Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu02g0667 | ATGACCCTTTCATCCATTCCTTCAAAACCACGGCGATTTTCAGTTTCTCCGCTCCAGCTCCCTCTCTCTGTTCCTTCCTCCCACCTTCGAAACCCTAAATCCACATCTCTCCTTGAAAATTTCGCACCCTTTTTCGCCTTGGATTGTTCGGCTATCGTTGTTTTTTTTCTGGCTTTCGTTGTCTGTAGTTTTGAGATAATGATGACAGCGGCAGGTCATATCATGGATCCAAATTCTACTGATTCCTCAACATCACCTACTGTTAATTCCTCGGAAACTAAACCACCAGAAGTACAGCCTCAGGCTCCTGCTACCACTGGAATGGATAATGTAACCCGTGATGCACCGTCTAAGCTATCTCCTAGTGGCATAACTTCATGGGCCAAAAACTTGAAAATTTCTCAACCACAGTCAGCTTCACAAGATGGAACGACTGATAATGCTGCTGGGAAGTCAGCTTTTGCACGTTTTACTAGTGGCTTAGGTTTGAACTTATCTCCAAAATCTGCTGCTTCTAATGATTCCCCAGATGGAACTTCTAAACCTGCCCAACCCAGTTTTGTGGGATCAATTACAAGAGGATTGGTTGACTCTTCAAAGAGTGCTGTAAAGGCTGTACAAGTTAAAGCTCGTCATGTTGTCTCCCAAAATAAGCGAAGATACCAGGAAGGTGGATTTGATTTGGATATGACTTATATTACTGAAAATATCATTGCCATGGGTTTTCCTGCTGGTGACATGAGCTCAGGGTTTTTTGGATATGTTGAGGGTTTCTACAGGAACCATATGGAAGAAGTCATCAAGTTCTTTGAATCACATCACAAGGGAAAATACAAAGTATATAATCTTTGTTCCGAGAGGCTATATGATGCTTCATTATTTGAAGGAAAGGTGGCTTGTTTTCCTTTTGATGACCATAACTGTCCCCCACTTCAACTCATAATATCATTTTGCCAAAGTGCTTATTCATGGCTGAAGGATGATATTGAAAATGTAGTGGTTGTGCATTGCAAGGCAGGAATGGCCAGGACAGGCTTGATGATTTCCAGCCTTCTTCTGTTTCTGAAGTTCTTTCCAACCGCTGAAGAATCCATTGAATACTACAACCAGAGAAGGTGTTTTGATGGCAAAGGTCTGGTTTTACCAAGTCAGATTAGGTATGTCAAATATTTTGAGCGTATTCTAACATACTTCAATGGAGAAAATCCTCCCAGTCGCAGATGTGTGCTTAGAGGGTTTCGTCTCCACAGATGCCCATATTGGATCAGGCCTTCCATTACTGTATCTGACCATAATGGTGTTCTGTTCTCCACTAAAGTACATCCAAGAACCAAGAGTCTCTCGCCAGAAGATTTTTGGTTTACTGCACCAAAGAAGGGGATAATGGTCTTTGCCTTGCCTGGGGAGCCTGGTCTAGCTGAGTTATGTGGGGACTTCAAGGTTCATTTTCACGACCGCCAAGGAGATTTCTATTGTTGGCTAAACACAACCATGACCGAAAATCGGAAAATGCTGTACACGAATGATCTTGATGGGTTTGACAAGAGGAAACTACCTTCCCCCGGATTTCAGGTGGAGGTTGTTCTAGTTGATACGTCGCCCAACATGGACAATACTACCAAGAAGTCGGATGAAAGCTCAGGCTCAAGACCTTCTGCAGCTGATGGAAGTGAAGTTTCTGAGAACCAAAACAGAAAATCAGGAACTAATGATAGAGATGATGTATTTTCTGATAGTGAATCAGAAGGTGGTTCTTCAAAGAGCAAGAAGGAGGCAACTTCAGGTTCAGGGAATGATGGATCAGCTGTCAAGCCGGCATCTAAATCTCAAACAAGTACGACTTCATCAGATGATGTTGCGAGTTTAACACATGCAACAAAGCAAGTTTCCCTGGGAGATGGTGGAGCTAAACAGACTGCTCCTCCCAGTGATCGAAAAGGCGATGGAGCTGGAAGATCTGATTCTCTCCCAGAAGTTCCAAACTCAGAAAGTGAATTCAAGGCAATGGCTGCTGATGCTTCTGTTTTCACATTTGGCGACGACGAAGACTATGAGATTCCTTTGATTTGTACTCATTACTCAAGTCCTTGTGCTCTTGTTTCTTGCGTCAGTCAATGGCTTGAGTCTAAGCGTGAGCAACTGTCGAAGGAGACGCGGCATCGGCAATATAATTGCGAAAGAGAAGTTTCTGGGGATTCAATTTCTTCGCCCTCTACTCTCAACGATTTCTCAGGGAAGCTTCCGGAATCCGATTTGGTTCTTCTTTTGATTTCCTGGGTTACCATACTCTTTTGGATATTCTATTCTGCTTCTCTGAATTTGATTCAGTTTTTGTTTTGTGGGTTGTGCTCGAAATATTCTATTCTGGTTGGTTCCCTTCAGAAAAGGGGTCAACCTCTTGAAGTCACCGTTATTGGATGCACAAAGTTGAAAGATACGGAATGGATTTCAAGGCAGGATCCTTATGTGTGCCTTGAATATGGTAGTACAAAGTTTCGCACCACCACTTGCACAGATGGTGGAAGAAATCCCACATTCCAAGAGAAATTTGTGTTTTCTCTTATTGAAGGGCTAAGAGAGATTAATGTCACAGTTTGGAACAGCAATACAGTTACTTATGATGACTTCATTGGCAATGGAAAAATCCAATTGGCAAAAGTTCTGGCAGAAGGGTATGATGACAGTTCATGGTCACTTCAAACTAAAACTGGCAGACATGCTGGGGAAGTGCGACTGATCTTACATTTTGCAAATGCCAATAGACCGTCGTCAAGTTTTGCTCCCTCGGCACCACCATTTCATGCACCTACTCCACCCCAAGTCCCTGCATATGCTACGATGCCACCGGCACACCCGACAGCCTACCCTCCTCCTAGTGCTACACCGTATGCATCATTTCAATCTCCCTATCCTTCTTACCCACCCAGCTCTGGAGCATATCAAACATCCATGTACTCCCCATATCCATCTGGGTATCCTCCCACATCGTACCCGCTGCCTCCCTCGGGTTATCCTCCCAGTCCCTACCCACCACCTCCACAAGCCTCACCCTTCTATCCTCCAGGTCCTTATCCTGGAGTTTATCCCCCACCACAGTATTGA | 3102 | 44.0 | MTLSSIPSKPRRFSVSPLQLPLSVPSSHLRNPKSTSLLENFAPFFALDCSAIVVFFLAFVVCSFEIMMTAAGHIMDPNSTDSSTSPTVNSSETKPPEVQPQAPATTGMDNVTRDAPSKLSPSGITSWAKNLKISQPQSASQDGTTDNAAGKSAFARFTSGLGLNLSPKSAASNDSPDGTSKPAQPSFVGSITRGLVDSSKSAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFESHHKGKYKVYNLCSERLYDASLFEGKVACFPFDDHNCPPLQLIISFCQSAYSWLKDDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESIEYYNQRRCFDGKGLVLPSQIRYVKYFERILTYFNGENPPSRRCVLRGFRLHRCPYWIRPSITVSDHNGVLFSTKVHPRTKSLSPEDFWFTAPKKGIMVFALPGEPGLAELCGDFKVHFHDRQGDFYCWLNTTMTENRKMLYTNDLDGFDKRKLPSPGFQVEVVLVDTSPNMDNTTKKSDESSGSRPSAADGSEVSENQNRKSGTNDRDDVFSDSESEGGSSKSKKEATSGSGNDGSAVKPASKSQTSTTSSDDVASLTHATKQVSLGDGGAKQTAPPSDRKGDGAGRSDSLPEVPNSESEFKAMAADASVFTFGDDEDYEIPLICTHYSSPCALVSCVSQWLESKREQLSKETRHRQYNCEREVSGDSISSPSTLNDFSGKLPESDLVLLLISWVTILFWIFYSASLNLIQFLFCGLCSKYSILVGSLQKRGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGEVRLILHFANANRPSSSFAPSAPPFHAPTPPQVPAYATMPPAHPTAYPPPSATPYASFQSPYPSYPPSSGAYQTSMYSPYPSGYPPTSYPLPPSGYPPSPYPPPPQASPFYPPGPYPGVYPPPQY | 1033 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 6651261 | 6663389 | + | ClG42_02g0066700.10 | Clacu02g0667 | 242735 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu02g0667 | 1033 | MobiDBLite | consensus disorder prediction | 78 | 121 | - | - | |
| Clacu02g0667 | 1033 | SMART | PTEN_C2_2 | 403 | 531 | IPR014020 | - | |
| Clacu02g0667 | 1033 | MobiDBLite | consensus disorder prediction | 528 | 663 | - | - | |
| Clacu02g0667 | 1033 | MobiDBLite | consensus disorder prediction | 531 | 564 | - | - | |
