Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu02g0667 ATGACCCTTTCATCCATTCCTTCAAAACCACGGCGATTTTCAGTTTCTCCGCTCCAGCTCCCTCTCTCTGTTCCTTCCTCCCACCTTCGAAACCCTAAATCCACATCTCTCCTTGAAAATTTCGCACCCTTTTTCGCCTTGGATTGTTCGGCTATCGTTGTTTTTTTTCTGGCTTTCGTTGTCTGTAGTTTTGAGATAATGATGACAGCGGCAGGTCATATCATGGATCCAAATTCTACTGATTCCTCAACATCACCTACTGTTAATTCCTCGGAAACTAAACCACCAGAAGTACAGCCTCAGGCTCCTGCTACCACTGGAATGGATAATGTAACCCGTGATGCACCGTCTAAGCTATCTCCTAGTGGCATAACTTCATGGGCCAAAAACTTGAAAATTTCTCAACCACAGTCAGCTTCACAAGATGGAACGACTGATAATGCTGCTGGGAAGTCAGCTTTTGCACGTTTTACTAGTGGCTTAGGTTTGAACTTATCTCCAAAATCTGCTGCTTCTAATGATTCCCCAGATGGAACTTCTAAACCTGCCCAACCCAGTTTTGTGGGATCAATTACAAGAGGATTGGTTGACTCTTCAAAGAGTGCTGTAAAGGCTGTACAAGTTAAAGCTCGTCATGTTGTCTCCCAAAATAAGCGAAGATACCAGGAAGGTGGATTTGATTTGGATATGACTTATATTACTGAAAATATCATTGCCATGGGTTTTCCTGCTGGTGACATGAGCTCAGGGTTTTTTGGATATGTTGAGGGTTTCTACAGGAACCATATGGAAGAAGTCATCAAGTTCTTTGAATCACATCACAAGGGAAAATACAAAGTATATAATCTTTGTTCCGAGAGGCTATATGATGCTTCATTATTTGAAGGAAAGGTGGCTTGTTTTCCTTTTGATGACCATAACTGTCCCCCACTTCAACTCATAATATCATTTTGCCAAAGTGCTTATTCATGGCTGAAGGATGATATTGAAAATGTAGTGGTTGTGCATTGCAAGGCAGGAATGGCCAGGACAGGCTTGATGATTTCCAGCCTTCTTCTGTTTCTGAAGTTCTTTCCAACCGCTGAAGAATCCATTGAATACTACAACCAGAGAAGGTGTTTTGATGGCAAAGGTCTGGTTTTACCAAGTCAGATTAGGTATGTCAAATATTTTGAGCGTATTCTAACATACTTCAATGGAGAAAATCCTCCCAGTCGCAGATGTGTGCTTAGAGGGTTTCGTCTCCACAGATGCCCATATTGGATCAGGCCTTCCATTACTGTATCTGACCATAATGGTGTTCTGTTCTCCACTAAAGTACATCCAAGAACCAAGAGTCTCTCGCCAGAAGATTTTTGGTTTACTGCACCAAAGAAGGGGATAATGGTCTTTGCCTTGCCTGGGGAGCCTGGTCTAGCTGAGTTATGTGGGGACTTCAAGGTTCATTTTCACGACCGCCAAGGAGATTTCTATTGTTGGCTAAACACAACCATGACCGAAAATCGGAAAATGCTGTACACGAATGATCTTGATGGGTTTGACAAGAGGAAACTACCTTCCCCCGGATTTCAGGTGGAGGTTGTTCTAGTTGATACGTCGCCCAACATGGACAATACTACCAAGAAGTCGGATGAAAGCTCAGGCTCAAGACCTTCTGCAGCTGATGGAAGTGAAGTTTCTGAGAACCAAAACAGAAAATCAGGAACTAATGATAGAGATGATGTATTTTCTGATAGTGAATCAGAAGGTGGTTCTTCAAAGAGCAAGAAGGAGGCAACTTCAGGTTCAGGGAATGATGGATCAGCTGTCAAGCCGGCATCTAAATCTCAAACAAGTACGACTTCATCAGATGATGTTGCGAGTTTAACACATGCAACAAAGCAAGTTTCCCTGGGAGATGGTGGAGCTAAACAGACTGCTCCTCCCAGTGATCGAAAAGGCGATGGAGCTGGAAGATCTGATTCTCTCCCAGAAGTTCCAAACTCAGAAAGTGAATTCAAGGCAATGGCTGCTGATGCTTCTGTTTTCACATTTGGCGACGACGAAGACTATGAGATTCCTTTGATTTGTACTCATTACTCAAGTCCTTGTGCTCTTGTTTCTTGCGTCAGTCAATGGCTTGAGTCTAAGCGTGAGCAACTGTCGAAGGAGACGCGGCATCGGCAATATAATTGCGAAAGAGAAGTTTCTGGGGATTCAATTTCTTCGCCCTCTACTCTCAACGATTTCTCAGGGAAGCTTCCGGAATCCGATTTGGTTCTTCTTTTGATTTCCTGGGTTACCATACTCTTTTGGATATTCTATTCTGCTTCTCTGAATTTGATTCAGTTTTTGTTTTGTGGGTTGTGCTCGAAATATTCTATTCTGGTTGGTTCCCTTCAGAAAAGGGGTCAACCTCTTGAAGTCACCGTTATTGGATGCACAAAGTTGAAAGATACGGAATGGATTTCAAGGCAGGATCCTTATGTGTGCCTTGAATATGGTAGTACAAAGTTTCGCACCACCACTTGCACAGATGGTGGAAGAAATCCCACATTCCAAGAGAAATTTGTGTTTTCTCTTATTGAAGGGCTAAGAGAGATTAATGTCACAGTTTGGAACAGCAATACAGTTACTTATGATGACTTCATTGGCAATGGAAAAATCCAATTGGCAAAAGTTCTGGCAGAAGGGTATGATGACAGTTCATGGTCACTTCAAACTAAAACTGGCAGACATGCTGGGGAAGTGCGACTGATCTTACATTTTGCAAATGCCAATAGACCGTCGTCAAGTTTTGCTCCCTCGGCACCACCATTTCATGCACCTACTCCACCCCAAGTCCCTGCATATGCTACGATGCCACCGGCACACCCGACAGCCTACCCTCCTCCTAGTGCTACACCGTATGCATCATTTCAATCTCCCTATCCTTCTTACCCACCCAGCTCTGGAGCATATCAAACATCCATGTACTCCCCATATCCATCTGGGTATCCTCCCACATCGTACCCGCTGCCTCCCTCGGGTTATCCTCCCAGTCCCTACCCACCACCTCCACAAGCCTCACCCTTCTATCCTCCAGGTCCTTATCCTGGAGTTTATCCCCCACCACAGTATTGA 3102 44.0 