cytochrome P450 320 470 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0215 483 CDD CYP74 60 475 - -
Clacu02g0215 483 PRINTS E-class P450 group IV signature 345 361 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0215 483 PRINTS E-class P450 group IV signature 445 463 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0215 483 PRINTS E-class P450 group IV signature 398 416 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0215 483 PRINTS E-class P450 group IV signature 382 396 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0215 483 FunFam Allene oxide synthase, chloroplastic 26 482 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g0215 Clacu-Chr2:2049262 Clacu08g1704 Clacu-Chr8:26607930 2.40E-104 dispersed
Clacu02g0215 Clacu-Chr2:2049262 Clacu02g0583 Clacu-Chr2:5633518 2.90E-110 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu02g0215 K10528 - csv:101223126 848.58