Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu02g0583 ATGACTTCATCTCCTTCCTCAGAACAGACACCGATTCCCCTGCCTCTGAAACCCATCCCCGGCAGCTATGGCTTCCCCATTTTCGGACCCATCAAAGATCGCTACGATTACTTCTACATCCAAGGCAGAGAAAAATTCTTCCGAACGAGAATGGCTAAATATAACTCCACTGTGTTCCGAGCCAACATGCCGCCGGGCCCCTTCATCTCTTCCGATTCTAAAGTCATCGTCCTTCTCGACGCCCACAGTTTTCCGATCCTCTTCGACACCACTAAAGTCGAGAAACGCAACGTTCTCGATGGAACTTACATGCCCTCCGTCGCCTTCACCGGCGGAATTCGTGCCTGTGCCTTCTTAGATCCCTCCGAAACAGAGCACTCTGTTCTCAAACGCCACTTCCTCAAATTTCTCGCCTCTCGTCATGACAAGTTCATTCCTCTGTTTCGAAGCTCCGTGTCGGAGATGTTCGATAAGCTCGAAAAGGAATTGGAAAAGAATAACGTCGCTAGTTTCAACCCCGTCAGCGATTCGGCCTCGTTCGATTTCATATTTCGATTGCTTTCCGATCGGAGCCCCGATGAGAAATTGAGCTCCGAGGGACCGGGTTTGGTCGATAAATGGCTCAGTATGCAGCTCGCTCCGTTAGCCACTCTCGGTTTGCCCAAATTTCTCACCTGCTTCGAAGATCTCATCATGCATACCTTCCGTTTACCGTTTGCACTCGTCAAAAGCGCTTACAGCAAGCTTTACGACTCATTTTACGAGTCGTCGGGTTCATTTCTAGACGAAGCAGAGAAGCAGGGGATAAACAGAGAGAAAGCATGTCATAATTTAGTGTTTCTAGCCGGATTCAACGCATACGCCGGAATGAAAGTGTTGTTACCGATTATACTAAACTGGGTCGGATCTGCCGGCGAGGGGCTTCATCTGAAACTCGCCGGCGAAATCAGAGCCGCCGTGAAGGAAGACGGAGGACTAACATTCAGCGCCTTAGAGAAGATGAGTCTGCTGAAATCCGTCGTGTACGAGGTTCTGAGGATCGACCCGCCGGTGCCTTACCAATACGCGAAGGCGAAACAGGATATTGTGATCGAGAGCCATGATTCTGCTTTCAAGATCAAGAAAGGGGAAATGATTTTTGGGTATCAGCCGATCGCGACGAAGGATCCGAAGGTGTTTGAGAATCCGGAGGAATTTGTGGGCGATAGGTTCATCGGAGAGAAAGGGGAGAAGCTTCTGAAGTATGTGTACTGGTCGAACGGCCGGGAGACGGAGGAGCCGACGACGGAGAACAAGCAGTGTCCGGCGAGGGATCTGGTGGTGCTAGTGTCCAGAGTAGTTCTGGTGGAACTTTTCCTCCGTTACGACACGTTCGCCGTCGAGGGAACTCGGTCATCGTTGGGTTGGTCCGTTAAGGTTAAATCGTTGACTAAAGCCTCATCGTAG 1446 50.55 MTSSPSSEQTPIPLPLKPIPGSYGFPIFGPIKDRYDYFYIQGREKFFRTRMAKYNSTVFRANMPPGPFISSDSKVIVLLDAHSFPILFDTTKVEKRNVLDGTYMPSVAFTGGIRACAFLDPSETEHSVLKRHFLKFLASRHDKFIPLFRSSVSEMFDKLEKELEKNNVASFNPVSDSASFDFIFRLLSDRSPDEKLSSEGPGLVDKWLSMQLAPLATLGLPKFLTCFEDLIMHTFRLPFALVKSAYSKLYDSFYESSGSFLDEAEKQGINREKACHNLVFLAGFNAYAGMKVLLPIILNWVGSAGEGLHLKLAGEIRAAVKEDGGLTFSALEKMSLLKSVVYEVLRIDPPVPYQYAKAKQDIVIESHDSAFKIKKGEMIFGYQPIATKDPKVFENPEEFVGDRFIGEKGEKLLKYVYWSNGRETEEPTTENKQCPARDLVVLVSRVVLVELFLRYDTFAVEGTRSSLGWSVKVKSLTKASS 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5633518 5635058 - ClG42_02g0058300.10 Clacu02g0583 242651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu02g0583 481 Pfam Cytochrome P450 311 417 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0583 481 CDD CYP74 48 474 - -
Clacu02g0583 481 FunFam Allene oxide synthase, chloroplastic 14 481 - -
Clacu02g0583 481 Gene3D Cytochrome P450 11 481 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0583 481 PRINTS E-class P450 group IV signature 371 385 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0583 481 PRINTS E-class P450 group IV signature 334 350 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0583 481 PRINTS E-class P450 group IV signature 387 405 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0583 481 PANTHER CYTOCHROME P450 26 19 455 - GO:0016125(PANTHER)|GO:0016491(PANTHER)
Clacu02g0583 481 SUPERFAMILY Cytochrome P450 14 464 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g0583 Clacu-Chr2:5633518 Clacu10g1250 Clacu-Chr10:25324106 2.10E-07 dispersed
Clacu02g0583 Clacu-Chr2:5633518 Clacu02g0584 Clacu-Chr2:5642251 6.90E-213 tandem
Clacu02g0215 Clacu-Chr2:2049262 Clacu02g0583 Clacu-Chr2:5633518 2.90E-110 transposed
Clacu02g0583 Clacu-Chr2:5633518 Clacu08g1704 Clacu-Chr8:26607930 3.20E-149 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu02g0583 K01723 - csv:101211574 857.44