Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu02g0632 ATGGAAGCTCTCTCTGTTACTCTTTACATAATAATATTCCTTTTTCTTTTTGCTTTCTTTTCCATTTCATTTCTTAAAAGAAATGGAAAGCCTAAATCCCAAAAAGCTCTTAGACTTCCTCCTGGTTCCATGGGATTGCCTTGGATTGGTGAAACTTTGCAACTTTATTCTCAAGACCCTAATATCTTTTTCTCACAAAAACAGAGAAGATATGGAGAAATTTTTAAGACCAACATTTTGGGATATCCTTGTGTGATGTTGGCAAGCGCCGCCGCAGCACGGTTCGTTCTGGTGACAAACGCCCATTTATTCCGGCCGACTTACCCGAAAAGCAAAGAGACCATGATCGGACCGGCGGCGCTTTTCTTCCACCAAGGAAATTACCATTCTAACCTCAGGAAACTCGTTCAAAATTCTTTATCTCTTGAACGACTCAGAATTCTTGTTCCTCATATTGAAGCCGCCGCCATTTCCGCCACCGATTCCTGGGCCGCCGCCGGCCACGTCATCAACACCTTCCTCGAAATGAAAAAGTTTTCTTTTGAGGTGGGAATTGTAGCAGTGTTTGGTAAGCTAGAAAATGAGTACAAAGAGAAGCTAAAAGAAAAGTATTGCATATTAGACAAAGGCTACAACTGTTTTCCAACCAAATTACCAGGAACAGCATATTCAAAAGCATTATCAGCAAGGAAGAAGCTGAGAGAGATTCTGGGAGAGATAATTATGGAGAGAAGAGAAAAAAGAGTAACAGAAAAAGATTTAGTGGGTCATCTTTTAAACTTCAGAGATGAAAATGGAGAATGTTTAAGTGAAGATCAAATCGCCGACAACATCATCGGAGTTCTCTTCGCCGCCCAAGACACCACCGCCACTGTCCTCACTTGGATTCTTAAATATCTTCATGACAACTTGAAGCTCTTTGAAGCCGTCAAGGCAGAGCAGATGGAAATTTATAGAAAAAATGGAGAGGGGAAGATGCCTCTGTCTTGGGCTCAAATTAAAGACATGCCCTTTACTCATAGGGTGGTATTAGAGAGCTTGAGAATGGCTAGCATCATATCTTTTACTTTTAGGGAGGCAGTTGTTGATGTGGAATATAAAGGGTATCTTATCCCAAAGGGTTGGAAGGTGATGCCCTTATTTAGGAATATTCATCACAACCATGAGTACTTCCCTGATCCTCATATCTTTGATCCCTCTAGATTTGAGGTGGCTCCAAGACCCAATACATTCATGCCATTTGGCAATGGAGTACATTCTTGCCCTGGCAATGAACTTGCCAAGCTGGAAATCCTCATCTTGCTTCATCACCTCATTACCAAATTTAGGTGGGAAGTTGTGGGATCACAAAGTGGGGTTGAATATGGGCCATTCCCAATGCCTGTGAAGATCCTAGAAGTTATGGTGATTTGCTTTGGGCTTGAGACTTTGTCTTCTATTAGTGTGTCGAATATTTTGGTGGAGTCTGATTACTTGGAGTGGGCTCAACCTCCTCAACTGGGCTTGTCTCTCTTGACTCCTACTGGGCTTGCACTCCTCAAGTAG 1545 42.2 MEALSVTLYIIIFLFLFAFFSISFLKRNGKPKSQKALRLPPGSMGLPWIGETLQLYSQDPNIFFSQKQRRYGEIFKTNILGYPCVMLASAAAARFVLVTNAHLFRPTYPKSKETMIGPAALFFHQGNYHSNLRKLVQNSLSLERLRILVPHIEAAAISATDSWAAAGHVINTFLEMKKFSFEVGIVAVFGKLENEYKEKLKEKYCILDKGYNCFPTKLPGTAYSKALSARKKLREILGEIIMERREKRVTEKDLVGHLLNFRDENGECLSEDQIADNIIGVLFAAQDTTATVLTWILKYLHDNLKLFEAVKAEQMEIYRKNGEGKMPLSWAQIKDMPFTHRVVLESLRMASIISFTFREAVVDVEYKGYLIPKGWKVMPLFRNIHHNHEYFPDPHIFDPSRFEVAPRPNTFMPFGNGVHSCPGNELAKLEILILLHHLITKFRWEVVGSQSGVEYGPFPMPVKILEVMVICFGLETLSSISVSNILVESDYLEWAQPPQLGLSLLTPTGLALLK 514
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 6219695 6227225 - ClG42_02g0063200.10 Clacu02g0632 242700
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Clacu02g0632 514 Pfam Cytochrome P450 40 447 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0632 514 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0632 514 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0632 514 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0632 514 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0632 514 FunFam Abscisic acid 8 29 471 - -
Clacu02g0632 514 SUPERFAMILY Cytochrome P450 34 454 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0632 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Clacu02g0632 514 PANTHER CYTOCHROME P450 26 38 453 - GO:0004497(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
Clacu02g0632 514 CDD CYP90-like 68 463 - -
Clacu02g0632 514 Gene3D Cytochrome P450 28 470 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0632 514 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0632 514 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0632 514 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0632 514 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0632 514 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu02g0632 514 PRINTS E-class P450 group I signature 340 358 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g0632 Clacu-Chr2:6219695 Clacu05g2182 Clacu-Chr5:30441181 9.70E-181 dispersed
Clacu02g0632 Clacu-Chr2:6219695 Clacu08g1754 Clacu-Chr8:26951111 5.30E-171 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu02g0632 K09843 - csv:101219389 843.573