| Clacu02g0667 | 1033 | CDD | PTP_PTEN | 229 | 394 | IPR045101 | GO:0016791(InterPro) | |
| Clacu02g0667 | 1033 | MobiDBLite | consensus disorder prediction | 996 | 1033 | - | - | |
| Clacu02g0667 | 1033 | ProSiteProfiles | C2 domain profile. | 784 | 898 | IPR000008 | - | |
| Clacu02g0667 | 1033 | SMART | C2_3c | 799 | 896 | IPR000008 | - | |
| Clacu02g0667 | 1033 | ProSiteProfiles | Phosphatase tensin-type domain profile. | 219 | 398 | IPR029023 | - | |
| Clacu02g0667 | 1033 | MobiDBLite | consensus disorder prediction | 588 | 628 | - | - | |
| Clacu02g0667 | 1033 | PANTHER | PHOSPHATASE WITH HOMOLOGY TO TENSIN | 206 | 624 | IPR051281 | GO:0005829(PANTHER)|GO:0016311(PANTHER)|GO:0016314(PANTHER) | |
| Clacu02g0667 | 1033 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 335 | 345 | IPR016130 | GO:0016311(InterPro) | |
| Clacu02g0667 | 1033 | MobiDBLite | consensus disorder prediction | 166 | 186 | - | - | |
| Clacu02g0667 | 1033 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 333 | 372 | IPR000387 | GO:0016311(InterPro) | |
| Clacu02g0667 | 1033 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 799 | 918 | IPR035892 | - | |
| Clacu02g0667 | 1033 | Gene3D | C2 domain | 798 | 918 | IPR035892 | - | |
| Clacu02g0667 | 1033 | CDD | C2 | 800 | 897 | - | - | |
| Clacu02g0667 | 1033 | ProSiteProfiles | C2 tensin-type domain profile. | 405 | 532 | IPR014020 | - | |
| Clacu02g0667 | 1033 | Pfam | C2 domain | 800 | 895 | IPR000008 | - | |
| Clacu02g0667 | 1033 | Gene3D | Protein tyrosine phosphatase superfamily | 204 | 401 | IPR029021 | - | |
| Clacu02g0667 | 1033 | FunFam | Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 | 204 | 401 | - | - | |
| Clacu02g0667 | 1033 | Pfam | PTEN2, C2 domain | 406 | 532 | - | - | |
| Clacu02g0667 | 1033 | MobiDBLite | consensus disorder prediction | 565 | 587 | - | - | |
| Clacu02g0667 | 1033 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 232 | 400 | IPR029021 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu10g1527 | Clacu-Chr10:28575918 | Clacu02g0667 | Clacu-Chr2:6651261 | 3.20E-41 | transposed | |
| Clacu01g1774 | Clacu-Chr1:29928768 | Clacu02g0667 | Clacu-Chr2:6651261 | 3.90E-190 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu02g0667 | K01110 | - | csv:101222304 | 1128.62 |