MTLSSIPSKPRRFSVSPLQLPLSVPSSHLRNPKSTSLLENFAPFFALDCSAIVVFFLAFVVCSFEIMMTAAGHIMDPNSTDSSTSPTVNSSETKPPEVQPQAPATTGMDNVTRDAPSKLSPSGITSWAKNLKISQPQSASQDGTTDNAAGKSAFARFTSGLGLNLSPKSAASNDSPDGTSKPAQPSFVGSITRGLVDSSKSAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFESHHKGKYKVYNLCSERLYDASLFEGKVACFPFDDHNCPPLQLIISFCQSAYSWLKDDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESIEYYNQRRCFDGKGLVLPSQIRYVKYFERILTYFNGENPPSRRCVLRGFRLHRCPYWIRPSITVSDHNGVLFSTKVHPRTKSLSPEDFWFTAPKKGIMVFALPGEPGLAELCGDFKVHFHDRQGDFYCWLNTTMTENRKMLYTNDLDGFDKRKLPSPGFQVEVVLVDTSPNMDNTTKKSDESSGSRPSAADGSEVSENQNRKSGTNDRDDVFSDSESEGGSSKSKKEATSGSGNDGSAVKPASKSQTSTTSSDDVASLTHATKQVSLGDGGAKQTAPPSDRKGDGAGRSDSLPEVPNSESEFKAMAADASVFTFGDDEDYEIPLICTHYSSPCALVSCVSQWLESKREQLSKETRHRQYNCEREVSGDSISSPSTLNDFSGKLPESDLVLLLISWVTILFWIFYSASLNLIQFLFCGLCSKYSILVGSLQKRGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGEVRLILHFANANRPSSSFAPSAPPFHAPTPPQVPAYATMPPAHPTAYPPPSATPYASFQSPYPSYPPSSGAYQTSMYSPYPSGYPPTSYPLPPSGYPPSPYPPPPQASPFYPPGPYPGVYPPPQY 1033
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 6651261 6663389 + ClG42_02g0066700.10 Clacu02g0667 242735
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Clacu02g0667 1033 MobiDBLite consensus disorder prediction 78 121 - -
Clacu02g0667 1033 SMART PTEN_C2_2 403 531 IPR014020 -
Clacu02g0667 1033 MobiDBLite consensus disorder prediction 528 663 - -
Clacu02g0667 1033 MobiDBLite consensus disorder prediction 531 564 - -
Clacu02g0667 1033 CDD PTP_PTEN 229 394 IPR045101 GO:0016791(InterPro)
Clacu02g0667 1033 MobiDBLite consensus disorder prediction 996 1033 - -
Clacu02g0667 1033 ProSiteProfiles C2 domain profile. 784 898 IPR000008 -
Clacu02g0667 1033 SMART C2_3c 799 896 IPR000008 -
Clacu02g0667 1033 ProSiteProfiles Phosphatase tensin-type domain profile. 219 398 IPR029023 -
Clacu02g0667 1033 MobiDBLite consensus disorder prediction 588 628 - -
Clacu02g0667 1033 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 206 624 IPR051281 GO:0005829(PANTHER)|GO:0016311(PANTHER)|GO:0016314(PANTHER)
Clacu02g0667 1033 ProSitePatterns Tyrosine specific protein phosphatases active site. 335 345 IPR016130 GO:0016311(InterPro)
Clacu02g0667 1033 MobiDBLite consensus disorder prediction 166 186 - -
Clacu02g0667 1033 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 333 372 IPR000387 GO:0016311(InterPro)
Clacu02g0667 1033 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 799 918 IPR035892 -
Clacu02g0667 1033 Gene3D C2 domain 798 918 IPR035892 -
Clacu02g0667 1033 CDD C2 800 897 - -
Clacu02g0667 1033 ProSiteProfiles C2 tensin-type domain profile. 405 532 IPR014020 -
Clacu02g0667 1033 Pfam C2 domain 800 895 IPR000008 -
Clacu02g0667 1033 Gene3D Protein tyrosine phosphatase superfamily 204 401 IPR029021 -
Clacu02g0667 1033 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 204 401 - -
Clacu02g0667 1033 Pfam PTEN2, C2 domain 406 532 - -
Clacu02g0667 1033 MobiDBLite consensus disorder prediction 565 587 - -
Clacu02g0667 1033 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 232 400 IPR029021 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu10g1527 Clacu-Chr10:28575918 Clacu02g0667 Clacu-Chr2:6651261 3.20E-41 transposed
Clacu01g1774 Clacu-Chr1:29928768 Clacu02g0667 Clacu-Chr2:6651261 3.90E-190 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu02g0667 K01110 - csv:101222304 1128.62