Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu02g0502 | ATGGAGTTTCTAAACCCTTTTTCTGGGTTCTTCTTCTTCTTCTTTTCTCTTCTTCTCTTCGTCGCTTTTTTGCGAAATTTACATCCTAAATTTCGCTACCCGCCTGGCCCCGGCGGATTGCCCATCATCGGCAACATGCTGATGATGGACCAACTCACCCACCGTGGCCTCGCCCGTCTCGCCGCCATCTACGGTGGCCTCTTCCACCTCCGACTCGGCGTCCTCCACATGGTGGTTGTCTCCACGCCAGATATGGCACGAGAATTCCTCCAAGTTCAAGACGTAGCCTTCGCAAATAGGCCTGCAAACGTTGCGATCACATATCTCACCTACGATCGCGCCGATATGGCCTTTGCCAACTACGGCCCATTTTGGCGCCAAATGCGAAAGATTTGCGTCGTCAAGCTCTTCAGCCGCCGACGCGCAGAGTCATGGGCGTCGGTGCGTGACGAAGTCGACGCCCTAGTCGGAATGGTTTCAAGTAAAATGGGGCAACCGGTGAATATCGGTGACCTAGTTTTCAGCCTGACACGAAACATAACCTACAAGGCCGCGTTTGGATCGAGGTCGCACCATGGACAAGATGAGTTCGTTAACATCTTGCAAGAATTCTCTAAACTGTTTGGAGCTTTTAATATTGCAGATTTTTTGCCATGGTTGGGATGGATTCATGCTCGAGATTTCAATGAAAGAATGGCAAAAGCTAGAAGAGATCTTGATGTGTTCATAAATACCATAATTGATGAACATTTACAAAAGAAAATGAAGAAAAAGGGAAAAAATGAAGATGATGAAGAAGAAGATTCAGATATGGTTGATGAATTAATGGCATTCCTTGCTGATGAGTCAAGTAACAATGAGTTTGATGATTCACAATCAATTCTTAAGCTCACTACAGACAACATCAAAGCCATAATCATGGTAAATTTTCCACCTTATATATCTATATTGACAGTCCATGAATCGGACCTCCAAAATCTCCCCTACTTAAAATTTGCCATCAAAGAAACCCTCCGCCTTCATCCGCCAATTCCACTGCTCCTCCACGAGACTGCTGTTGACACCTCCGTCGCCGGCTACTTCATTCCAACCGGTTCAAGAGTCTGGATCAACGCTTGGGCAATCGGTCGAGACCGAACCGCTTGGGAAGAATCGGACCGTTTCTGGCCAGGGAGGTTTCAAAACGATGTTGCTCCAGATTTCAATGGGAGCAATTTCGAGTTCATCCCGTTCGGGTCGGGTCGGCGATCTTGTCCAGGAATGCAACTTGGACTTTATGCTTGTGAGATGGCGGTTGCAAATCTTGTTCATTGCTTTTCGTGGAAATTGCCGGACGGAATGAATGCCAATGAGCTCGATATGAATGACTCGTTCGGACTCACTGCTCCAAGAGCGATTCGACTCGTAGCCGTACCGGGTTTTCGACTTAACTCGCCTGAGTATGAACTCGAAGGGAAGAGACGGGAAGATGTATGA | 1476 | 47.36 | MEFLNPFSGFFFFFFSLLLFVAFLRNLHPKFRYPPGPGGLPIIGNMLMMDQLTHRGLARLAAIYGGLFHLRLGVLHMVVVSTPDMAREFLQVQDVAFANRPANVAITYLTYDRADMAFANYGPFWRQMRKICVVKLFSRRRAESWASVRDEVDALVGMVSSKMGQPVNIGDLVFSLTRNITYKAAFGSRSHHGQDEFVNILQEFSKLFGAFNIADFLPWLGWIHARDFNERMAKARRDLDVFINTIIDEHLQKKMKKKGKNEDDEEEDSDMVDELMAFLADESSNNEFDDSQSILKLTTDNIKAIIMVNFPPYISILTVHESDLQNLPYLKFAIKETLRLHPPIPLLLHETAVDTSVAGYFIPTGSRVWINAWAIGRDRTAWEESDRFWPGRFQNDVAPDFNGSNFEFIPFGSGRRSCPGMQLGLYACEMAVANLVHCFSWKLPDGMNANELDMNDSFGLTAPRAIRLVAVPGFRLNSPEYELEGKRREDV | 491 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 4595614 | 4598618 | - | ClG42_02g0050200.10 | Clacu02g0502 | 242570 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu02g0502 | 491 | PANTHER | CYTOCHROME P450 84A1-RELATED | 11 | 308 | IPR053062 | GO:0004497(PANTHER) | |
| Clacu02g0502 | 491 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 411 | 420 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Clacu02g0502 | 491 | Gene3D | Cytochrome P450 | 28 | 310 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0502 | 491 | SUPERFAMILY | Cytochrome P450 | 34 | 465 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0502 | 491 | PRINTS | E-class P450 group I signature | 331 | 349 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0502 | 491 | PRINTS | E-class P450 group I signature | 371 | 395 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0502 | 491 | PRINTS | E-class P450 group I signature | 85 | 106 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0502 | 491 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0502 | 491 | PRINTS | E-class P450 group I signature | 176 | 194 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0502 | 491 | PRINTS | E-class P450 group I signature | 408 | 418 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0502 | 491 | PRINTS | E-class P450 group I signature | 418 | 441 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0502 | 491 | Gene3D | Cytochrome P450 | 314 | 463 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0502 | 491 | Pfam | Cytochrome P450 | 34 | 308 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu02g0502 | 491 | Pfam | Cytochrome P450 | 319 | 464 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu02g0502 | Clacu-Chr2:4595614 | Clacu07g0891 | Clacu-Chr7:22297001 | 9.10E-152 | dispersed | |
| Clacu02g0502 | Clacu-Chr2:4595614 | Clacu01g2071 | Clacu-Chr1:32464644 | 8.70E-163 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu02g0502 | K09755 | - | csv:101217850 | 778.474 |