Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu02g0584 ATGGCTTCTCCTTCTTCTTCCTCTGAACTTCCTCTCAAACCCATTCCTGGGGGCTATGGCTTCTCCTTCCTCGGTCCGATCAAAGACCGTTATGACTATTTCTACTTCCAAGGCAAAGATGAATTTTTCCGTTCCCGAATGACCAAATATCGCTCCACCGTCTTCCGCGCCAACATGCCGCCGGGCCCCTTCATCTCCTCCGATTCCAGAGTCATCGTACTTCTCGACGCCATCAGTTTTCCGATCCTCTTCGACACCACCAAGGTCGAAAAACGCAACATTCTCGATGGAACTTACATGCCCTCCTTGTCCTTCACCGGCGGCATTCGCACCTGCGCTTATTTGGACCCATCGGAAACAGAGCACTCTGTTCTCAAACGCCTCTTCCTCTCGTTTCTCGCCTCTCGTCATGACAGGTTCATCCCTCTGTTTCGAAGCTCCTTGTCTGAGATGTTCGTTAAGCTTGAAGATAAACTCGCGGAGAAGAAGAAATTCGCCGATTTCAACCCGATTAGTGATTCCATGTCGTTTGATTACATTTTCCGTCTACTCTCCGATGGAACTCCTGATTCAAAATTAGCCGCCGATGGACCTGGAATGTTCGATTTATGGCTTTCCTTTCAGCTCGCCCCACTGGCTTCCATTGGGGTTCCGAAAATTTTCACAGTTTTTGAAGATCTCATCATTCATACCATTCCCCTGCCTTTCTTTCCAGTCAAAAGTGGTTATAGGAAGCTTTACAATGCGTTTTACTCCTCCTCTGGAACATTTCTAGACGAAGCAGAAACACAGGGGATAGACAGAGAGAAAGCGTGTCACAATTTAGTGTTTCTCGCCGGATTCAACGCCTACGGCGGAATGAAAGTGCTTTTTCCAACTTTACTAAAATGGGTAGGCACCGCCGGCGAGGATCTCCACCGGAAGATCGCTGACGAAGTCAGAGCCACCGTGAAGGAAGAAGGTGGATTGACTTTCGCCGCCTTGGAGAAAATGAGTCTCCTGAAATCCGTCGTGTACGAGGCTCTGAGGATCGAGCCGCCGGTGCCGTTCCAGTATGGGAAGGCGAAGGAGGACATCGTGATTCAGAGCCATGATTCTTCTTTCAAGATCAAGAAAGGGGAGACGATTTTTGGTTATCAGCCATTTGCTACTAAAGATCCGAAGATTTTTGAGAATTCGGAGGAGTTCGTCGGTGATAGGTTCGTCGGAGAAGAAGGGGAGAAGCTTCTGAAATATGTTTACTGGTCAAACGACCGGGAGACGGTGCAGCCAACGGCGGAGAACAAGCAGTGTCCCGGGAAGAATCTGGTGGTGCTGATGGGCAGGATTATTCTGGTGGAATTCTTCCTCCGGTATGATACATTCACTGTCGACGTCACAGAGTTGCCGCTCGGTCCGGCGGTGAAGTTCAAGTCTCTAACCAAAGCCACCGAGTAA 1437 49.34 MASPSSSSELPLKPIPGGYGFSFLGPIKDRYDYFYFQGKDEFFRSRMTKYRSTVFRANMPPGPFISSDSRVIVLLDAISFPILFDTTKVEKRNILDGTYMPSLSFTGGIRTCAYLDPSETEHSVLKRLFLSFLASRHDRFIPLFRSSLSEMFVKLEDKLAEKKKFADFNPISDSMSFDYIFRLLSDGTPDSKLAADGPGMFDLWLSFQLAPLASIGVPKIFTVFEDLIIHTIPLPFFPVKSGYRKLYNAFYSSSGTFLDEAETQGIDREKACHNLVFLAGFNAYGGMKVLFPTLLKWVGTAGEDLHRKIADEVRATVKEEGGLTFAALEKMSLLKSVVYEALRIEPPVPFQYGKAKEDIVIQSHDSSFKIKKGETIFGYQPFATKDPKIFENSEEFVGDRFVGEEGEKLLKYVYWSNDRETVQPTAENKQCPGKNLVVLMGRIILVEFFLRYDTFTVDVTELPLGPAVKFKSLTKATE 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5642251 5645755 - ClG42_02g0058400.10 Clacu02g0584 242652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu02g0584 478 PANTHER CYTOCHROME P450 26 15 452 - GO:0016125(PANTHER)|GO:0016491(PANTHER)
Clacu02g0584 478 CDD CYP74 44 471 - -
Clacu02g0584 478 FunFam Allene oxide synthase, chloroplastic 10 478 - -
Clacu02g0584 478 PRINTS E-class P450 group IV signature 431 449 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0584 478 PRINTS E-class P450 group IV signature 384 402 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0584 478 PRINTS E-class P450 group IV signature 331 347 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0584 478 Gene3D Cytochrome P450 10 478 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0584 478 SUPERFAMILY Cytochrome P450 11 464 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0584 478 Pfam Cytochrome P450 305 415 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g0584 Clacu-Chr2:5642251 Clacu08g1704 Clacu-Chr8:26607930 1.90E-146 dispersed
Clacu02g0583 Clacu-Chr2:5633518 Clacu02g0584 Clacu-Chr2:5642251 6.90E-213 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu02g0584 K01723 - csv:101211324 879.782