Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu02g0446 ATGAACCTCTCCCAGCTCCAACTCAACAATCTCTCCGTCGCCAAAGACCTCGGAAAGGCCTTTGGCCTCCTCGCCGGCCTCGCCTCCGACCGCTTCTCCACCTCCCTCCTGCTCCTCATCGGCTCCATCGAAGGCCTTATTGGCTACGGCGCTCAATGGCTCGTCGTCAGTCAAAAAATCAAACCACTCCCTTACTGGCAGATGTGTATATTTTTGTGTATGGGAGGGAATAGTACCACTTGGATGAACACCGGCGTGCTTGTTACTTGCCTGAGAAACTTCCGGCGAAACAGAGGCACTGTTTCCGGCATTCTCAAAGGCTACATCGCTCTCAGTACCGCCATTTTCACCGATCTTTGTACCGCTCTTTTCTCCGATAATCCCTCTTCTTTTCTCGCCCTCCTTTCCCTCACCCCCTTCGCCGTTTGTCTCACTGCTGTTCTCTTCCTCCGTGAAATCCCCTGTTCCGCCGATAACGAAACAGAGGACTCGAGATACTTCTGGGTACTCAACGCCGTTTCCGTCGCTGTCGCTGTCATTCTCTTAGCCTTCGATTCGATCCCAAATCCCACCTCGTCCGTATCGAGAATTTTCTCCATGGTGTTGCTGATTTTGCTAGCCTCACCTCTGGTAATCCCACTCCACTCGTTTGTCAAAAACAGGGGTCGGTCCGGTGAAGTTGCAGAGGCGTTGCTGGCGGACGAGAGTGCGGTGGAGGGTGCGGAAGAGGGGAAGCCGGTGATCGGAGAAGATCATACGATTGTTGAGGCGATGAAGACGGTTGAATTTTGGATTCTGTTTGGGTCGTTTCTGTGTGGAGTGGGAACGGGATTGGCAGTGATGAACAATATGGGACAGATTGGATTGGCTCTTGGATACGACGAGGTTTCGATTTTCATATCTCTGATGAGTATTTGGGGGTTTTTTGGCCGGATTTTATCGGGATCAGTGTCGGAGCATTTCATCAAGAAAGCAGGAATGCCAAGGCCACTATGGAACGCAGCTTCTCAAATTCTAATGGCACTTGGCTACATTCTCTTAGCCATTGCCATGCCTGGATCCTTATACATCGGCTCGGTTGTTGTCGGGATTTGCTATGGCGTCCGTCTTGCCATCACCGTCCCAATGGCCTCTGAAGTCTTCGGTCTCAAAAACTATGGCATGATCTACAATGTTCTAATCCTCAACCTCCCACTCGGTTCGTTCCTCTTCTCAGGACTGCTTGCCGGGATCCTCTATGATTGGGAGGCGACAACGACGAAGGAAGGCGGCAATATGTGTGTGGGAGGGCATTGTTATAGGCTTGTGTTTGTTGTAATGGCTTGTTCATGTGTGGTTGGGTTTGCCATGGACTTGTTTTTGGCCTTTAGAACCAAGAGGTTGTATTCCAAAATGAGGGGTCTAAAGGGATAA 1413 50.67 MNLSQLQLNNLSVAKDLGKAFGLLAGLASDRFSTSLLLLIGSIEGLIGYGAQWLVVSQKIKPLPYWQMCIFLCMGGNSTTWMNTGVLVTCLRNFRRNRGTVSGILKGYIALSTAIFTDLCTALFSDNPSSFLALLSLTPFAVCLTAVLFLREIPCSADNETEDSRYFWVLNAVSVAVAVILLAFDSIPNPTSSVSRIFSMVLLILLASPLVIPLHSFVKNRGRSGEVAEALLADESAVEGAEEGKPVIGEDHTIVEAMKTVEFWILFGSFLCGVGTGLAVMNNMGQIGLALGYDEVSIFISLMSIWGFFGRILSGSVSEHFIKKAGMPRPLWNAASQILMALGYILLAIAMPGSLYIGSVVVGICYGVRLAITVPMASEVFGLKNYGMIYNVLILNLPLGSFLFSGLLAGILYDWEATTTKEGGNMCVGGHCYRLVFVVMACSCVVGFAMDLFLAFRTKRLYSKMRGLKG 470
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4040062 4044104 + ClG42_02g0044600.10 Clacu02g0446 242514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu02g0446 470 Gene3D MFS general substrate transporter like domains 257 461 IPR036259 -
Clacu02g0446 470 CDD MFS_Mch1p_like 1 447 - -
Clacu02g0446 470 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 464 - GO:0016020(PANTHER)
Clacu02g0446 470 Pfam Nodulin-like 1 214 IPR010658 -
Clacu02g0446 470 SUPERFAMILY MFS general substrate transporter 20 460 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g0446 Clacu-Chr2:4040062 Clacu07g1236 Clacu-Chr7:27224077 2.90E-83 dispersed
Clacu02g0446 Clacu-Chr2:4040062 Clacu02g1212 Clacu-Chr2:24605836 3.80E-192 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu02g0446 - - - 0.0