Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu02g0484 | ATGAAAATCGGTGTACAAGTAGTCATCGTCATCGTCGTCGTGAACTCTTCCGCCGTCGTCGGAGGGAGGTGGCTAACTTTCCGGCGAGGACATTGTCGAGCTTCCGGCCGGCTTGGAGTGATGACTTCCGATGAGATTGTGAGGGTGATTGTTTATGTTAATGATTGGGAGTTTGGAACTCAATTGGGCAACAACTGCGAAATGGGTGATACTGAAGATGCTAACACTGAGAACATGCGAAATCTTCAATGTTCGTATGGAGTATCTTCTTCTTCAGCTGGAAATCTTCCTTTCTCGATGGATCAACTTAAAATTTCCCAAATGAACTGCTCACAAATCCGTCCACCGCACTTTCAGTCAAATTTTCTTGCGGATAATAGTAGAAGAATTGGGATACCTCCTAGCCCCAACTCACCGCAGATCCCACCAATTTCACCGTATTCTCAGATCCCGATCTCGCGTCCGATGAATCAGCAAAATTATAACCCGGTGCCTACTCATTCCCGATCGTTGTCTCAGCCTTCTTTTTTCTCTCTCGATTCTTTGCCCCCTTTAAGCCCATCTCCATTTCGTGAATCCCCAACTACATCGAATTCAGATCAGGTTTCTGCAGATACATCAATGGAGGATAGGGATAACAGTTCACATTCTTTGTTGCCTCCCTCACCTTATATGAGGGCCAATTCTTCTAAGATGGGAGATTCTTTACCTCCTCGTAAAGCACATAGGCGGTCTAGTAGTGATATTCCATTTGGATTATCTTCAATGATTCAGCCATCTCCTCTTCTCCCATTCAATAGCTCTGGTGGATTGGAACGATCAATTAGTAGTAAAGAGAATGCTGGCTTATTAAAGCCCGCCAGCCAGTTTGTTAAAAGAGAACCTAGTTTGGAGAAAAGCGTTGACAACAATTTAGAAGGAATGGGTGAGAGGAAATCTGATGGGGACAGCGTGGACGACTTGTTTTCTGCTTATATGAATTTGGATAATATCGATTTGTTCAACTCTTCTGGGACTAACGACAAGAATGGTCAAGAGAATCGAGAGGATTTGGATAGTAGGGGTAGTGGAACAAAGACAAATGGGGGTGAGAGCAGTGATAATGAAGCAGAAAGCAGTGTAAATGAAAGCGGGGATAGCGCTCAAATGCCTGGATTGAATTCATCTGCTGAGAAGAGGGAAGGGATCAAACGGACCGCAGGGGGAGATATTGCTCCAACTACCAGACATTACCGAAGTGTCTCCATGGATAGTTTCATGGGCAAGTTGCAGTTTGGTGATGAGTCTCCCAAAATGCCTCCCACACCACCTGGCGTTCGCCCGGGGCAACTTTCTTCAAACAACTTAGTTGATGGTAATTCTGCTCCATTCAGTTTGGAGTTTGGTAATGGTGAGTTCAGTGGGGCTGAACTGAAGAAAATTATGGCAAATGACAAACTTGCCGAGATTGCTTTGACTGATCCCAAGCGTGCAAAGAGGATCTTGGCAAACCGTCAGTCTGCTGCTCGATCGAAAGAGCGAAAGATGCGGTATATATCTGAGTTGGAACACAAGGTTCAGACTCTTCAGACAGAAGCTACCACACTGTCCGCTCAACTCACACTTCTACAGAGAGATTCCGTGGGCCTTACAAACCAGAATAATGAACTGAAGTTTCGACTACAAGCCATGGAACAACAAGCACAACTACGGGATGCTCTTAACGAAGCCTTAACCGCGGAGGTTCAGAGATTGAAACTCGCTACAACAGAGCTAAATGCGCAGTCTCATCCCTCCAACGGAGTAATGCCCCAATCTTCCATCAATCACCATGGCCTACAGCTTCAGCTTCAGCACCAGCAACAACAACAGATCCAGCAGAATGGGAATGCAACCACAAAACCAGAATCCAACCAATAA | 1899 | 45.5 | MKIGVQVVIVIVVVNSSAVVGGRWLTFRRGHCRASGRLGVMTSDEIVRVIVYVNDWEFGTQLGNNCEMGDTEDANTENMRNLQCSYGVSSSSAGNLPFSMDQLKISQMNCSQIRPPHFQSNFLADNSRRIGIPPSPNSPQIPPISPYSQIPISRPMNQQNYNPVPTHSRSLSQPSFFSLDSLPPLSPSPFRESPTTSNSDQVSADTSMEDRDNSSHSLLPPSPYMRANSSKMGDSLPPRKAHRRSSSDIPFGLSSMIQPSPLLPFNSSGGLERSISSKENAGLLKPASQFVKREPSLEKSVDNNLEGMGERKSDGDSVDDLFSAYMNLDNIDLFNSSGTNDKNGQENREDLDSRGSGTKTNGGESSDNEAESSVNESGDSAQMPGLNSSAEKREGIKRTAGGDIAPTTRHYRSVSMDSFMGKLQFGDESPKMPPTPPGVRPGQLSSNNLVDGNSAPFSLEFGNGEFSGAELKKIMANDKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNNELKFRLQAMEQQAQLRDALNEALTAEVQRLKLATTELNAQSHPSNGVMPQSSINHHGLQLQLQHQQQQQIQQNGNATTKPESNQ | 632 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 4334410 | 4337437 | - | ClG42_02g0048400.10 | Clacu02g0484 | 242552 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu02g0484 | 632 | MobiDBLite | consensus disorder prediction | 334 | 410 | - | - | |
Clacu02g0484 | 632 | FunFam | probable transcription factor PosF21 | 488 | 541 | - | - | |
Clacu02g0484 | 632 | MobiDBLite | consensus disorder prediction | 150 | 182 | - | - | |
Clacu02g0484 | 632 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 487 | 550 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Clacu02g0484 | 632 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 223 | 620 | - | GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Clacu02g0484 | 632 | SUPERFAMILY | Leucine zipper domain | 489 | 540 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Clacu02g0484 | 632 | Coils | Coil | 568 | 588 | - | - | |
Clacu02g0484 | 632 | Coils | Coil | 505 | 560 | - | - | |
Clacu02g0484 | 632 | MobiDBLite | consensus disorder prediction | 356 | 387 | - | - | |
Clacu02g0484 | 632 | SMART | brlzneu | 485 | 549 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Clacu02g0484 | 632 | MobiDBLite | consensus disorder prediction | 423 | 449 | - | - | |
Clacu02g0484 | 632 | Pfam | bZIP transcription factor | 489 | 543 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Clacu02g0484 | 632 | MobiDBLite | consensus disorder prediction | 605 | 632 | - | - | |
Clacu02g0484 | 632 | Gene3D | - | 488 | 540 | - | - | |
Clacu02g0484 | 632 | MobiDBLite | consensus disorder prediction | 135 | 149 | - | - | |
Clacu02g0484 | 632 | MobiDBLite | consensus disorder prediction | 295 | 317 | - | - | |
Clacu02g0484 | 632 | MobiDBLite | consensus disorder prediction | 126 | 255 | - | - | |
Clacu02g0484 | 632 | MobiDBLite | consensus disorder prediction | 286 | 317 | - | - | |
Clacu02g0484 | 632 | CDD | bZIP_plant_RF2 | 490 | 539 | IPR044759 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu02g0484 | Clacu-Chr2:4334410 | Clacu08g0841 | Clacu-Chr8:18442680 | 5.80E-42 | dispersed | |
Clacu02g0484 | Clacu-Chr2:4334410 | Clacu02g0485 | Clacu-Chr2:4346630 | 6.60E-272 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
47197 | PF00170 | bZIP_1 | 9.70E-09 | CL0018 | Clacu | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu02g0484 | - | - | - | 0.0 |