Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu02g0635 ATGGGTATCTTTTCAAAGCAAAAAATCTGGAGAGCAGGAACGACCCATGATGATTCGATAGGTTTTAATGGGGTTTCTACAGCGAGCAAGAGGAAATGGACCCGTTTTTTGCCTCTGTTTGTGGCCATGGTGGTCATAGCAGAGATCGCTTCTCTTAGTCGGCTCGACATGGCGAAAAATGCGGCTATGGTGGATTCTTGGGTCGACTTGTTCTATGGATCTCCGCTTTTGCAAGAAGGCAATGAAATGTCTATTGATGATGGAGGAATTGATAGAGTTAGCTGTGAGGAGTGGCTGGAGAAGGAAGATGCTGTGGAGTATTCTAGGGACTTCAAAAGGAAACCTGTTTTGGTTTCTGGTTCCGAGAAGGAGTGGAGAACTTGTGATGTGGGATGCCAGTTTGGATTTAATCCTGGCCAGCAGCCTGATGCTATATTCGGATCACCTCATCAAGGTAGTGCTGCTAGTGTACTTCGATCCATGGAATCATCGCATTACTATCCAGAAAACAATATTGCTTTGGCAAGACGGAAGGGTTATACCGTGGTTATGACCACTAGTCTATCATCAGATGTTCCTGTTGGATATTTTTCATGGGCAGAATACGAGATAATGGCACCAGTGCAACCAAAAACGGAGCCTGCCCTTGCAGCTGCCTTCATTTCAAATTGTGGTGCCCGCAACTTCCGTTTGCAAGCTCTTGATGCGCTTGAGAAATTGAATGTCAAAATTGATTCATATGGTAGTTGCCACAGGAACCGCGATGGAAGAGTTGATAAAGTGGAAACTTTGAAGCGCTACAAGTTCAGCTTGGCTTTTGAGAATTCCAATGAGGAAGATTATGTTACGGAAAAGTTTTTTCAATCTCTTGTTGCAGGAACTATTCCGGTGGTGGTTGGCGCTCCAAACATTGAGGAGTTTGCTCCTTCTCCTGATTCATTTTTGCACATCAAGGAATTTTCGGATGTTGAGTCAATTGCCAAGTCCATGAAATACCTTGCTGAAAATCCCCAAATGTACAATCAATCGATAAGATGGAAGTATGACGGTCCATCTGAGTCTTTCAAGGCCCTTGTCGATATGGCAGCAGTACACTCATCATGCCGCCTTTGCATCCATATGGCAACCATCATCCACGAGAAAGAAGAAAACAGTCCCCGGTTCAAGAAACGGCCGTGCAAGTGTTCTCGAGGCTCTGATACCATGTATCATTTATACGTAAGGGAGAGAGGGAGGTTTGAAATGCAATCCATTTTCTTGAGGTCAGGAAATTTGACGTTGGAGGCTTTAGAATTGAGGGTACTCGAAAAGTTCAATTCTTTGAAACACGTACCAATTTGGAAGCAAGAACGGCCCGAAAGCATAAGAGGAGGAGATGAACTAAAACTATACAGAATATATCCTGTTGGGTTGACTCAGAGGCAGGCTTTATATACCTTCAGATTCAAAGACAATAATCATTTCAGAACTCACATAGAAACACACCCTTGTGCTAAGATGGAAGTCATATTTGTCTGA 1518 43.61 MGIFSKQKIWRAGTTHDDSIGFNGVSTASKRKWTRFLPLFVAMVVIAEIASLSRLDMAKNAAMVDSWVDLFYGSPLLQEGNEMSIDDGGIDRVSCEEWLEKEDAVEYSRDFKRKPVLVSGSEKEWRTCDVGCQFGFNPGQQPDAIFGSPHQGSAASVLRSMESSHYYPENNIALARRKGYTVVMTTSLSSDVPVGYFSWAEYEIMAPVQPKTEPALAAAFISNCGARNFRLQALDALEKLNVKIDSYGSCHRNRDGRVDKVETLKRYKFSLAFENSNEEDYVTEKFFQSLVAGTIPVVVGAPNIEEFAPSPDSFLHIKEFSDVESIAKSMKYLAENPQMYNQSIRWKYDGPSESFKALVDMAAVHSSCRLCIHMATIIHEKEENSPRFKKRPCKCSRGSDTMYHLYVRERGRFEMQSIFLRSGNLTLEALELRVLEKFNSLKHVPIWKQERPESIRGGDELKLYRIYPVGLTQRQALYTFRFKDNNHFRTHIETHPCAKMEVIFV 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6303238 6308850 - ClG42_02g0063500.10 Clacu02g0635 242703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu02g0635 505 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 108 381 - -
Clacu02g0635 505 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 63 477 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)|GO:0036065(PANTHER)|GO:0046920(PANTHER)
Clacu02g0635 505 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 215 376 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)
Clacu02g0635 505 Gene3D - 161 354 IPR038577 -
Clacu02g0635 505 FunFam Glycoprotein 3-alpha-L-fucosyltransferase A 162 354 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g0635 Clacu-Chr2:6303238 Clacu05g1164 Clacu-Chr5:10712947 2.40E-208 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu02g0635 K00753 - csv:101205170 973.0