Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu02g0457 ATGGACGAATCTGAGAAATTCGCTGAGAGTTTAGGTTCTCTGGAAATGTCGAATTCCTCTTCGAACTTGACCCAGAGCCAGAATGGGAATGTTAAAAACAATGATGCTTTATTCACAGTGGATGAGATTGAAGAAAGTGAGTTTTCGAAGCTATTGGATAGGCCAAGGCCGTTGAACATGGAGAGACAGAGGTCGTTTGATGAAAGATCGCTCGGGGATTTGGCGATTGGTTTTTCCCCACGGCTATCGACGAGAGTTTCTTCAGAGAACTTTGGTCGATTGACTGATTATTATGATCAAACTCCATCCCCCGGCAGAAAATCGGATTTCAATACTCCAAGATCACAGACTGGATTCGAGCAGCATCCTATGGTGGCTGAAGCTTGGGAAGCTTTGAGGCGTTCGTTGGTCCATTTCCGTGGACAACCAGTTGGTACTATTGCTGCGTTGGATTGTACTGAAGAAAATCTTAATTATGATCAAGTGTTTGTGAGAGACTTCGTCCCGAGCGCATTTGCTTTTCTAATGAATGGGGAGCCTGAAATAGTAAAAAACTTTATCTTAAAAACTCTTCGGCTTCAGTCATGGGAGAAAAAGATTGACAGATTCCAGCTTGGAGAAGGGGTGATGCCTGCTAGTTTCAAAGTGCTTCATGATCCAGTGAGGAATACTGAAACTTTAATTGCAGATTTTGGAGAGAGTGCAATAGGAAGAGTTGCTCCGGTTGACTCTGGATTTTGGTGGATTATATTGCTTAGAGCATACACAAAGTCCACTGGTGATACTTCCTTGGCTGAACTGCCAGAATGCCAAAAGGGAATGCGCCTTATTTTGAGTCTGTGTCTTTCAGAAGGGTTTGACACATTCCCAACCCTTCTCTGTGCTGATGGATGCTGCATGATTGATAGACGAATGGGTGTATATGGCTACCCAATTGAAATTCAAGCTCTTTTCTTTATGGCTTTAAGGTGTGCTTTGCTTTTACTTAAGCAAGACCACGAGGGGAAGGACTTTGTAGAAAGAATAACAAAACGGCTTCACGCCTTGAGCTATCACATGAGAACTTACTTTTGGCTCGACCTAAAGCAACTAAATGATATATACCGATATAAAACTGAAGAATACTCTCACACTGCTTTGAACAAGTTCAATGTAATACCTGATTCTCTTCCCGAATGGATTTTTGACTTCATGCCAACTCGTGGTGGTTACTTTATCGGAAACGTCAGCCCTGCAAGAATGGATTTCCGTTGGTTTTGCTTGGGAAACTGCATTGCAATTCTTTCTGCCTTGGCAACACCAGAGCAGTCCACTGCCATTATGGATCTTATTGAATCACGTTGGGAAGAGCTGGTCGGAGAAATGCCTTTAAAGGTTTGTTACCCTGCCATTGAAGGTCACGAGTGGCGGATTGTAACTGGGTGTGATCCAAAAAATACAAGATGGAGTTACCATAATGGTGGTTCTTGGCCAGTTCTCCTATGGCTTCTAACAGCTGCATGTATCAAGACCGGGCGACCCCAGATTGCGAGACGTGCACTCGAACTGGCTGAAACCAGGCTACTGAAAGACAACTGGCCAGAATATTATGATGGGACAGTTGGGCGGTACATTGGGAAACAGGCACGAAAGTTTCAGACGTGGTCGATTGCAGGTTATTTAGTGGCAAAGATGATGCTGGAAGACCCATCTCATTCAGGCATGGTGTCCTTGGAGGAAGACAAGCAGATGAAACCTTTGGTTTCGACGGGTTGGATAAGTTTTCGGTGCCTTCATGTACATCCTTATTATTTTGAGATAGGAGAGACATTACTAATGCAAAAGTGCTATGTGACATCAGCAGAAGATTGTTATGATCCCTTGGATCCTAATGGAAACATTACCATTACTTATGATATTCAAACTTGGACCACTCGTGGATATGTGGGGAGGGTCACTGTCCAAAACTACTACCAGTTCCGGCATGTGGAGAAGCCTGGTTGGAGGCTTGGGTGGACATGGACGAGGGGTGAAGTCATCTGGTCAATGAGTGGAGCTTTCGTGACTAAACAGGGAAATTGCTCATTGTTCAAATTTGATCCTCCACATTCCTGTGAGAAGAGCCCTGTCATTCTCGATCTCGTGTTGGAGGCATCATTGGAAAACAGGTCGGAGGGTTGTTGTCGCAGTGGGGTTCTTTCTGCTTGGGCTGTAGACCCTTCCAAATCTTTCTCTTCGTTTGAAATCTCAGTGGGGAGCATGGATGGAGATGGCAATGAGCAACCGCCCGCCAATATTACTCTCATGGCGCCTGGTCCTGGTTACACTTGCAGCCCCTTCTTGGACGCTCATCCAACTGTTTCTTCTCTGATTGATGGCAAAAGACAAGTTCAGGCTTTTAGAACATGGAAATCAACATGTACTTACTCCATATTTGTGTATAACAAGACACCACTCTGTTGTGTCTCACTCTCAGCATTTTACAATCCCTCCATCACACCTTGCCCTACATGCAGCTGTGGATGCAGAGAAGCAAACCAAACCTCTGTTCAATGTACAAGAGACAAACTCCAGTTGTCGACCACGGAATCGGCTAATCTTCTTGCCTCAGTACAGTGCTCGGATCACATGTGTCCGGTTCGAGTGCATTGGCATGTTAAGACGAACTACATCGACCACTGGAAGGTGAAACTCACAGTTTCCAACTACAACTATGACAGAAACTACTCAAACTGGAACATCCTAGTGCAGCATCCAGGATTTAGCCAATCAACAGAAGCATTTAGTTTCAATAGTTCACAACTTCCATCCGTCAGATATGGAGATGAGTTGGCTCTCTTTTGGGGCATTGAGTATTACAACACAGAGCTTGTGCAATCCACTGAGAGTAATGTAGGGTATGTGACAACAGATATTCTTCTTGAGAAAGATTTAGAATCATTCACATTAAGCAATGGTTGGGCCCTTCCAAGAAGAGTTTATTTCAATGGAGATAACTGTCAAATGCCTTTACCAGACACCTTCCCAATGCTACCAAATGGGAGTTCTAAGCAAAGCCTCTCACTTTTCATCTCCATTATTCTTTTTTTGACCTTTTTGTTTTGGTGA 3087 44.06 MDESEKFAESLGSLEMSNSSSNLTQSQNGNVKNNDALFTVDEIEESEFSKLLDRPRPLNMERQRSFDERSLGDLAIGFSPRLSTRVSSENFGRLTDYYDQTPSPGRKSDFNTPRSQTGFEQHPMVAEAWEALRRSLVHFRGQPVGTIAALDCTEENLNYDQVFVRDFVPSAFAFLMNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDPVRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDTSLAELPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYPIEIQALFFMALRCALLLLKQDHEGKDFVERITKRLHALSYHMRTYFWLDLKQLNDIYRYKTEEYSHTALNKFNVIPDSLPEWIFDFMPTRGGYFIGNVSPARMDFRWFCLGNCIAILSALATPEQSTAIMDLIESRWEELVGEMPLKVCYPAIEGHEWRIVTGCDPKNTRWSYHNGGSWPVLLWLLTAACIKTGRPQIARRALELAETRLLKDNWPEYYDGTVGRYIGKQARKFQTWSIAGYLVAKMMLEDPSHSGMVSLEEDKQMKPLVSTGWISFRCLHVHPYYFEIGETLLMQKCYVTSAEDCYDPLDPNGNITITYDIQTWTTRGYVGRVTVQNYYQFRHVEKPGWRLGWTWTRGEVIWSMSGAFVTKQGNCSLFKFDPPHSCEKSPVILDLVLEASLENRSEGCCRSGVLSAWAVDPSKSFSSFEISVGSMDGDGNEQPPANITLMAPGPGYTCSPFLDAHPTVSSLIDGKRQVQAFRTWKSTCTYSIFVYNKTPLCCVSLSAFYNPSITPCPTCSCGCREANQTSVQCTRDKLQLSTTESANLLASVQCSDHMCPVRVHWHVKTNYIDHWKVKLTVSNYNYDRNYSNWNILVQHPGFSQSTEAFSFNSSQLPSVRYGDELALFWGIEYYNTELVQSTESNVGYVTTDILLEKDLESFTLSNGWALPRRVYFNGDNCQMPLPDTFPMLPNGSSKQSLSLFISIILFLTFLFW 1028
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4138338 4149197 + ClG42_02g0045700.10 Clacu02g0457 242525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu02g0457 1028 PANTHER - 59 579 IPR024746 GO:0004575(PANTHER)|GO:0005987(PANTHER)|GO:0033926(InterPro)
Clacu02g0457 1028 MobiDBLite consensus disorder prediction 1 31 - -
Clacu02g0457 1028 MobiDBLite consensus disorder prediction 94 117 - -
Clacu02g0457 1028 MobiDBLite consensus disorder prediction 11 31 - -
Clacu02g0457 1028 FunFam probable alkaline/neutral invertase B 153 556 - -
Clacu02g0457 1028 SUPERFAMILY Six-hairpin glycosidases 128 556 IPR008928 GO:0005975(InterPro)
Clacu02g0457 1028 Pfam COBRA-like protein 641 803 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Clacu02g0457 1028 Pfam Alkaline and neutral invertase 128 563 IPR024746 GO:0033926(InterPro)
Clacu02g0457 1028 Gene3D - 153 558 IPR012341 GO:0005975(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g0457 Clacu-Chr2:4138338 Clacu09g1004 Clacu-Chr9:9506561 5.90E-270 dispersed
Clacu02g0457 Clacu-Chr2:4138338 Clacu07g1605 Clacu-Chr7:30624564 1.80E-117 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu02g0457 - - - 0.0